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Aliases for CERS6-AS1 Gene

Subcategory (RNA class) for CERS6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CERS6-AS1 Gene

  • CERS6 Antisense RNA 1 2 3 5

External Ids for CERS6-AS1 Gene

Previous GeneCards Identifiers for CERS6-AS1 Gene

  • GC02M169630

Summaries for CERS6-AS1 Gene

GeneCards Summary for CERS6-AS1 Gene

CERS6-AS1 (CERS6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CERS6-AS1 Gene

Genomics for CERS6-AS1 Gene

Regulatory Elements for CERS6-AS1 Gene

Enhancers for CERS6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F168764 0.7 ENCODE 11.5 +21.0 21028 2.0 JUND SMARCA4 POLR2A HLF FOS HOMEZ G6PC2 CERS6-AS1 NOSTRIN GC02M168607 RNU6-766P
GH02F168820 0.4 FANTOM5 10.5 -33.8 -33761 0.0 CERS6-AS1 NOSTRIN GC02M168846
GH02F168780 1.1 Ensembl 5.6 +6.0 5961 0.4 SOX13 CHD4 CEBPG RAD21 YY1 TRIM24 MAFK SOX5 NFIA MAFG SPC25 CERS6-AS1 NOSTRIN GC02M168607 RNU6-766P
GH02F168796 0.6 Ensembl ENCODE 0.4 -10.9 -10934 3.6 HDGF PKNOX1 ATF1 ARNT CREB3L1 YBX1 ELK1 GATA2 SMARCA4 PBX2 NOSTRIN G6PC2 CERS6-AS1 GC02M168846
GH02F168801 0.6 ENCODE 0.3 -16.2 -16160 3.6 PKNOX1 ATF1 ARNT SIN3A ZNF766 TBX21 SMARCB1 SMARCA4 PBX2 KDM1A NOSTRIN CERS6-AS1 GC02M168846
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CERS6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CERS6-AS1 Gene

Chromosome:
2
Start:
168,771,951 bp from pter
End:
168,786,961 bp from pter
Size:
15,011 bases
Orientation:
Minus strand

Genomic View for CERS6-AS1 Gene

Genes around CERS6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CERS6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CERS6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CERS6-AS1 Gene

Proteins for CERS6-AS1 Gene

Post-translational modifications for CERS6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CERS6-AS1 Gene

Domains & Families for CERS6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CERS6-AS1 Gene

Function for CERS6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CERS6-AS1 Gene

Localization for CERS6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CERS6-AS1 Gene

Pathways & Interactions for CERS6-AS1 Gene

SuperPathways for CERS6-AS1 Gene

No Data Available

Interacting Proteins for CERS6-AS1 Gene

Gene Ontology (GO) - Biological Process for CERS6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CERS6-AS1 Gene

Transcripts for CERS6-AS1 Gene

mRNA/cDNA for CERS6-AS1 Gene

(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CERS6-AS1 Gene

No ASD Table

Relevant External Links for CERS6-AS1 Gene

GeneLoc Exon Structure for
CERS6-AS1
ECgene alternative splicing isoforms for
CERS6-AS1

Expression for CERS6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CERS6-AS1 Gene

genes like me logo Genes that share expression patterns with CERS6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CERS6-AS1 Gene

Orthologs for CERS6-AS1 Gene

Evolution for CERS6-AS1 Gene

ENSEMBL:
Gene Tree for CERS6-AS1 (if available)
TreeFam:
Gene Tree for CERS6-AS1 (if available)

No data available for Orthologs for CERS6-AS1 Gene

Paralogs for CERS6-AS1 Gene

No data available for Paralogs for CERS6-AS1 Gene

Variants for CERS6-AS1 Gene

Sequence variations from dbSNP and Humsavar for CERS6-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10173825 -- 168,778,339(+) acata(A/G)cagct intron-variant
rs10183556 -- 168,781,140(+) GTTAC(A/G)TTCCA intron-variant
rs10186357 -- 168,778,512(+) cctag(A/T)gaaac intron-variant
rs10188453 -- 168,784,218(+) ccctg(C/T)ctcaa intron-variant
rs10189458 -- 168,779,198(+) taatc(C/T)cttct intron-variant

Relevant External Links for CERS6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CERS6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CERS6-AS1 Gene

Disorders for CERS6-AS1 Gene

Relevant External Links for CERS6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CERS6-AS1

No disorders were found for CERS6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CERS6-AS1 Gene

Publications for CERS6-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CERS6-AS1 Gene

Sources for CERS6-AS1 Gene

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