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Aliases for CFAP69 Gene

Aliases for CFAP69 Gene

  • Cilia And Flagella Associated Protein 69 2 3
  • C7orf63 3 4
  • Flagellar Protein 69 Homolog (Chlamydomonas) 2
  • Cilia- And Flagella-Associated Protein 69 3
  • Chromosome 7 Open Reading Frame 63 2
  • Hypothetical Protein FLJ21062 2
  • FAP69 3

External Ids for CFAP69 Gene

Previous HGNC Symbols for CFAP69 Gene

  • C7orf63

Summaries for CFAP69 Gene

GeneCards Summary for CFAP69 Gene

CFAP69 (Cilia And Flagella Associated Protein 69) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP69 Gene

Genomics for CFAP69 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CFAP69 Gene

Start:
90,245,174 bp from pter
End:
90,311,063 bp from pter
Size:
65,890 bases
Orientation:
Plus strand

Genomic View for CFAP69 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CFAP69 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP69 Gene

No data available for Regulatory Elements for CFAP69 Gene

Proteins for CFAP69 Gene

  • Protein details for CFAP69 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A5D8W1-CFA69_HUMAN
    Recommended name:
    Cilia- and flagella-associated protein 69
    Protein Accession:
    A5D8W1
    Secondary Accessions:
    • A3KMP9
    • B4DYW6
    • B4DZP7
    • B9EIM7
    • Q6V705
    • Q8IY89
    • Q9H7C2

    Protein attributes for CFAP69 Gene

    Size:
    941 amino acids
    Molecular mass:
    105883 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14972.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for CFAP69 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CFAP69 Gene

Proteomics data for CFAP69 Gene at MOPED

Post-translational modifications for CFAP69 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for CFAP69 Gene

Domains for CFAP69 Gene

Protein Domains for CFAP69 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CFAP69: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CFAP69 Gene

Function for CFAP69 Gene

Gene Ontology (GO) - Molecular Function for CFAP69 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
genes like me logo Genes that share ontologies with CFAP69: view

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CFAP69

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CFAP69 Gene

Localization for CFAP69 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CFAP69 Gene

Pathways for CFAP69 Gene

SuperPathways for CFAP69 Gene

No Data Available

Interacting Proteins for CFAP69 Gene

Gene Ontology (GO) - Biological Process for CFAP69 Gene

None

No data available for Pathways by source for CFAP69 Gene

Transcripts for CFAP69 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CFAP69

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for CFAP69
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP69 Gene

No ASD Table

Relevant External Links for CFAP69 Gene

GeneLoc Exon Structure for
CFAP69
ECgene alternative splicing isoforms for
CFAP69

Expression for CFAP69 Gene

mRNA expression in normal human tissues for CFAP69 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for CFAP69 Gene

genes like me logo Genes that share expressions with CFAP69: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for CFAP69 Gene

Orthologs for CFAP69 Gene

This gene was present in the common ancestor of chordates.

Orthologs for CFAP69 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C7H7orf63 35
  • 99.36 (n)
  • 98.94 (a)
C7orf63 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C4H7orf63 35
  • 90.55 (n)
  • 87.55 (a)
C7orf63 36
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C14H7orf63 35
  • 90.06 (n)
  • 88.77 (a)
C7orf63 36
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia A330021E22Rik 35
  • 84.7 (n)
  • 83.95 (a)
A330021E22Rik 16
A330021E22Rik 36
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C7orf63 36
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C7orf63 36
  • 72 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100910867 35
  • 85.34 (n)
  • 83.81 (a)
chicken
(Gallus gallus)
Aves C2H7ORF63 35
  • 67.94 (n)
  • 58.82 (a)
C7orf63 36
  • 57 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C7orf63 36
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100494509 35
  • 64.72 (n)
  • 59.53 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 30 (a)
OneToMany
-- 36
  • 52 (a)
OneToMany
-- 36
  • 38 (a)
OneToMany
Species with no ortholog for CFAP69:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CFAP69 Gene

ENSEMBL:
Gene Tree for CFAP69 (if available)
TreeFam:
Gene Tree for CFAP69 (if available)

Paralogs for CFAP69 Gene

Pseudogenes.org Pseudogenes for CFAP69 Gene

genes like me logo Genes that share paralogs with CFAP69: view

No data available for Paralogs for CFAP69 Gene

Variants for CFAP69 Gene

Sequence variations from dbSNP and Humsavar for CFAP69 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs194536 -- 90,244,410(+) tgggg(G/T)acaca upstream-variant-2KB
rs194537 -- 90,245,730(+) CGGTT(A/G)CGAGG intron-variant
rs916645 -- 90,251,666(+) TTCCT(A/G)AAACA intron-variant
rs916646 -- 90,251,919(+) CTGCA(A/T)TTGGG intron-variant
rs916647 -- 90,251,925(+) TTGGG(C/G)TGGCC intron-variant

Relevant External Links for CFAP69 Gene

HapMap Linkage Disequilibrium report
CFAP69

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CFAP69 Gene

Disorders for CFAP69 Gene

No disorders were found for CFAP69 Gene.

No data available for UniProtKB/Swiss-Prot for CFAP69 Gene

Publications for CFAP69 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. DNA methylation profiles in diffuse large B-cell lymphoma and their relationship to gene expression status. (PMID: 18288132) Pike B.L. … Hacia J.G. (Leukemia 2008) 3
  4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3
  5. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 4

Products for CFAP69 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate CFAP69
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CFAP69
    • Block miRNA regulation of CFAP69 using miScript Target Protectors

    Sources for CFAP69 Gene

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