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Aliases for CFAP44-AS1 Gene

Subcategory (RNA class) for CFAP44-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CFAP44-AS1 Gene

  • CFAP44 Antisense RNA 1 2 3 5
  • WDR52 Antisense RNA 1 (Non-Protein Coding) 2 3
  • WDR52 Antisense RNA 1 2
  • WDR52-AS1 3

External Ids for CFAP44-AS1 Gene

Previous HGNC Symbols for CFAP44-AS1 Gene

  • WDR52-AS1

Summaries for CFAP44-AS1 Gene

GeneCards Summary for CFAP44-AS1 Gene

CFAP44-AS1 (CFAP44 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CFAP44-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CFAP44-AS1 Gene

Genomics for CFAP44-AS1 Gene

GeneHancer (GH) Regulatory Elements for CFAP44-AS1 Gene

Promoters and enhancers for CFAP44-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I114306 Enhancer 0.9 ENCODE dbSUPER 4.2 +904.3 904257 2.8 EBF1 BATF IRF4 RELA ZSCAN29 ETV6 BCLAF1 IKZF2 RUNX3 SRF CFAP44-AS1 MIR568 TIGIT
GH03I114312 Enhancer 0.4 dbSUPER 4.2 +912.1 912061 6.7 ZSCAN4 JUNB RUNX3 MIR568 ZBTB20-AS1 CFAP44-AS1 ENSG00000259976 TIGIT ZBTB20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CFAP44-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CFAP44-AS1 Gene

Genomic Locations for CFAP44-AS1 Gene
chr3:113,403,991-113,433,992
(GRCh38/hg38)
Size:
30,002 bases
Orientation:
Plus strand
chr3:113,122,838-113,152,839
(GRCh37/hg19)

Genomic View for CFAP44-AS1 Gene

Genes around CFAP44-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CFAP44-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CFAP44-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CFAP44-AS1 Gene

Proteins for CFAP44-AS1 Gene

Post-translational modifications for CFAP44-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CFAP44-AS1 Gene

Domains & Families for CFAP44-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CFAP44-AS1 Gene

Function for CFAP44-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CFAP44-AS1 Gene

Localization for CFAP44-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CFAP44-AS1 Gene

Pathways & Interactions for CFAP44-AS1 Gene

SuperPathways for CFAP44-AS1 Gene

No Data Available

Interacting Proteins for CFAP44-AS1 Gene

Gene Ontology (GO) - Biological Process for CFAP44-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CFAP44-AS1 Gene

Drugs & Compounds for CFAP44-AS1 Gene

No Compound Related Data Available

Transcripts for CFAP44-AS1 Gene

mRNA/cDNA for CFAP44-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CFAP44-AS1 Gene

No ASD Table

Relevant External Links for CFAP44-AS1 Gene

GeneLoc Exon Structure for
CFAP44-AS1
ECgene alternative splicing isoforms for
CFAP44-AS1

Expression for CFAP44-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CFAP44-AS1 Gene

genes like me logo Genes that share expression patterns with CFAP44-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CFAP44-AS1 Gene

Orthologs for CFAP44-AS1 Gene

Evolution for CFAP44-AS1 Gene

ENSEMBL:
Gene Tree for CFAP44-AS1 (if available)
TreeFam:
Gene Tree for CFAP44-AS1 (if available)

No data available for Orthologs for CFAP44-AS1 Gene

Paralogs for CFAP44-AS1 Gene

No data available for Paralogs for CFAP44-AS1 Gene

Variants for CFAP44-AS1 Gene

Sequence variations from dbSNP and Humsavar for CFAP44-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000161855 -- 113,423,843(+) G/A intron_variant
rs1000278358 -- 113,405,726(+) C/T intron_variant
rs1000336870 -- 113,406,537(+) T/C intron_variant
rs1000441282 -- 113,411,817(+) T/C intron_variant
rs1000598686 -- 113,431,470(+) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CFAP44-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1013506 CNV gain 25217958
nsv822221 CNV loss 20364138

Additional Variant Information for CFAP44-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CFAP44-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CFAP44-AS1 Gene

Disorders for CFAP44-AS1 Gene

Additional Disease Information for CFAP44-AS1

No disorders were found for CFAP44-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CFAP44-AS1 Gene

Publications for CFAP44-AS1 Gene

No publications were found for CFAP44-AS1 Gene.

Products for CFAP44-AS1 Gene

Sources for CFAP44-AS1 Gene

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