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Aliases for CFL1P1 Gene

Aliases for CFL1P1 Gene

  • Cofilin 1 Pseudogene 1 2 3 5
  • Cofilin Pseudogene 1 2 3
  • Cofilin 1 (Non-Muscle) Pseudogene 1 3
  • CFLP1 3

External Ids for CFL1P1 Gene

Previous HGNC Symbols for CFL1P1 Gene

  • CFLP1

Previous GeneCards Identifiers for CFL1P1 Gene

  • GC10P089578

Summaries for CFL1P1 Gene

GeneCards Summary for CFL1P1 Gene

CFL1P1 (Cofilin 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFL1P1 Gene

Genomics for CFL1P1 Gene

Regulatory Elements for CFL1P1 Gene

Enhancers for CFL1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G087091 1.4 ENCODE dbSUPER 21.6 -724.0 -724033 6.2 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC NUTM2A-AS1 ENSG00000272631 FAM35A BMPR1A CFL1P1 RPL11P3 ENSG00000227896 FAM25A BMS1P3 ADIRF-AS1
GH10G087585 1 ENCODE 29.8 -231.5 -231548 2.6 PKNOX1 ZFP64 FEZF1 YY1 FOS ZNF662 GLIS1 ZNF624 ZNF300 WT1 CFL1P1 LINC00863 FAM35A ENSG00000272631 NUTM2A BMS1P3 FAM25A ADIRF-AS1 NUTM2A-AS1 ENSG00000261011
GH10G087588 0.9 ENCODE 16.9 -227.6 -227555 2.9 FOXA2 RARA YY1 FOS ETV6 RELB CREM IKZF2 THAP11 CBFB CFL1P1 PAPSS2 ENSG00000225913 LOC105378412 GC10P087578
GH10G087142 1.1 Ensembl ENCODE 11.8 -675.2 -675242 1.0 HDGF FOXA2 PKNOX1 BMI1 ZBTB40 ETV6 FOS RELB CREM IKZF2 CFL1P1 NUTM2D NUTM2A FAM35A NUTM2A-AS1 RN7SL733P ENSG00000237280
GH10G087213 0.9 Ensembl ENCODE 11.8 -603.7 -603662 1.3 CTCF NR2F1 CEBPB CEBPG ZNF384 RAD21 YY1 JUND ZNF157 CEBPA CFL1P1 NUTM2A-AS1 PIR40860 NUTM2A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CFL1P1 on UCSC Golden Path with GeneCards custom track

Promoters for CFL1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000031114 72 2401 HDGF PKNOX1 ARID4B SIN3A YY1 SLC30A9 ZNF143 ZNF207 KLF13 DEK

Genomic Location for CFL1P1 Gene

Chromosome:
10
Start:
87,817,928 bp from pter
End:
87,845,612 bp from pter
Size:
27,685 bases
Orientation:
Plus strand

Genomic View for CFL1P1 Gene

Genes around CFL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CFL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CFL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFL1P1 Gene

Proteins for CFL1P1 Gene

Post-translational modifications for CFL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CFL1P1 Gene

Domains & Families for CFL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CFL1P1 Gene

Function for CFL1P1 Gene

Phenotypes for CFL1P1 Gene

GenomeRNAi human phenotypes for CFL1P1:
genes like me logo Genes that share phenotypes with CFL1P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CFL1P1 Gene

Localization for CFL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CFL1P1 Gene

Pathways & Interactions for CFL1P1 Gene

SuperPathways for CFL1P1 Gene

No Data Available

Interacting Proteins for CFL1P1 Gene

Gene Ontology (GO) - Biological Process for CFL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CFL1P1 Gene

Drugs & Compounds for CFL1P1 Gene

No Compound Related Data Available

Transcripts for CFL1P1 Gene

mRNA/cDNA for CFL1P1 Gene

(2) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CFL1P1 Gene

Cofilin 1 (non-muscle) pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CFL1P1 Gene

No ASD Table

Relevant External Links for CFL1P1 Gene

GeneLoc Exon Structure for
CFL1P1
ECgene alternative splicing isoforms for
CFL1P1

Expression for CFL1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CFL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CFL1P1 Gene:

CFL1P1

SOURCE GeneReport for Unigene cluster for CFL1P1 Gene:

Hs.369431
genes like me logo Genes that share expression patterns with CFL1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CFL1P1 Gene

Orthologs for CFL1P1 Gene

Evolution for CFL1P1 Gene

ENSEMBL:
Gene Tree for CFL1P1 (if available)
TreeFam:
Gene Tree for CFL1P1 (if available)

No data available for Orthologs for CFL1P1 Gene

Paralogs for CFL1P1 Gene

No data available for Paralogs for CFL1P1 Gene

Variants for CFL1P1 Gene

Sequence variations from dbSNP and Humsavar for CFL1P1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000056315 -- 87,832,529(+) TTATA(C/G)TACAA intron-variant
rs1000091820 -- 87,840,086(+) TAAAA(G/T)GTTAC intron-variant
rs1000314013 -- 87,832,286(+) CTACT(C/G/T)GGGAA intron-variant
rs1000386939 -- 87,818,905(+) AGAAC(A/G)AGCGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000422465 -- 87,825,599(+) CCACC(A/G)TGCCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CFL1P1 Gene

Variant ID Type Subtype PubMed ID
nsv1041462 CNV gain 25217958
nsv24540 CNV insertion 16902084
nsv518233 CNV loss 19592680

Relevant External Links for CFL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CFL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CFL1P1 Gene

Disorders for CFL1P1 Gene

Relevant External Links for CFL1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CFL1P1

No disorders were found for CFL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CFL1P1 Gene

Publications for CFL1P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64

Products for CFL1P1 Gene

Sources for CFL1P1 Gene

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