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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CERK Gene

protein-coding   GIFtS: 59
GCID: GC22M047080

ceramide kinase

 Explore 11 diseases affiliated with
CERK via our new
 Human Malady Compendium 
Biological research products
for CERK
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ceramide Kinase1 2     Lipid Kinase 42 3
LK41 2 3     DKFZp434E02111
HCERK1     FLJ214301
DA59H18.21     FLJ232391
DA59H18.31     Lipid Kinase LK42
KIAA16461 3     EC 2.7.1.1383
Acylsphingosine Kinase2 3     

External Ids:    HGNC: 192561   Entrez Gene: 647812   Ensembl: ENSG000001004227   OMIM: 6103075   UniProtKB: Q8TCT03   

Export aliases for CERK gene to outside databases

Previous GC identifers: GC22M043648 GC22M045292 GC22M045400 GC22M030025


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CERK:
CERK converts ceramide to ceramide 1-phosphate (C1P), a sphingolipid metabolite. Both CERK and C1P have been implicated
in various cellular processes, including proliferation, apoptosis, phagocytosis, and inflammation (Kim et al., 2006
(PubMed 16488390)).(supplied by OMIM, Mar 2008)

UniProtKB/Swiss-Prot: CERK1_HUMAN, Q8TCT0
Function: Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Acts efficiently on
natural and analog ceramides (C6, C8, C16 ceramides, and C8-dihydroceramide), to a lesser extent on C2-ceramide and
C6-dihydroceramide, but not on other lipids, such as various sphingosines. Binds phosphoinositides

summary for CERK:
Ceramide kinase catalyzes the addition of a phosphate group to ceramide, generating ceramide-1-phosphate.

Gene Wiki entry for CERK


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011520.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CERK gene promoter:
         c-Fos   Pax-5   AP-1   ATF-2   Nkx2-5   c-Jun   GATA-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCERK promoter sequence
   Search SABiosciences Chromatin IP Primers for CERK

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CERK


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22q13.31   Ensembl cytogenetic band:  22q13.31   HGNC cytogenetic band: 22q13.31

CERK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CERK gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22M047080:  view genomic region     (about GC identifiers)

Start:
47,080,307 bp from pter      End:
47,134,158 bp from pter
Size:
53,852 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CERK1_HUMAN, Q8TCT0 (See protein sequence)
Recommended Name: Ceramide kinase  
Size: 537 amino acids; 59977 Da
Cofactor: Calcium
Cofactor: Magnesium
Subcellular location: Cytoplasm. Membrane; Peripheral membrane protein
Secondary accessions: A0JNT4 A8K611 Q9BYB3 Q9UGE5

Explore the universe of human proteins at neXtProt for CERK: NX_Q8TCT0

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8TCT0

  • CERK Protein expression data from MOPED and PaxDb:    About this image 
    CERK Protein Expression
    REFSEQ proteins: NP_073603.2  
    ENSEMBL proteins: 
     ENSP00000216264   ENSP00000400859   ENSP00000438659  
    Reactome Protein details: Q8TCT0
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    Uscn Proteins for CERK

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000299integral to membrane of membrane fraction ----
    GO:0005634nucleus IDA--
    GO:0005737cytoplasm IDA--
    GO:0005739mitochondrion IEA--
    GO:0005886plasma membrane TAS--

    CERK for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CERK for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001206 Diacylglycerol_kinase_cat_dom
     IPR001849 Pleckstrin_homology

    Graphical View of Domain Structure for InterPro Entry Q8TCT0

    ProtoNet protein and cluster: Q8TCT0

    1 Blocks protein family: IPB001849 Pleckstrin-like

    UniProtKB/Swiss-Prot: CERK1_HUMAN, Q8TCT0
    Similarity: Contains 1 DAGKc domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: CERK1_HUMAN, Q8TCT0
    Function: Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Acts efficiently on
    natural and analog ceramides (C6, C8, C16 ceramides, and C8-dihydroceramide), to a lesser extent on C2-ceramide and
    C6-dihydroceramide, but not on other lipids, such as various sphingosines. Binds phosphoinositides
    Catalytic activity: ATP + ceramide = ADP + ceramide 1-phosphate
    Enzyme regulation: Inhibited by sulfatide
    Biophysicochemical properties: pH dependence: Optimum pH is 6.0-7.5;

         Enzyme Number (IUBMB): EC 2.7.1.1381

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000287magnesium ion binding IDA10947957
    GO:0001729ceramide kinase activity IDA19501188
    GO:0004143diacylglycerol kinase activity IEA--
    GO:0005524ATP binding IEA--
    GO:0005543phospholipid binding IEA--
         
    CERK for ontologies           About GeneDecksing


    Phenotypes:
         3 GenomeRNAi human phenotypes for CERK:
     Increased apoptosis  Increased cell death in HCC-19  Increased telomerase activity 

         6 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Cerk):
     behavior/neurological  digestive/alimentary  growth/size  hematopoietic system  immune system 
     mortality/aging 

    CERK for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for CERK: Cerktm1Fbor Cerktm1Yiga
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CERK 

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    hsa-miR-3671 hsa-miR-22 hsa-miR-576-5p hsa-miR-634 hsa-miR-137 hsa-miR-513a-3p hsa-miR-513c hsa-miR-219-5p
    SwitchGear 3'UTR luciferase reporter plasmidCERK 3' UTR sequence
    Inhib. RNA
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Sphingolipid metabolism
    Sphingolipid metabolism1.00
    Sphingolipid metabolism0.54
    Glycosphingolipid metabolism0.54
    2TNF-Induced Apoptosis Implicating Sphingolipids
    TNF-Induced Apoptosis Implicating Sphingolipids1.00
    Ceramide Pathway0.32
    3Metabolism
    Metabolism1.00
    Metabolism of lipids and lipoproteins0.34
    4Integrated Breast Cancer Pathway
    Integrated Breast Cancer Pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CERK
        Ceramide Pathway
    TNF-Induced Apoptosis Implicating Sphingolipids

    1 BioSystems Pathway for CERK 
        Integrated Breast Cancer Pathway

    4        Reactome Pathways for CERK
        Sphingolipid metabolism
    Glycosphingolipid metabolism
    Metabolism
    Metabolism of lipids and lipoproteins


    1         Kegg Pathway  (Kegg details for CERK):
        Sphingolipid metabolism


    CERK for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CERK

    STRING Interaction Network Preview (showing 5 interactants - click image to see 18)

    5/19 Interacting proteins for CERK (Q8TCT03 ENSP000002162644) via UniProtKB, MINT, STRING, and/or I2D (see all 19)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PPP6R1Q9UPN73I2D: score=5 
    ACER1ENSP000003014524STRING: ENSP00000301452
    ACER2ENSP000003426094STRING: ENSP00000342609
    ASAH1ENSP000003711524STRING: ENSP00000371152
    ASAH2ENSP000003788974STRING: ENSP00000378897
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006644phospholipid metabolic process TAS--
    GO:0006665sphingolipid metabolic process TAS--
    GO:0006672ceramide metabolic process TAS11956206
    GO:0006687glycosphingolipid metabolic process TAS--
    GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway IEA--

    CERK for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CERK for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for CERK available from Tocris Bioscience    About this table
    CompoundAction CAS #
    NVP 231 Potent, selective and reversible CerK inhibitor [362003-83-6]

    10/39 HMDB Compounds for CERK (see all 39)    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    CalciumCa (see all 2)7440-70-2--
    Cer(d18:0/12:0) ----
    Cer(d18:0/14:0) ----
    Cer(d18:0/16:0) ----
    Cer(d18:0/18:0) ----
    Cer(d18:0/18:1(11Z)) ----
    Cer(d18:0/18:1(9Z)) ----
    Cer(d18:0/20:0) ----
    9 Novoseek chemical compound relationships for CERK gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ceramide 1-phosphate 98.6 85 12855693 (4), 19101626 (3), 16488390 (3), 17392267 (3) (see all 32)
    ceramide 92.8 196 12855693 (6), 12927832 (6), 18206978 (5), 19101626 (4) (see all 62)
    sphingosine 79.9 10 16170208 (2), 15585321 (2), 13129923 (1), 17351295 (1) (see all 8)
    c2ceramide 75.7 3 17338639 (2)
    ceramides 73.2 7 19101626 (2), 18831956 (2), 16170208 (1), 12927832 (1)
    lipid 48.2 19 12927832 (3), 15899891 (2), 17351295 (1), 15464297 (1) (see all 10)
    arachidonic acid 31.1 7 12855693 (4), 19101626 (2), 14676210 (1)
    calcium 20.4 12 8245978 (2), 18156590 (2), 14769792 (2), 16203736 (1) (see all 6)
    atp 12.4 1 18206978 (1)

    Search CenterWatch for drugs/clinical trials and news about CERK / CERK1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CERK gene (2 alternative transcripts): 
    NM_182661.1  NM_022766.5  

    Unigene Cluster for CERK:

    Ceramide kinase
    Hs.200668  [show with all ESTs]
    Unigene Representative Sequence: NM_022766
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000216264(uc010hae.3 uc003bia.3) ENST00000443629 ENST00000471929
    ENST00000460254 ENST00000541677

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    hsa-miR-3671 hsa-miR-22 hsa-miR-576-5p hsa-miR-634 hsa-miR-137 hsa-miR-513a-3p hsa-miR-513c hsa-miR-219-5p
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    Additional cDNA sequence: 

    AB051433.1 AB079066.1 AJ457828.1 AK025083.1 AK026892.1 AK291476.1 AL137600.1 AL832794.1 
    AY927550.1 BC004278.1 BC008382.1 BC067255.1 BC108712.1 BC126940.1 CR456404.1 CR457365.1 

    11 DOTS entries:

    DT.441741  DT.99929377  DT.95198581  DT.95211276  DT.99976536  DT.100784669  DT.95268094  DT.97785411 
    DT.99928430  DT.120647370  DT.91699418 

    24/189 AceView cDNA sequences (see all 189):

    BX952302 AK026892 AI679943 AI610717 AI679433 CR597559 CA443049 AI299775 
    AL137600 BC004278 BM737702 AI694771 CD631565 BM846741 AK025083 BM697053 
    BM479389 H55199 H55443 NM_022766 CR609594 AI131493 AA682589 AA679575 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CERK expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCTGGTTCCT
    CERK Expression
    About this image

    CERK expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    4 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    CartilageCervical Intervertebral DiscIntervertebral Disc Annulus Fibrosus CellsCartilage
    CartilageLumbar Intervertebral DiscIntervertebral Disc Annulus Fibrosus CellsCartilage
    CartilageSacral Intervertebral DiscIntervertebral Disc Annulus Fibrosus CellsCartilage
    CartilageThoracic Intervertebral DiscIntervertebral Disc Annulus Fibrosus CellsCartilage
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See CERK Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CERK

    SOURCE GeneReport for Unigene cluster: Hs.200668

    UniProtKB/Swiss-Prot: CERK1_HUMAN, Q8TCT0
    Tissue specificity: High level expression in heart, brain, skeletal muscle, kidney and liver; moderate in peripheral
    blood leukocytes and thymus; very low in spleen, small intestine, placenta and lung

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CERK gene from 8/24 species (see all 24)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CERK1 ceramide kinase 67.51(n)
    67.9(a)
      425523  NM_001031340.1  NP_001026511.1 
    lizard
    (Anolis carolinensis)
    Reptilia CERK6
    --
    64(a)
    1 ↔ 1
    5(72566676-72596368)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.96452 Xenopus laevis transcribed sequence with weak similarity more 70.98(n)    BJ615281.1 
    zebrafish
    (Danio rerio)
    Actinopterygii cerk1 ceramide kinase 62.57(n)
    59.82(a)
      558496  NM_001105586.1  NP_001099056.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Cerk1 Ceramide kinase 46.82(n)
    40.92(a)
      40640  NM_141273.2  NP_649530.2 
    worm
    (Caenorhabditis elegans)
    Secernentea T10B11.21 Protein T10B11.2 43.89(n)
    35.16(a)
      172423  NM_059576.3  NP_491977.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT5G512901 diacylglycerol kinase family protein 47.23(n)
    40.48(a)
      835203  NM_124508.3  NP_568756.2 
    rice
    (Oryza sativa)
    Liliopsida --
    ceramide kinase-related, putative, expressed
    30(a)
    1 ↔ 1
    2(26498487-26501649)


    ENSEMBL Gene Tree for CERK (if available)
    TreeFam Gene Tree for CERK (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CERK gene
    CERKL2  SPHK12  SPHK22  AGK2  

    CERK for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1324 NCBI SNPs in CERK are shown (see all 1324    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 22 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1837573521,2
    --47079839(+) AGGCAA/GGAGAA 1 -- ds50010--------
    rs1401686771,2
    --47079848(+) AATGGC/TGTGAA 1 -- ds50010--------
    rs48235711,2
    A--47079863(+) GGAGGC/TGAGCT 1 -- ds50010--------
    rs1468355371,2
    --47079876(+) CAGTGA/GGCCAA 1 -- ds50010--------
    rs1406602511,2
    --47079904(+) ATTGCA/GCCACT 1 -- ds50010--------
    rs1419695341,2
    --47079941(+) AACTCC/TGTCTC 1 -- ds50010--------
    rs1126318781,2
    --47080011(+) AACACG/ATTTCC 1 -- ds50011Minor allele frequency- A:0.50CSA 2
    rs1884785151,2
    --47080017(+) TTTCCC/TTTGGA 1 -- ds50010--------
    rs8017241,2
    C,F,O,A,H--47080026(-) TGCTCT/CTTATC 1 -- ds500122Minor allele frequency- C:0.42NS EA WA NA CSA 2348
    rs1118746171,2
    C--47080035(+) CAAAAC/GCTGCA 1 -- ds50012Minor allele frequency- G:0.04NA WA 120

    HapMap Linkage Disequilibrium report for CERK (47080307 - 47134158 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for CERK
         1 CNV: 5190

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CERK for disorders           About GeneDecksing

    OMIM gene information: 610307    OMIM disorders: --

    11 diseases for CERK:    About MalaCards
    retinitis pigmentosa    retinal degeneration    retinitis    lung adenocarcinoma
    adenocarcinoma    prostate cancer    breast cancer    neuroblastoma
    prostatitis    malaria    leukemia

    2 Novoseek disease relationships for CERK gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    retinitis pigmentosa 55.3 1 16581028 (1)
    inflammation 3.38 1 18691014 (1)

    Human Genome Epidemiology (HuGE) Navigator: CERK (2 documents)

    Export disorders for CERK gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CERK gene, integrated from 9 sources (see all 80):
    (articles sorted by number of sources associating them with CERK)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Ceramide kinase, a novel lipid kinase. Molecular cloning and functional characterization. (PubMed id 11956206)1, 2, 3 Sugiura M....Kohama T. (2002)
    2. Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping. (PubMed id 11258795)1, 2, 3 Hirosawa M....Ohara O. (2001)
    3. A genome annotation-driven approach to cloning the human ORFeome. (PubMed id 15461802)1, 2 Collins J.E.... Dunham I. (2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)
    6. Substrate specificity of human ceramide kinase. (PubMed id 16170208)1, 9 Wijesinghe D.S....Chalfant C.E. (2005)
    7. Subcellular localization of ceramide kinase and ceram ide kinase-like protein requires interplay of their Pleckstrin Homology domain- containing N-terminal regions together with C-terminal domains. (PubMed id 19501188)1, 9 Rovina P....Bornancin F. (2009)
    8. The interaction between the pleckstrin homology domain of ceramide kinase and phosphatidylinositol 4,5-bisphosphate regulates the plasma membrane targeting and ceramide 1-phosphate levels. (PubMed id 16488390)1, 9 Kim T.J....Igarashi Y. (2006)
    9. Ceramide kinase promotes Ca2+ signaling near IgG-opsonized targets and enhances phagolysosomal fusion in COS-1 cells. (PubMed id 18156590)1, 9 Hinkovska-Galcheva V....Boxer L.A. (2008)
    10. Ceramide kinase uses ceramide provided by ceramide transport protein: localization to organelles of eicosanoid synthesis. (PubMed id 17392267)1, 9 Lamour N.F....Chalfant C.E. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 64781 HGNC: 19256 AceView: CERK Ensembl:ENSG00000100422 euGenes: HUgn64781
    ECgene: CERK Kegg: 64781 H-InvDB: CERK

    (According to HUGE)
    About This Section
    HUGE: KIAA1646

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CERK Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CERK gene:
    Search GeneIP for patents involving CERK

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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