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Aliases for CHMP4BP1 Gene

Aliases for CHMP4BP1 Gene

  • Charged Multivesicular Body Protein 4B Pseudogene 1 2 3 4 5

External Ids for CHMP4BP1 Gene

Previous GeneCards Identifiers for CHMP4BP1 Gene

  • GC14P055767

Summaries for CHMP4BP1 Gene

GeneCards Summary for CHMP4BP1 Gene

CHMP4BP1 (Charged Multivesicular Body Protein 4B Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHMP4BP1 Gene

Genomics for CHMP4BP1 Gene

Regulatory Elements for CHMP4BP1 Gene

Enhancers for CHMP4BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G055301 1.4 FANTOM5 Ensembl ENCODE 0.7 +4.7 4699 4.2 ZNF146 CBX3 CEBPG FOSL1 FOSL2 ZNF600 PRDM10 NFE2 FOS SMARCE1 LOC105370509 FBXO34 ENSG00000259318 GCH1 LGALS3 MAPK1IP1L CHMP4BP1 ENSG00000258455
GH14G055297 0.9 Ensembl ENCODE 0.7 -0.3 -303 1.0 CTCF JUN CHD1 JUNB RAD21 SREBF1 NFIC FOXK2 KLF9 PRDM10 LOC105370509 FBXO34 DLGAP5 ENSG00000259318 CHMP4BP1 ENSG00000278818
GH14G055332 1.1 Ensembl ENCODE 0.3 +35.3 35301 3.6 FEZF1 TCF12 GATA2 EGR1 FOS TBX21 NFIC PRDM6 SMARCA4 GLIS1 LOC105370509 FBXO34 ENSG00000259318 ENSG00000258455 CHMP4BP1
GH14G055306 0.7 Ensembl ENCODE 0.4 +8.4 8374 1.0 PKNOX1 KLF1 SP7 ENSG00000259318 CHMP4BP1 ENSG00000258455
GH14G055315 0.7 ENCODE 0.4 +19.1 19077 4.0 BCOR PKNOX1 DPF2 ATF2 ZSCAN21 CTBP1 GATA3 ZNF316 RCOR1 EMSY LOC105370509 ENSG00000259318 CHMP4BP1 ENSG00000258455
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CHMP4BP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CHMP4BP1 Gene

Chromosome:
14
Start:
55,298,602 bp from pter
End:
55,299,496 bp from pter
Size:
895 bases
Orientation:
Plus strand

Genomic View for CHMP4BP1 Gene

Genes around CHMP4BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHMP4BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHMP4BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHMP4BP1 Gene

Proteins for CHMP4BP1 Gene

  • Protein details for CHMP4BP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P59074-CHM4P_HUMAN
    Recommended name:
    Putative charged multivesicular body protein 4B-like protein CHMP4BP1
    Protein Accession:
    P59074
    Secondary Accessions:
    • Q8NFA9

    Protein attributes for CHMP4BP1 Gene

    Size:
    171 amino acids
    Molecular mass:
    19069 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CHMP4BP1 Gene

Post-translational modifications for CHMP4BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHMP4BP1 Gene

Domains & Families for CHMP4BP1 Gene

Protein Domains for CHMP4BP1 Gene

Graphical View of Domain Structure for InterPro Entry

P59074

UniProtKB/Swiss-Prot:

CHM4P_HUMAN :
  • Belongs to the SNF7 family.
Family:
  • Belongs to the SNF7 family.
genes like me logo Genes that share domains with CHMP4BP1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for CHMP4BP1 Gene

Function for CHMP4BP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHMP4BP1 Gene

Localization for CHMP4BP1 Gene

Gene Ontology (GO) - Cellular Components for CHMP4BP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
genes like me logo Genes that share ontologies with CHMP4BP1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for CHMP4BP1 Gene

Pathways & Interactions for CHMP4BP1 Gene

SuperPathways for CHMP4BP1 Gene

No Data Available

Interacting Proteins for CHMP4BP1 Gene

Gene Ontology (GO) - Biological Process for CHMP4BP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007034 vacuolar transport IEA --
genes like me logo Genes that share ontologies with CHMP4BP1: view

No data available for Pathways by source and SIGNOR curated interactions for CHMP4BP1 Gene

Drugs & Compounds for CHMP4BP1 Gene

No Compound Related Data Available

Transcripts for CHMP4BP1 Gene

mRNA/cDNA for CHMP4BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHMP4BP1 Gene

No ASD Table

Relevant External Links for CHMP4BP1 Gene

GeneLoc Exon Structure for
CHMP4BP1
ECgene alternative splicing isoforms for
CHMP4BP1

Expression for CHMP4BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHMP4BP1 Gene

mRNA differential expression in normal tissues according to GTEx for CHMP4BP1 Gene

This gene is overexpressed in Whole Blood (x4.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CHMP4BP1 Gene



NURSA nuclear receptor signaling pathways regulating expression of CHMP4BP1 Gene:

CHMP4BP1
genes like me logo Genes that share expression patterns with CHMP4BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHMP4BP1 Gene

Orthologs for CHMP4BP1 Gene

Evolution for CHMP4BP1 Gene

ENSEMBL:
Gene Tree for CHMP4BP1 (if available)
TreeFam:
Gene Tree for CHMP4BP1 (if available)

No data available for Orthologs for CHMP4BP1 Gene

Paralogs for CHMP4BP1 Gene

(4) SIMAP similar genes for CHMP4BP1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CHMP4BP1: view

No data available for Paralogs for CHMP4BP1 Gene

Variants for CHMP4BP1 Gene

Relevant External Links for CHMP4BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHMP4BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHMP4BP1 Gene

Disorders for CHMP4BP1 Gene

No disorders were found for CHMP4BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHMP4BP1 Gene

Publications for CHMP4BP1 Gene

  1. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 3 64
  2. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R. … Weissenbach J. (Nature 2003) 4 64

Products for CHMP4BP1 Gene

Sources for CHMP4BP1 Gene

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