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Aliases for CERS6-AS1 Gene

Subcategory (RNA class) for CERS6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CERS6-AS1 Gene

  • CERS6 Antisense RNA 1 2 3 5

External Ids for CERS6-AS1 Gene

Previous GeneCards Identifiers for CERS6-AS1 Gene

  • GC02M169630

Summaries for CERS6-AS1 Gene

GeneCards Summary for CERS6-AS1 Gene

CERS6-AS1 (CERS6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CERS6-AS1 Gene

Genomics for CERS6-AS1 Gene

Regulatory Elements for CERS6-AS1 Gene

Enhancers for CERS6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G168764 0.6 ENCODE 11.6 +21.0 21028 2.0 JUND POLR2A SMARCA4 HLF FOS HOMEZ G6PC2 CERS6-AS1 NOSTRIN GC02M168607 RNU6-766P
GH02G168820 0.3 FANTOM5 10.6 -33.8 -33761 0.0 CERS6-AS1 NOSTRIN GC02M168846
GH02G168796 1.3 Ensembl ENCODE 0.4 -10.9 -10934 3.6 HDGF PKNOX1 FOXA2 CREB3L1 ARNT YBX1 ZNF766 KLF13 ZNF592 SMARCA4 NOSTRIN G6PC2 CERS6-AS1 GC02M168846
GH02G168801 1.3 Ensembl ENCODE 0.4 -16.2 -16160 3.6 PKNOX1 ATF1 ARNT SIN3A TCF12 ZNF766 TBX21 SMARCB1 ZNF592 SMARCA4 NOSTRIN CERS6-AS1 GC02M168846
GH02G168824 0.9 ENCODE 0.3 -38.8 -38836 2.6 HDAC1 TBP FOXA2 MLX DMAP1 THRB ZSCAN9 YY1 SLC30A9 MIXL1 G6PC2 NOSTRIN GC02M168846 CERS6-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CERS6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CERS6-AS1 Gene

Chromosome:
2
Start:
168,771,951 bp from pter
End:
168,786,961 bp from pter
Size:
15,011 bases
Orientation:
Minus strand

Genomic View for CERS6-AS1 Gene

Genes around CERS6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CERS6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CERS6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CERS6-AS1 Gene

Proteins for CERS6-AS1 Gene

Post-translational modifications for CERS6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CERS6-AS1 Gene

Domains & Families for CERS6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CERS6-AS1 Gene

Function for CERS6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CERS6-AS1 Gene

Localization for CERS6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CERS6-AS1 Gene

Pathways & Interactions for CERS6-AS1 Gene

SuperPathways for CERS6-AS1 Gene

No Data Available

Interacting Proteins for CERS6-AS1 Gene

Gene Ontology (GO) - Biological Process for CERS6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CERS6-AS1 Gene

Drugs & Compounds for CERS6-AS1 Gene

No Compound Related Data Available

Transcripts for CERS6-AS1 Gene

mRNA/cDNA for CERS6-AS1 Gene

(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CERS6-AS1 Gene

No ASD Table

Relevant External Links for CERS6-AS1 Gene

GeneLoc Exon Structure for
CERS6-AS1
ECgene alternative splicing isoforms for
CERS6-AS1

Expression for CERS6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CERS6-AS1 Gene

genes like me logo Genes that share expression patterns with CERS6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CERS6-AS1 Gene

Orthologs for CERS6-AS1 Gene

Evolution for CERS6-AS1 Gene

ENSEMBL:
Gene Tree for CERS6-AS1 (if available)
TreeFam:
Gene Tree for CERS6-AS1 (if available)

No data available for Orthologs for CERS6-AS1 Gene

Paralogs for CERS6-AS1 Gene

No data available for Paralogs for CERS6-AS1 Gene

Variants for CERS6-AS1 Gene

Sequence variations from dbSNP and Humsavar for CERS6-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000135498 -- 168,778,877(+) GGCAC(A/G)AGGGT intron-variant
rs1000175749 -- 168,775,756(+) CCACC(C/G)CCAAC intron-variant
rs1000417381 -- 168,775,509(+) CTCAT(C/T)GGAGT intron-variant
rs1000805612 -- 168,781,564(+) AAGAA(G/T)AATTT intron-variant
rs1000870722 -- 168,786,340(+) TCTCC(C/T)GACAG intron-variant, upstream-variant-2KB

Relevant External Links for CERS6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CERS6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CERS6-AS1 Gene

Disorders for CERS6-AS1 Gene

Relevant External Links for CERS6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CERS6-AS1

No disorders were found for CERS6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CERS6-AS1 Gene

Publications for CERS6-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CERS6-AS1 Gene

Sources for CERS6-AS1 Gene

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