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Aliases for CH17-125A10.2 Gene

Subcategory (RNA class) for CH17-125A10.2 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for CH17-125A10.2 Gene

  • Uncharacterized CH17-125A10.2 3

External Ids for CH17-125A10.2 Gene

Summaries for CH17-125A10.2 Gene

GeneCards Summary for CH17-125A10.2 Gene

CH17-125A10.2 (Uncharacterized CH17-125A10.2) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for CH17-125A10.2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CH17-125A10.2 Gene

Genomics for CH17-125A10.2 Gene

Regulatory Elements for CH17-125A10.2 Gene

Enhancers for CH17-125A10.2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H144323 0.2 Ensembl 0.7 -0.4 -393 0.2 CH17-125A10.2 LOC101060524
GH01H144371 0.2 Ensembl 0.2 +47.6 47609 1 PPIAL4E CH17-125A10.2
GH01H144372 0.2 Ensembl 0.2 +48.4 48408 0.2 PPIAL4E CH17-125A10.2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CH17-125A10.2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CH17-125A10.2 Gene

Genomic Locations for CH17-125A10.2 Gene
chr1:144,324,093-144,340,912
(GRCh38/hg38)
Size:
16,820 bases
Orientation:
Plus strand

Genomic View for CH17-125A10.2 Gene

Genes around CH17-125A10.2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CH17-125A10.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CH17-125A10.2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CH17-125A10.2 Gene

Proteins for CH17-125A10.2 Gene

Post-translational modifications for CH17-125A10.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CH17-125A10.2 Gene

Domains & Families for CH17-125A10.2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CH17-125A10.2 Gene

Function for CH17-125A10.2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CH17-125A10.2 Gene

Localization for CH17-125A10.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CH17-125A10.2 Gene

Pathways & Interactions for CH17-125A10.2 Gene

SuperPathways for CH17-125A10.2 Gene

No Data Available

Interacting Proteins for CH17-125A10.2 Gene

Gene Ontology (GO) - Biological Process for CH17-125A10.2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CH17-125A10.2 Gene

Drugs & Compounds for CH17-125A10.2 Gene

No Compound Related Data Available

Transcripts for CH17-125A10.2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CH17-125A10.2 Gene

No ASD Table

Relevant External Links for CH17-125A10.2 Gene

GeneLoc Exon Structure for
CH17-125A10.2

No data available for mRNA/cDNA for CH17-125A10.2 Gene

Expression for CH17-125A10.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CH17-125A10.2 Gene

Orthologs for CH17-125A10.2 Gene

No data available for Orthologs and Evolution for CH17-125A10.2 Gene

Paralogs for CH17-125A10.2 Gene

No data available for Paralogs for CH17-125A10.2 Gene

Variants for CH17-125A10.2 Gene

Sequence variations from dbSNP and Humsavar for CH17-125A10.2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs111235314 -- 144,336,658(-) TTTAG(G/T)GAGTG intron-variant
rs111610518 -- 144,337,256(-) CAATC(A/G)TTAAT intron-variant
rs112160525 -- 144,339,237(-) TTAGA(C/G)TCTCA intron-variant
rs112359065 -- 144,336,027(-) GAAAG(A/G)TATGA intron-variant
rs112488510 -- 144,339,739(-) TTCTG(C/T)TTCCT intron-variant, nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for CH17-125A10.2 Gene

Disorders for CH17-125A10.2 Gene

No disorders were found for CH17-125A10.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CH17-125A10.2 Gene

Publications for CH17-125A10.2 Gene

No publications were found for CH17-125A10.2 Gene.

Products for CH17-125A10.2 Gene

Sources for CH17-125A10.2 Gene

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