CHCHD10 Gene
protein-coding GIFtS : 40
GCID: GC22 M024109
coiled-coil-helix-coiled-coil-helix domain containing 1... (Previous name: chromosome 22 open reading frame 16 ) (Previous symbol: C22orf16 )
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Aliasesfor CHCHD10 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Coiled-Coil-Helix-Coiled-Coil-Helix Domain Containing 10 1 2 C22orf161 2 3 N27C7-41 2 Protein N27C7-42 3 Chromosome 22 Open Reading Frame 161 Coiled-Coil-Helix-Coiled-Coil-Helix Domain-Containing Protein 10, Mitochondrial2
Export aliases for CHCHD10 gene to outside databases Previous GC identifers: GC22M022438 GC22M007096
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Summariesfor CHCHD10 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section --
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Genomic Viewsfor CHCHD10 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000022.10 NC_018933.1 NT_011520.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CHCHD10 gene promoter: Egr-3 AML1a p53 p300 MZF-1 CREB HOXA5 ARP-1 Meis-1a Other transcription factors Search SABiosciences Chromatin IP Primers for CHCHD10 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHCHD10
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 22q11.23 Ensembl cytogenetic band: 22q11.23 HGNC cytogenetic band: 22q11.23 CHCHD10 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 22 GeneLoc Exon Structure
GeneLoc location for GC22M024109: view genomic region
(about GC identifiers )
Start:
24,108,021 bp from pter
End:
24,110,630 bp from pter
Size:
2,610 bases
Orientation:
minus strand
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Proteinsfor CHCHD10 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CHC10_HUMAN, Q8WYQ3 (See
protein sequence )Recommended Name: Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial precursor Size : 142 amino acids; 14149 Da
Subcellular location : Mitochondrion (Potential)
Secondary accessions : A8K0J5Explore the universe of human proteins at neXtProt for CHCHD10: NX_Q8WYQ3 CHCHD10 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_998885.1 ENSEMBL proteins: ENSP00000430042 ENSP00000384973 ENSP00000418428 ENSP00000429411 ENSP00000429976 Human Recombinant Protein Products for CHCHD10: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005739 mitochondrion
IDA --
CHCHD10 for ontologies About GeneDecksing CHCHD10 Antibody Products: Assay Products for CHCHD10:
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Protein
Domains / Familiesfor CHCHD10 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CHCHD10 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q8WYQ3 ProtoNet protein and cluster: Q8WYQ3
1 Blocks protein family : IPB010625 CHCH UniProtKB/Swiss-Prot: CHC10_HUMAN, Q8WYQ3 Similarity : Contains 1 CHCH domain
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Functionfor CHCHD10 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003674 molecular_function
ND --
CHCHD10 for ontologies About GeneDecksing Phenotypes: 4 GenomeRNAi human phenotypes for CHCHD10 :Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CHCHD10 (NM_213720 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CHCHD10 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CHCHD10
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Pathways & Interactionsfor CHCHD10 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CHCHD10 Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006119 oxidative phosphorylation
IMP -- GO:0006754 ATP biosynthetic process
IMP -- GO:2000984 negative regulation of ATP citrate synthase activity
IMP --
CHCHD10 for ontologies About GeneDecksing
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Drugs & Compoundsfor CHCHD10 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for CHCHD10 Search CenterWatch for drugs/clinical trials and news about CHCHD10 / CHC10
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Transcriptsfor CHCHD10 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CHCHD10 gene: NM_213720.1 Unigene Cluster for CHCHD10:
Coiled-coil-helix-coiled-coil-helix domain containing 10 Hs.66915 [show with all ESTs ] Unigene Representative Sequence: BM913730 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000520222 ENST00000401675 ENST00000484558 (uc002zxw.3 ) ENST00000521886 ENST00000523865 ENST00000517886 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CHCHD10 (NM_213720 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CHCHD10 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CHCHD10
Additional cDNA sequence: AK289560.1 BC053570.1 BC065232.1
10 DOTS entries : DT.95286692 DT.99991967
DT.97854234 DT.100029788 DT.95162988 DT.97791734 DT.91729410 DT.91973812 DT.95162987 DT.95162990 24/339 AceView cDNA sequences (see all 339 ):
AJ571994 AI253230 AA384942 AW779934 AI985252 BQ221514 AI201628 AI825600 AJ574577 BI517638 AA384858 AA295581 AA211613 CR594120 BU728410 BI711464 AI620416 AI356525 BC065232 BM310585 AI660959 BM708715 BC053570 BU078826 GeneLoc Exon Structure
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Expression for CHCHD10 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CHCHD10 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GTCTGAGCTCAbout this image CHCHD10 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See CHCHD10 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CHCHD10 SOURCE GeneReport for Unigene cluster: Hs.66915 SABiosciences Custom PCR Arrays for CHCHD10 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CHCHD10Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CHCHD10 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CHCHD10 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CHCHD10
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Orthologsfor CHCHD10 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals and fungi.
Orthologs for CHCHD10 gene from 7/22 species (see all 22 ) About this table
ENSEMBL Gene Tree for CHCHD10 (if available)TreeFam Gene Tree for CHCHD10 (if available)
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Paralogsfor CHCHD10 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CHCHD10 gene CHCHD2 2 2 SIMAP similar genes for CHCHD10 using alignment to 4 protein entries: CHC10_HUMAN (see all proteins ):CHCHD2 CHCHD2P9
CHCHD10 for paralogs About GeneDecksing 2 Pseudogenes.org Pseudogenes for CHCHD10 PGOHUM00000234155 PGOHUM00000233190
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Genomic Variantsfor CHCHD10 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 22 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CHCHD10 (24108021 - 24110630 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CHCHD10: --
SABiosciences Cancer Mutation PCR Assays
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Disorders
/ Diseasesfor CHCHD10 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CHCHD10 for disorders About GeneDecksing 1 disease for CHCHD10 : About MalaCards twinning Human Genome Epidemiology (HuGE) Navigator: CHCHD10 (4 documents) Export disorders for CHCHD10 gene to outside databases
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Publicationsfor CHCHD10 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CHCHD10 gene integrated from 9 sources : (articles sorted by number of sources associating them with CHCHD10) Utopia : connect your pdf to the dynamic world of online information
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Functional annotation of heart enriched mitochondrial genes GBAS and CHCHD10 through guilt by association. (PubMed id 20888800) 1 Martherus R.S....Ayoubi T.A. (2010) Genetic variants in nuclear-encoded mitochondrial gen es influence AIDS progression. (PubMed id 20877624) 1 Hendrickson S.L....O'Brien S.J. (2010) Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086) 1 Bailey S.D....Anand S. (2010) Gene-centric association signals for lipids and apoli poproteins identified via the HumanCVD BeadChip. (PubMed id 19913121) 1 Talmud P.J.... . (2009) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 2 Ota T.... Sugano S. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id ) 2 Aoki H.... Hino O. (2000)
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External Searches for CHCHD10 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CHCHD10 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing CHCHD10 gene
(According to HUGE )
About This Section --
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Specialized Databases showing CHCHD10 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for CHCHD10 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for CHCHD10 gene: Search GeneIP for patents involving CHCHD10 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CHCHD10 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for CHCHD10 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CHCHD10 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CHCHD10 OriGene Protein Over-expression Lysate for CHCHD10 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CHCHD10 OriGene 3'-UTR Clone for CHCHD10 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CHCHD10 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CHCHD10 OriGene Custom Protein Services for CHCHD10 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CHCHD10 Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CHCHD10 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CHCHD10 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CHCHD10 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CHCHD10 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CHCHD10
Search Tocris compounds for CHCHD10
CHCHD10 Proteins, Antibodies, CLIAs, and ELISAs
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CHCHD10
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