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Aliases for CFAP74 Gene

Aliases for CFAP74 Gene

  • Cilia And Flagella Associated Protein 74 2 3 5
  • KIAA1751 2 3 4
  • C1orf222 3 4
  • Cilia- And Flagella-Associated Protein 74 3
  • Chromosome 1 Open Reading Frame 222 2

External Ids for CFAP74 Gene

Previous HGNC Symbols for CFAP74 Gene

  • C1orf222
  • KIAA1751

Summaries for CFAP74 Gene

GeneCards Summary for CFAP74 Gene

CFAP74 (Cilia And Flagella Associated Protein 74) is a Protein Coding gene.

UniProtKB/Swiss-Prot for CFAP74 Gene

  • As part of the central apparatus of the cilium axoneme may play a role in cilium movement.

Additional gene information for CFAP74 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP74 Gene

Genomics for CFAP74 Gene

Regulatory Elements for CFAP74 Gene

Enhancers for CFAP74 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H001906 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +95.7 95650 4.3 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 LOC105378949 INTS11 ENSG00000240731 CALML6 CCNL2 CDK11A LOC100288379 C1orf159 TMEM52 NOC2L
GH01H001913 1.3 ENCODE dbSUPER 11.5 +86.3 86264 7.7 HDGF PKNOX1 ATF1 MLX ZFP64 ARID4B SIN3A DMAP1 BRCA1 GLIS2 LOC105378949 TMEM52 CALML6 CFAP74 LOC105378589 GABRD
GH01H001922 0.8 ENCODE 11.5 +80.8 80802 2 MLX ARID4B DMAP1 RARA THAP11 EGR2 SP5 MXD4 KAT8 MIER3 LOC105378949 TMEM52 CFAP74 LOC105378589 GABRD GC01P001930
GH01H002069 0.7 ENCODE 11.8 -68.0 -67961 4.3 MXI1 ATF1 BCL11B RARA TEAD3 ZFHX2 POLR2A RCOR1 ATF7 CREM GABRD LOC105378589 CFAP74 PRKCZ SCNN1D GC01M002070 GC01P002058
GH01H001968 0.4 ENCODE 10.1 +34.8 34781 0.2 KLF1 CFAP74 PIR40513
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CFAP74 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CFAP74 Gene

Genomic Locations for CFAP74 Gene
81,887 bases
Minus strand

Genomic View for CFAP74 Gene

Genes around CFAP74 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CFAP74 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CFAP74 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP74 Gene

Proteins for CFAP74 Gene

  • Protein details for CFAP74 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Cilia- and flagella-associated protein 74
    Protein Accession:
    Secondary Accessions:
    • A4VCI2
    • H7C4E1
    • Q5T2D9
    • Q5T2E0
    • Q69YW0
    • Q6ZSJ4

    Protein attributes for CFAP74 Gene

    1584 amino acids
    Molecular mass:
    178589 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAI14927.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305}; Sequence=BAB21842.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305}; Sequence=CAH10703.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305};

    Alternative splice isoforms for CFAP74 Gene


neXtProt entry for CFAP74 Gene

Post-translational modifications for CFAP74 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for CFAP74 Gene

Domains & Families for CFAP74 Gene

Gene Families for CFAP74 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CFAP74 Gene


Suggested Antigen Peptide Sequences for CFAP74 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the CFAP74 family.
  • Belongs to the CFAP74 family.
genes like me logo Genes that share domains with CFAP74: view

Function for CFAP74 Gene

Molecular function for CFAP74 Gene

UniProtKB/Swiss-Prot Function:
As part of the central apparatus of the cilium axoneme may play a role in cilium movement.

Phenotypes From GWAS Catalog for CFAP74 Gene

genes like me logo Genes that share phenotypes with CFAP74: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CFAP74 Gene

Localization for CFAP74 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CFAP74 Gene

Cytoplasm, cytoskeleton, cilium axoneme.

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CFAP74 gene
Compartment Confidence
cytoskeleton 4
nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1
golgi apparatus 1

Gene Ontology (GO) - Cellular Components for CFAP74 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005856 cytoskeleton IEA --
GO:0005929 cilium IEA --
GO:0005930 axoneme ISS --
GO:0042995 cell projection IEA --
genes like me logo Genes that share ontologies with CFAP74: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for CFAP74 Gene

Pathways & Interactions for CFAP74 Gene

SuperPathways for CFAP74 Gene

No Data Available

Interacting Proteins for CFAP74 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
Selected Interacting proteins: ENSP00000417061 Q9C0B2-CFA74_HUMAN for CFAP74 Gene via STRING IID

Gene Ontology (GO) - Biological Process for CFAP74 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035082 axoneme assembly ISS --
genes like me logo Genes that share ontologies with CFAP74: view

No data available for Pathways by source and SIGNOR curated interactions for CFAP74 Gene

Drugs & Compounds for CFAP74 Gene

No Compound Related Data Available

Transcripts for CFAP74 Gene

mRNA/cDNA for CFAP74 Gene

(10) REFSEQ mRNAs :
(5) Selected AceView cDNA sequences:
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP74 Gene

No ASD Table

Relevant External Links for CFAP74 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CFAP74 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CFAP74 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for CFAP74 Gene

This gene is overexpressed in Amniocyte (42.4) and Bone marrow mesenchymal stem cell (25.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for CFAP74 Gene

NURSA nuclear receptor signaling pathways regulating expression of CFAP74 Gene:


Evidence on tissue expression from TISSUES for CFAP74 Gene

  • Nervous system(4)
genes like me logo Genes that share expression patterns with CFAP74: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for CFAP74 Gene

Orthologs for CFAP74 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CFAP74 Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia KIAA1751 33
  • 76.36 (n)
C1orf222 34
  • 73 (a)
(Rattus norvegicus)
Mammalia LOC100362748 33
  • 73.9 (n)
(Mus musculus)
Mammalia 2010015L04Rik 33
  • 73.62 (n)
Cfap74 16
(Bos Taurus)
Mammalia C1orf222 34
  • 72 (a)
(Ornithorhynchus anatinus)
Mammalia C1orf222 34
  • 49 (a)
(Gallus gallus)
Aves KIAA1751 33
  • 54.4 (n)
C1orf222 34
  • 38 (a)
(Anolis carolinensis)
Reptilia C1orf222 34
  • 40 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia c1orf222 33
  • 53.69 (n)
(Danio rerio)
Actinopterygii si:dkeyp-87a12.1 33
  • 48.02 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 29 (a)
-- 34
  • 11 (a)
Species where no ortholog for CFAP74 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CFAP74 Gene

Gene Tree for CFAP74 (if available)
Gene Tree for CFAP74 (if available)

Paralogs for CFAP74 Gene

No data available for Paralogs for CFAP74 Gene

Variants for CFAP74 Gene

Sequence variations from dbSNP and Humsavar for CFAP74 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000003267 -- 1,981,331(+) GGGGC(A/G)CTGCC intron-variant
rs1000034351 -- 1,960,405(+) ATATG(A/G)GACCA intron-variant
rs1000099552 -- 1,961,352(+) GCTGC(A/G)GGACA intron-variant
rs1000120274 -- 1,934,628(+) AGGTA(C/T)ACACG intron-variant
rs1000123498 -- 1,995,015(+) TGAAA(A/G)GTTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CFAP74 Gene

Variant ID Type Subtype PubMed ID
nsv958160 CNV deletion 24416366
nsv834446 CNV loss 17160897
nsv834335 CNV loss 17160897
nsv545044 CNV gain 21841781
nsv482937 CNV loss 15286789
nsv1113060 CNV deletion 24896259
nsv1074477 CNV deletion 25765185
esv994854 CNV loss 20482838
esv3585019 CNV loss 21293372
esv3559676 CNV deletion 23714750
esv3385175 CNV duplication 20981092
esv2758913 CNV gain+loss 17122850
esv2668919 CNV deletion 23128226
esv25575 CNV gain+loss 19812545
esv2381744 CNV deletion 18987734
esv1718201 CNV insertion 17803354
esv1576320 CNV insertion 17803354
dgv43n54 CNV loss 21841781

Variation tolerance for CFAP74 Gene

Gene Damage Index Score: 19.45; 98.86% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CFAP74 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CFAP74 Gene

Disorders for CFAP74 Gene

Relevant External Links for CFAP74

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for CFAP74 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CFAP74 Gene

Publications for CFAP74 Gene

  1. The full-ORF clone resource of the German cDNA Consortium. (PMID: 17974005) Bechtel S … Schupp I (BMC genomics 2007) 3 4 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  4. Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 11214970) Nagase T … Ohara O (DNA research : an international journal for rapid publication of reports on genes and genomes 2000) 3 4 60
  5. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60

Products for CFAP74 Gene

Sources for CFAP74 Gene

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