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Aliases for CHCHD2P8 Gene

Subcategory (RNA class) for CHCHD2P8 Gene

lncRNA

Aliases for CHCHD2P8 Gene

  • Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 2 Pseudogene 8 2 3 5
  • HCG1790806 3

External Ids for CHCHD2P8 Gene

ORGUL Members for CHCHD2P8 Gene

Previous GeneCards Identifiers for CHCHD2P8 Gene

  • GC13P028683

Summaries for CHCHD2P8 Gene

GeneCards Summary for CHCHD2P8 Gene

CHCHD2P8 (Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 2 Pseudogene 8) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for CHCHD2P8 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

Additional gene information for CHCHD2P8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for CHCHD2P8 Gene

Genomics for CHCHD2P8 Gene

Regulatory Elements for CHCHD2P8 Gene

Enhancers for CHCHD2P8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H027617 1.4 ENCODE dbSUPER 25.6 -486.9 -486893 5 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B POLR1D CHCHD2P8 PAN3 WASF3-AS1 LNX2 RNU6-63P
GH13H028102 0.4 Ensembl 0.4 -5.3 -5331 0 HLF FLT3 CHCHD2P8
GH13H028126 0.3 FANTOM5 0.4 +18.7 18734 0 PAN3 CHCHD2P8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CHCHD2P8 on UCSC Golden Path with GeneCards custom track

Genomic Location for CHCHD2P8 Gene

Chromosome:
13
Start:
28,107,431 bp from pter
End:
28,107,877 bp from pter
Size:
447 bases
Orientation:
Plus strand

Genomic View for CHCHD2P8 Gene

Genes around CHCHD2P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CHCHD2P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CHCHD2P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CHCHD2P8 Gene

ORGUL Member Location for CHCHD2P8 Gene

ORGUL Member Location for CHCHD2P8 gene

Proteins for CHCHD2P8 Gene

Post-translational modifications for CHCHD2P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CHCHD2P8 Gene

Domains & Families for CHCHD2P8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CHCHD2P8 Gene

Function for CHCHD2P8 Gene

Phenotypes From GWAS Catalog for CHCHD2P8 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CHCHD2P8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CHCHD2P8 Gene

Localization for CHCHD2P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CHCHD2P8 Gene

Pathways & Interactions for CHCHD2P8 Gene

SuperPathways for CHCHD2P8 Gene

No Data Available

Interacting Proteins for CHCHD2P8 Gene

Gene Ontology (GO) - Biological Process for CHCHD2P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CHCHD2P8 Gene

Drugs & Compounds for CHCHD2P8 Gene

No Compound Related Data Available

Transcripts for CHCHD2P8 Gene

mRNA/cDNA for CHCHD2P8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for CHCHD2P8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CHCHD2P8 Gene

No ASD Table

Relevant External Links for CHCHD2P8 Gene

GeneLoc Exon Structure for
CHCHD2P8
ECgene alternative splicing isoforms for
CHCHD2P8

Expression for CHCHD2P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CHCHD2P8 Gene

mRNA differential expression in normal tissues according to GTEx for CHCHD2P8 Gene

This gene is overexpressed in Testis (x37.8), Brain - Cerebellum (x7.8), and Brain - Cerebellar Hemisphere (x7.3).

NURSA nuclear receptor signaling pathways regulating expression of CHCHD2P8 Gene:

CHCHD2P8
genes like me logo Genes that share expression patterns with CHCHD2P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CHCHD2P8 Gene

Orthologs for CHCHD2P8 Gene

Evolution for CHCHD2P8 Gene

ENSEMBL:
Gene Tree for CHCHD2P8 (if available)
TreeFam:
Gene Tree for CHCHD2P8 (if available)

No data available for Orthologs for CHCHD2P8 Gene

Paralogs for CHCHD2P8 Gene

No data available for Paralogs for CHCHD2P8 Gene

Variants for CHCHD2P8 Gene

Relevant External Links for CHCHD2P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CHCHD2P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CHCHD2P8 Gene

Disorders for CHCHD2P8 Gene

No disorders were found for CHCHD2P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CHCHD2P8 Gene

Publications for CHCHD2P8 Gene

  1. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson SL … O'Brien SJ (PloS one 2010) 3 60
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for CHCHD2P8 Gene

Sources for CHCHD2P8 Gene

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