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Aliases for CFAP58-AS1 Gene

Subcategory (RNA class) for CFAP58-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CFAP58-AS1 Gene

  • CFAP58 Antisense RNA 1 (Head To Head) 2 3
  • CCDC147 Antisense RNA 1 (Head To Head) 2 3
  • CCDC147 Antisense RNA 1 2
  • CCDC147-AS1 3

External Ids for CFAP58-AS1 Gene

Previous Symbols for CFAP58-AS1 Gene

  • CCDC147-AS1

Summaries for CFAP58-AS1 Gene

GeneCards Summary for CFAP58-AS1 Gene

CFAP58-AS1 (CFAP58 Antisense RNA 1 (Head To Head)) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP58-AS1 Gene

Genomics for CFAP58-AS1 Gene

Genomic Location for CFAP58-AS1 Gene

Start:
104,351,301 bp from pter
End:
104,353,575 bp from pter
Size:
2,275 bases
Orientation:
Minus strand

Genomic View for CFAP58-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CFAP58-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP58-AS1 Gene

No data available for Regulatory Elements for CFAP58-AS1 Gene

Proteins for CFAP58-AS1 Gene

Post-translational modifications for CFAP58-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CFAP58-AS1 Gene

Domains for CFAP58-AS1 Gene

Gene Families for CFAP58-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with CFAP58-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for CFAP58-AS1 Gene

Function for CFAP58-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CFAP58-AS1 Gene

Localization for CFAP58-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for CFAP58-AS1 Gene

Pathways for CFAP58-AS1 Gene

SuperPathways for CFAP58-AS1 Gene

No Data Available

Interacting Proteins for CFAP58-AS1 Gene

Gene Ontology (GO) - Biological Process for CFAP58-AS1 Gene

None

No data available for Pathways by source for CFAP58-AS1 Gene

Transcripts for CFAP58-AS1 Gene

mRNA/cDNA for CFAP58-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP58-AS1 Gene

No ASD Table

Relevant External Links for CFAP58-AS1 Gene

GeneLoc Exon Structure for
CFAP58-AS1
ECgene alternative splicing isoforms for
CFAP58-AS1

Expression for CFAP58-AS1 Gene

mRNA expression in normal human tissues for CFAP58-AS1 Gene

genes like me logo Genes that share expressions with CFAP58-AS1: view

Orthologs for CFAP58-AS1 Gene

Evolution for CFAP58-AS1 Gene

ENSEMBL:
Gene Tree for CFAP58-AS1 (if available)
TreeFam:
Gene Tree for CFAP58-AS1 (if available)

No data available for Orthologs for CFAP58-AS1 Gene

Paralogs for CFAP58-AS1 Gene

No data available for Paralogs for CFAP58-AS1 Gene

Variants for CFAP58-AS1 Gene

Sequence variations from dbSNP and Humsavar for CFAP58-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs11192019 -- 104,351,331(+) ATCAA(C/T)CCAAC nc-transcript-variant
rs11192020 -- 104,351,371(+) CTAAA(A/C)ATTAT nc-transcript-variant
rs12241488 -- 104,351,716(+) tgaag(A/C)taatg nc-transcript-variant
rs12250794 -- 104,351,338(+) CAACA(C/T)AGTTC nc-transcript-variant
rs12359649 -- 104,351,421(+) AACAC(A/G)GAAGA nc-transcript-variant

Relevant External Links for CFAP58-AS1 Gene

HapMap Linkage Disequilibrium report
CFAP58-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for CFAP58-AS1 Gene

Disorders for CFAP58-AS1 Gene

No disorders were found for CFAP58-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for CFAP58-AS1 Gene

Publications for CFAP58-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for CFAP58-AS1 Gene

Sources for CFAP58-AS1 Gene

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