Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CERS3-AS1 Gene

Subcategory (RNA class) for CERS3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CERS3-AS1 Gene

  • CERS3 Antisense RNA 1 2 3 5

External Ids for CERS3-AS1 Gene

Summaries for CERS3-AS1 Gene

GeneCards Summary for CERS3-AS1 Gene

CERS3-AS1 (CERS3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CERS3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CERS3-AS1 Gene

Genomics for CERS3-AS1 Gene

Regulatory Elements for CERS3-AS1 Gene

Enhancers for CERS3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H099563 1.4 ENCODE dbSUPER 18.9 -806.5 -806482 5.5 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B ENSG00000259921 HSP90B2P CERS3-AS1 TTC23 LYSMD4 MEF2A ENSG00000201724 GC15M099683
GH15H100939 1.6 FANTOM5 Ensembl ENCODE dbSUPER 14 +568.1 568124 2.3 HDGF PKNOX1 RB1 ZSCAN4 MAX BACH1 SIN3A YBX1 EBF1 POLR2A LRRK1 CERS3-AS1 LOC100419174 LINS1 CHSY1 LOC101927751 PIR34573
GH15H101293 1.4 FANTOM5 ENCODE 14 +922.4 922416 4.7 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B ZNF766 CBX5 LINS1 WASH3P SNRPA1 CERS3-AS1 PRKXP1 LOC100419174 ASB7 RNU6-807P ENSG00000270127 TARSL2
GH15H099473 1.6 FANTOM5 Ensembl ENCODE dbSUPER 9.8 -896.9 -896923 5.2 TBP JUN MAX BATF RAD21 ZNF644 RARA ZNF316 GATA3 POLR2A CERS3-AS1 MEF2A ENSG00000279846 ENSG00000259341
GH15H101254 1.2 Ensembl ENCODE 12.4 +882.7 882722 2 PKNOX1 FOXA2 ATF1 ARNT ARID4B FEZF1 TCF12 CBX5 GATA2 FOS LINS1 CERS3-AS1 SNRPA1 LRRK1 LOC100419174 LOC100128108 ASB7 CHSY1 GC15M101273 PIR39927
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CERS3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CERS3-AS1 Gene

Genomic Locations for CERS3-AS1 Gene
chr15:100,372,939-100,437,914
(GRCh38/hg38)
Size:
64,976 bases
Orientation:
Plus strand
chr15:100,913,144-100,978,119
(GRCh37/hg19)

Genomic View for CERS3-AS1 Gene

Genes around CERS3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CERS3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CERS3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CERS3-AS1 Gene

Proteins for CERS3-AS1 Gene

Post-translational modifications for CERS3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CERS3-AS1 Gene

Domains & Families for CERS3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CERS3-AS1 Gene

Function for CERS3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CERS3-AS1 Gene

Localization for CERS3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CERS3-AS1 Gene

Pathways & Interactions for CERS3-AS1 Gene

SuperPathways for CERS3-AS1 Gene

No Data Available

Interacting Proteins for CERS3-AS1 Gene

Gene Ontology (GO) - Biological Process for CERS3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CERS3-AS1 Gene

Drugs & Compounds for CERS3-AS1 Gene

No Compound Related Data Available

Transcripts for CERS3-AS1 Gene

mRNA/cDNA for CERS3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CERS3-AS1 Gene

No ASD Table

Relevant External Links for CERS3-AS1 Gene

GeneLoc Exon Structure for
CERS3-AS1
ECgene alternative splicing isoforms for
CERS3-AS1

Expression for CERS3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CERS3-AS1 Gene

genes like me logo Genes that share expression patterns with CERS3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CERS3-AS1 Gene

Orthologs for CERS3-AS1 Gene

Evolution for CERS3-AS1 Gene

ENSEMBL:
Gene Tree for CERS3-AS1 (if available)
TreeFam:
Gene Tree for CERS3-AS1 (if available)

No data available for Orthologs for CERS3-AS1 Gene

Paralogs for CERS3-AS1 Gene

No data available for Paralogs for CERS3-AS1 Gene

Variants for CERS3-AS1 Gene

Sequence variations from dbSNP and Humsavar for CERS3-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000038683 -- 100,372,966(+) GGAAA(C/G)AGAGA nc-transcript-variant
rs1000109412 -- 100,401,970(+) CTTTC(C/T)TGGCA intron-variant, utr-variant-3-prime
rs1000180191 -- 100,394,444(+) AACAT(A/T)GCTGA intron-variant
rs1000191670 -- 100,406,269(+) TTAGA(A/T)AAGAA intron-variant
rs1000201482 -- 100,405,965(+) AGAAT(A/G)TTTTC intron-variant

Relevant External Links for CERS3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CERS3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CERS3-AS1 Gene

Disorders for CERS3-AS1 Gene

Relevant External Links for CERS3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CERS3-AS1

No disorders were found for CERS3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CERS3-AS1 Gene

Publications for CERS3-AS1 Gene

No publications were found for CERS3-AS1 Gene.

Products for CERS3-AS1 Gene

Sources for CERS3-AS1 Gene

Content
Loading form....