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Aliases for CFAP97 Gene

Aliases for CFAP97 Gene

  • Cilia And Flagella Associated Protein 97 2 3
  • KIAA1430 2 3 4
  • Cilia- And Flagella-Associated Protein 97 3
  • Hmw 3

External Ids for CFAP97 Gene

Previous Symbols for CFAP97 Gene

  • KIAA1430

Summaries for CFAP97 Gene

GeneCards Summary for CFAP97 Gene

CFAP97 (Cilia And Flagella Associated Protein 97) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP97 Gene

Genomics for CFAP97 Gene

Genomic Location for CFAP97 Gene

Start:
185,159,661 bp from pter
End:
185,209,504 bp from pter
Size:
49,844 bases
Orientation:
Minus strand

Genomic View for CFAP97 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CFAP97 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP97 Gene

No data available for Regulatory Elements for CFAP97 Gene

Proteins for CFAP97 Gene

  • Protein details for CFAP97 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9P2B7-CFA97_HUMAN
    Recommended name:
    Cilia- and flagella-associated protein 97
    Protein Accession:
    Q9P2B7
    Secondary Accessions:
    • B3KRP7
    • D3DP60
    • Q05CU1
    • Q4W5M4
    • Q8N6E7
    • Q9UF45

    Protein attributes for CFAP97 Gene

    Size:
    532 amino acids
    Molecular mass:
    59475 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH20772.1; Type=Frameshift; Positions=50; Evidence={ECO:0000305}; Sequence=AAH20772.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=AAY40976.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for CFAP97 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CFAP97 Gene

Proteomics data for CFAP97 Gene at MOPED

Post-translational modifications for CFAP97 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CFAP97 Gene

No data available for DME Specific Peptides for CFAP97 Gene

Domains for CFAP97 Gene

Protein Domains for CFAP97 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

CFA97_HUMAN
Family:
  • Belongs to the CFAP97 family.:
    • Q9P2B7
genes like me logo Genes that share domains with CFAP97: view

No data available for Gene Families for CFAP97 Gene

Function for CFAP97 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CFAP97 Gene

Localization for CFAP97 Gene

No data available for Gene Ontology (GO) - Cellular Components for CFAP97 Gene

Pathways for CFAP97 Gene

SuperPathways for CFAP97 Gene

No Data Available

Interacting Proteins for CFAP97 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000409964%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000409964 for CFAP97 Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for CFAP97 Gene

None

No data available for Pathways by source for CFAP97 Gene

Transcripts for CFAP97 Gene

mRNA/cDNA for CFAP97 Gene

(6) REFSEQ mRNAs :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP97 Gene

No ASD Table

Relevant External Links for CFAP97 Gene

GeneLoc Exon Structure for
CFAP97
ECgene alternative splicing isoforms for
CFAP97

Expression for CFAP97 Gene

mRNA expression in normal human tissues for CFAP97 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for CFAP97 Gene

genes like me logo Genes that share expressions with CFAP97: view

Orthologs for CFAP97 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CFAP97 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA1430 36
  • 96.59 (n)
  • 95.64 (a)
KIAA1430 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia KIAA1430 36
  • 79.17 (n)
  • 73.52 (a)
KIAA1430 37
  • 74 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KIAA1430 36
  • 84.97 (n)
  • 79.19 (a)
KIAA1430 37
  • 79 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4933411K20Rik 36
  • 78.45 (n)
  • 73.4 (a)
4933411K20Rik 16
4933411K20Rik 37
  • 70 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KIAA1430 37
  • 59 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA1430 37
  • 33 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1307325 36
  • 77.13 (n)
  • 73.49 (a)
chicken
(Gallus gallus)
Aves KIAA1430 37
  • 38 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA1430 37
  • 49 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia kiaa1430 36
  • 57.08 (n)
  • 47.49 (a)
zebrafish
(Danio rerio)
Actinopterygii zgc:85910 37
  • 33 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 28 (a)
OneToOne
Species with no ortholog for CFAP97:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CFAP97 Gene

ENSEMBL:
Gene Tree for CFAP97 (if available)
TreeFam:
Gene Tree for CFAP97 (if available)

Paralogs for CFAP97 Gene

Pseudogenes.org Pseudogenes for CFAP97 Gene

genes like me logo Genes that share paralogs with CFAP97: view

No data available for Paralogs for CFAP97 Gene

Variants for CFAP97 Gene

Sequence variations from dbSNP and Humsavar for CFAP97 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs1133657 -- 185,190,485(-) GTACT(A/G)CACCA reference, missense
rs1534140 -- 185,196,008(+) GAATA(C/T)CTTTG intron-variant
rs1534141 -- 185,197,931(+) ctact(C/T)cagcg intron-variant
rs1969456 -- 185,196,343(+) GTGGC(A/G)CGTGC intron-variant
rs2030800 -- 185,203,701(+) GGTGG(A/G)ACGGC intron-variant

Relevant External Links for CFAP97 Gene

HapMap Linkage Disequilibrium report
CFAP97

No data available for Structural Variations from Database of Genomic Variants (DGV) for CFAP97 Gene

Disorders for CFAP97 Gene

No disorders were found for CFAP97 Gene.

No data available for UniProtKB/Swiss-Prot for CFAP97 Gene

Publications for CFAP97 Gene

  1. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10718198) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. hemingway is required for sperm flagella assembly and ciliary motility in Drosophila. (PMID: 24554765) Soulavie F. … Durand B. (Mol. Biol. Cell 2014) 2 3
  4. Proteomic analysis reveals a FANCA-modulated neddylation pathway involved in CXCR5 membrane targeting and cell mobility. (PMID: 25015289) Renaudin X. … Rosselli F. (J. Cell. Sci. 2014) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for CFAP97 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate CFAP97
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CFAP97
    • Block miRNA regulation of CFAP97 using miScript Target Protectors

    Sources for CFAP97 Gene

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