Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CELF2-AS2 Gene

Subcategory (RNA class) for CELF2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CELF2-AS2 Gene

  • CELF2 Antisense RNA 2 2 3 5

External Ids for CELF2-AS2 Gene

Previous GeneCards Identifiers for CELF2-AS2 Gene

  • GC10M011118

Summaries for CELF2-AS2 Gene

GeneCards Summary for CELF2-AS2 Gene

CELF2-AS2 (CELF2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CELF2-AS2 Gene

Genomics for CELF2-AS2 Gene

Regulatory Elements for CELF2-AS2 Gene

Enhancers for CELF2-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G011160 2 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -67.4 -67367 24.1 HDGF PKNOX1 CREB3L1 ARNT WRNIP1 SIN3A YY1 ZNF766 CBX5 ZNF143 CELF2 CELF2-AS2 GC10M011171 ENSG00000230322
GH10G011143 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -42.9 -42914 8.8 FEZF1 TCF12 ZNF766 FOS MAFF SMARCA4 GLIS1 PBX2 KDM1A PRDM4 ENSG00000230322 CELF2-AS2 CELF2 GC10M011141 GC10M011168
GH10G011241 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -139.4 -139441 6.8 HDGF PKNOX1 ZNF493 WRNIP1 SIN3A GLI4 YBX1 ZNF143 FOS KLF7 CELF2-AS1 CELF2-AS2 CELF2 GC10M011231 GC10P011177
GH10G011007 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +91.3 91261 13.4 PKNOX1 FEZF1 GLIS2 FOS ZNF263 SP3 SMARCA4 GLIS1 HMBOX1 KDM1A CELF2 CELF2-AS2 LOC105376404 GC10P011015
GH10G011260 1.7 dbSUPER 9.4 -159.1 -159120 7.9 PKNOX1 MXI1 CBX3 ZBED1 EP300 POLR2A CBX5 SCRT2 ZNF143 MAFK CELF2-AS1 CELF2-AS2 GC10M011258 GC10M011275
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CELF2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CELF2-AS2 Gene

Chromosome:
10
Start:
11,071,541 bp from pter
End:
11,105,504 bp from pter
Size:
33,964 bases
Orientation:
Minus strand

Genomic View for CELF2-AS2 Gene

Genes around CELF2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CELF2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CELF2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CELF2-AS2 Gene

Proteins for CELF2-AS2 Gene

Post-translational modifications for CELF2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CELF2-AS2 Gene

Domains & Families for CELF2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CELF2-AS2 Gene

Function for CELF2-AS2 Gene

Phenotypes for CELF2-AS2 Gene

GenomeRNAi human phenotypes for CELF2-AS2:
genes like me logo Genes that share phenotypes with CELF2-AS2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CELF2-AS2 Gene

Localization for CELF2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CELF2-AS2 Gene

Pathways & Interactions for CELF2-AS2 Gene

SuperPathways for CELF2-AS2 Gene

No Data Available

Interacting Proteins for CELF2-AS2 Gene

Gene Ontology (GO) - Biological Process for CELF2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CELF2-AS2 Gene

Drugs & Compounds for CELF2-AS2 Gene

No Compound Related Data Available

Transcripts for CELF2-AS2 Gene

mRNA/cDNA for CELF2-AS2 Gene

(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CELF2-AS2 Gene

CELF2 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CELF2-AS2 Gene

No ASD Table

Relevant External Links for CELF2-AS2 Gene

GeneLoc Exon Structure for
CELF2-AS2
ECgene alternative splicing isoforms for
CELF2-AS2

Expression for CELF2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CELF2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for CELF2-AS2 Gene

This gene is overexpressed in Testis (x38.3).

SOURCE GeneReport for Unigene cluster for CELF2-AS2 Gene:

Hs.568157
genes like me logo Genes that share expression patterns with CELF2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CELF2-AS2 Gene

Orthologs for CELF2-AS2 Gene

Evolution for CELF2-AS2 Gene

ENSEMBL:
Gene Tree for CELF2-AS2 (if available)
TreeFam:
Gene Tree for CELF2-AS2 (if available)

No data available for Orthologs for CELF2-AS2 Gene

Paralogs for CELF2-AS2 Gene

No data available for Paralogs for CELF2-AS2 Gene

Variants for CELF2-AS2 Gene

Sequence variations from dbSNP and Humsavar for CELF2-AS2 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000008989 -- 11,083,663(+) TTACT(C/T)TCTGC intron-variant
rs1000098050 -- 11,104,936(+) GCAGG(G/T)GCAGC intron-variant
rs1000148026 -- 11,088,204(+) CTGTG(C/T)ATTGA intron-variant
rs1000235695 -- 11,092,102(+) TAGAT(C/T)CTTCT intron-variant
rs1000347029 -- 11,072,796(+) ATTCA(C/T)TTAGG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for CELF2-AS2 Gene

Variant ID Type Subtype PubMed ID
esv3578628 CNV loss 25503493
esv3578629 CNV loss 25503493
esv3578630 CNV loss 25503493
nsv1047445 CNV gain 25217958
nsv1122489 CNV deletion 24896259
nsv437658 CNV loss 16327808
nsv5798 CNV insertion 18451855

Relevant External Links for CELF2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CELF2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CELF2-AS2 Gene

Disorders for CELF2-AS2 Gene

Relevant External Links for CELF2-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CELF2-AS2

No disorders were found for CELF2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CELF2-AS2 Gene

Publications for CELF2-AS2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for CELF2-AS2 Gene

Sources for CELF2-AS2 Gene

Content
Loading form....