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Aliases for CHCHD2P9 Gene

Aliases for CHCHD2P9 Gene

  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 2 Pseudogene 9 2 3 5
  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 9 2 3
  • C9orf49 3 4
  • CHCHD9 3 4
  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain-Containing 2 Pseudogene 9 4

External Ids for CHCHD2P9 Gene

Previous HGNC Symbols for CHCHD2P9 Gene

  • C9orf49
  • CHCHD9

Previous GeneCards Identifiers for CHCHD2P9 Gene

  • GC09P082008

Summaries for CHCHD2P9 Gene

GeneCards Summary for CHCHD2P9 Gene

CHCHD2P9 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 2 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CHCHD2P9 Gene

Genomics for CHCHD2P9 Gene

Regulatory Elements for CHCHD2P9 Gene

Enhancers for CHCHD2P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F079390 0.5 ENCODE 0.8 -0.7 -722 0.9 ZBTB40 MAFK TRIM28 CHCHD2P9 GC09P079256
GH09F079382 0.7 Ensembl ENCODE 0.4 -8.5 -8521 0.7 FOS TRIM28 CHCHD2P9 GC09P079256
GH09F079360 0.7 Ensembl ENCODE 0.3 -30.3 -30332 0.9 JUND POU5F1 CHCHD2P9 GC09P079256
GH09F079362 0.6 ENCODE 0.3 -28.9 -28927 0.2 RFX1 JUND REST FOS FOSL2 TCF7L2 TRIM28 CHCHD2P9 GC09P079256
GH09F079383 0.4 ENCODE 0.4 -7.0 -6971 1.1 TRIM28 CHCHD2P9 GC09P079256
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CHCHD2P9 on UCSC Golden Path with GeneCards custom track

Promoters for CHCHD2P9 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001909979 133 400

Genomic Location for CHCHD2P9 Gene

Chromosome:
9
Start:
79,391,267 bp from pter
End:
79,392,040 bp from pter
Size:
774 bases
Orientation:
Plus strand

Genomic View for CHCHD2P9 Gene

Genes around CHCHD2P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHCHD2P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHCHD2P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHCHD2P9 Gene

Proteins for CHCHD2P9 Gene

  • Protein details for CHCHD2P9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T1J5-CHCH9_HUMAN
    Recommended name:
    Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial
    Protein Accession:
    Q5T1J5

    Protein attributes for CHCHD2P9 Gene

    Size:
    151 amino acids
    Molecular mass:
    15490 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CHCHD2P9 Gene

Post-translational modifications for CHCHD2P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHCHD2P9 Gene

Domains & Families for CHCHD2P9 Gene

Protein Domains for CHCHD2P9 Gene

Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for CHCHD2P9 Gene

Graphical View of Domain Structure for InterPro Entry

Q5T1J5

UniProtKB/Swiss-Prot:

CHCH9_HUMAN :
  • Contains 1 CHCH (coiled coil-helix-coiled coil-helix) domain.
Domain:
  • Contains 1 CHCH (coiled coil-helix-coiled coil-helix) domain.
genes like me logo Genes that share domains with CHCHD2P9: view

No data available for Gene Families for CHCHD2P9 Gene

Function for CHCHD2P9 Gene

Phenotypes for CHCHD2P9 Gene

GenomeRNAi human phenotypes for CHCHD2P9:
genes like me logo Genes that share phenotypes with CHCHD2P9: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHCHD2P9 Gene

Localization for CHCHD2P9 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CHCHD2P9 Gene

Mitochondrion.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CHCHD2P9 Gene

Pathways & Interactions for CHCHD2P9 Gene

SuperPathways for CHCHD2P9 Gene

No Data Available

Interacting Proteins for CHCHD2P9 Gene

Selected Interacting proteins: Q5T1J5-CHCH9_HUMAN for CHCHD2P9 Gene via IID

Symbol External ID(s) Details
YBX1

Gene Ontology (GO) - Biological Process for CHCHD2P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHCHD2P9 Gene

Transcripts for CHCHD2P9 Gene

mRNA/cDNA for CHCHD2P9 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CHCHD2P9 Gene

No ASD Table

Relevant External Links for CHCHD2P9 Gene

GeneLoc Exon Structure for
CHCHD2P9
ECgene alternative splicing isoforms for
CHCHD2P9

Expression for CHCHD2P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CHCHD2P9 Gene

Protein differential expression in normal tissues from HIPED for CHCHD2P9 Gene

This gene is overexpressed in Heart (59.1) and Skin (9.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CHCHD2P9 Gene



Protein tissue co-expression partners for CHCHD2P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of CHCHD2P9 Gene:

CHCHD2P9
genes like me logo Genes that share expression patterns with CHCHD2P9: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for CHCHD2P9 Gene

Orthologs for CHCHD2P9 Gene

Evolution for CHCHD2P9 Gene

ENSEMBL:
Gene Tree for CHCHD2P9 (if available)
TreeFam:
Gene Tree for CHCHD2P9 (if available)

No data available for Orthologs for CHCHD2P9 Gene

Paralogs for CHCHD2P9 Gene

(2) SIMAP similar genes for CHCHD2P9 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CHCHD2P9: view

No data available for Paralogs for CHCHD2P9 Gene

Variants for CHCHD2P9 Gene

Relevant External Links for CHCHD2P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHCHD2P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHCHD2P9 Gene

Disorders for CHCHD2P9 Gene

No disorders were found for CHCHD2P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHCHD2P9 Gene

Publications for CHCHD2P9 Gene

  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 64

Products for CHCHD2P9 Gene

Sources for CHCHD2P9 Gene

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