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Aliases for CENPVL2 Gene

Aliases for CENPVL2 Gene

  • Centromere Protein V Like 2 2 3 5
  • Centromere Protein V Pseudogene 2 2 3
  • CENPVP2 3

External Ids for CENPVL2 Gene

Previous HGNC Symbols for CENPVL2 Gene

  • CENPVP2

Summaries for CENPVL2 Gene

GeneCards Summary for CENPVL2 Gene

CENPVL2 (Centromere Protein V Like 2) is a Pseudogene. An important paralog of this gene is CENPVL1.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CENPVL2 Gene

Genomics for CENPVL2 Gene

Genomic Location for CENPVL2 Gene

Chromosome:
X
Start:
51,681,212 bp from pter
End:
51,682,831 bp from pter
Size:
1,620 bases
Orientation:
Minus strand

Genomic View for CENPVL2 Gene

Genes around CENPVL2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CENPVL2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CENPVL2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CENPVL2 Gene

No data available for Regulatory Elements for CENPVL2 Gene

Proteins for CENPVL2 Gene

  • Protein details for CENPVL2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RR11
    Recommended name:
    Centromere protein V-like 1
    Protein Accession:
    A0A0U1RR11

    Protein attributes for CENPVL2 Gene

    Size:
    272 amino acids
    Molecular mass:
    29887 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CENPVL2 Gene

Post-translational modifications for CENPVL2 Gene

No Post-translational modifications

Other Protein References for CENPVL2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for CENPVL2 Gene

Domains & Families for CENPVL2 Gene

Protein Domains for CENPVL2 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CENPVL2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CENPVL2 Gene

Function for CENPVL2 Gene

Gene Ontology (GO) - Molecular Function for CENPVL2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016846 carbon-sulfur lyase activity IEA --
genes like me logo Genes that share ontologies with CENPVL2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CENPVL2 Gene

Localization for CENPVL2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CENPVL2 Gene

Pathways & Interactions for CENPVL2 Gene

SuperPathways for CENPVL2 Gene

No Data Available

Interacting Proteins for CENPVL2 Gene

Gene Ontology (GO) - Biological Process for CENPVL2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CENPVL2 Gene

Transcripts for CENPVL2 Gene

mRNA/cDNA for CENPVL2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CENPVL2 Gene

No ASD Table

Relevant External Links for CENPVL2 Gene

GeneLoc Exon Structure for
CENPVL2
ECgene alternative splicing isoforms for
CENPVL2

Expression for CENPVL2 Gene

NURSA nuclear receptor signaling pathways regulating expression of CENPVL2 Gene:

CENPVL2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CENPVL2 Gene

Orthologs for CENPVL2 Gene

Evolution for CENPVL2 Gene

ENSEMBL:
Gene Tree for CENPVL2 (if available)
TreeFam:
Gene Tree for CENPVL2 (if available)

No data available for Orthologs for CENPVL2 Gene

Paralogs for CENPVL2 Gene

Paralogs for CENPVL2 Gene

genes like me logo Genes that share paralogs with CENPVL2: view

Variants for CENPVL2 Gene

Sequence variations from dbSNP and Humsavar for CENPVL2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs893662 -- 51,683,336(-) AACAT(C/T)AGGTA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CENPVL2 Gene

Variant ID Type Subtype PubMed ID
esv1003997 OTHER inversion 20482838
esv3350872 OTHER inversion 20981092
nsv1147181 CNV duplication 26484159
nsv499710 OTHER inversion 21111241
nsv7444 OTHER inversion 18451855

Relevant External Links for CENPVL2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CENPVL2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CENPVL2 Gene

Disorders for CENPVL2 Gene

Relevant External Links for CENPVL2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CENPVL2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CENPVL2

No disorders were found for CENPVL2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CENPVL2 Gene

Publications for CENPVL2 Gene

  1. Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow. (PMID: 27250503) Wright J.C. … Harrow J. (Nat Commun 2016) 2 3 64

Products for CENPVL2 Gene

Sources for CENPVL2 Gene

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