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Aliases for CELF2-AS1 Gene

Subcategory (RNA class) for CELF2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CELF2-AS1 Gene

  • CELF2 Antisense RNA 1 2 3 4 5
  • CELF2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C10orf31 3 4
  • Chromosome 10 Open Reading Frame 31 2
  • CELF2 Antisense Gene Protein 1 4

External Ids for CELF2-AS1 Gene

Previous HGNC Symbols for CELF2-AS1 Gene

  • C10orf31

Previous GeneCards Identifiers for CELF2-AS1 Gene

  • GC10M011358

Summaries for CELF2-AS1 Gene

GeneCards Summary for CELF2-AS1 Gene

CELF2-AS1 (CELF2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CELF2-AS1 Gene

Genomics for CELF2-AS1 Gene

Regulatory Elements for CELF2-AS1 Gene

Enhancers for CELF2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F011241 1.5 FANTOM5 Ensembl ENCODE 10.8 +99.7 99730 6.8 HDGF PKNOX1 ZNF493 WRNIP1 SIN3A GLI4 YBX1 ZNF143 KLF7 FOS CELF2-AS1 CELF2-AS2 CELF2 GC10M011231 GC10P011177
GH10F011194 1.1 Ensembl ENCODE 10.2 +147.4 147352 5.8 HDGF PKNOX1 WRNIP1 FEZF1 ZNF121 ZNF366 CBX5 ZNF207 ETV6 CREM ENSG00000230322 CELF2-AS1 CELF2-AS2 GC10P011177 GC10M011231
GH10F011401 0.9 Ensembl ENCODE 11.1 -57.8 -57792 2.5 ESRRA ZNF146 ZMYM3 MAFG ZNF580 KDM1A NFE2 ZBTB33 EMSY CELF2-AS1 ENSG00000280086 GC10P011411
GH10F011329 1.6 ENCODE 5.7 +14.0 13986 1.4 ZNF362 NR2F1 NR2F6 NR2F2 NR2C2 CELF2-AS1 GC10P011330
GH10F011440 0.8 Ensembl ENCODE 11.1 -95.8 -95778 0.3 NFIL3 HLF EBF1 CREM RELA CELF2-AS1 GC10M011462 PIR61912 GC10P011411
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CELF2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CELF2-AS1 Gene

Chromosome:
10
Start:
11,316,833 bp from pter
End:
11,344,674 bp from pter
Size:
27,842 bases
Orientation:
Minus strand

Genomic View for CELF2-AS1 Gene

Genes around CELF2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CELF2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CELF2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CELF2-AS1 Gene

Proteins for CELF2-AS1 Gene

  • Protein details for CELF2-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7Q2-CEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein CELF2-AS1
    Protein Accession:
    Q8N7Q2
    Secondary Accessions:
    • A6NFV2

    Protein attributes for CELF2-AS1 Gene

    Size:
    184 amino acids
    Molecular mass:
    20470 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05176.1; Type=Frameshift; Positions=168; Evidence={ECO:0000305};

neXtProt entry for CELF2-AS1 Gene

Post-translational modifications for CELF2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CELF2-AS1 Gene

Domains & Families for CELF2-AS1 Gene

Protein Domains for CELF2-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CELF2-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CELF2-AS1 Gene

Function for CELF2-AS1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CELF2-AS1 Gene

Localization for CELF2-AS1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CELF2-AS1 Gene

Secreted.

Gene Ontology (GO) - Cellular Components for CELF2-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with CELF2-AS1: view

No data available for Subcellular locations from COMPARTMENTS for CELF2-AS1 Gene

Pathways & Interactions for CELF2-AS1 Gene

SuperPathways for CELF2-AS1 Gene

No Data Available

Interacting Proteins for CELF2-AS1 Gene

Gene Ontology (GO) - Biological Process for CELF2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CELF2-AS1 Gene

Transcripts for CELF2-AS1 Gene

mRNA/cDNA for CELF2-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CELF2-AS1 Gene

CELF2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CELF2-AS1 Gene

No ASD Table

Relevant External Links for CELF2-AS1 Gene

GeneLoc Exon Structure for
CELF2-AS1
ECgene alternative splicing isoforms for
CELF2-AS1

Expression for CELF2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CELF2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CELF2-AS1 Gene

This gene is overexpressed in Whole Blood (x7.5) and Testis (x4.6).

SOURCE GeneReport for Unigene cluster for CELF2-AS1 Gene:

Hs.729598
genes like me logo Genes that share expression patterns with CELF2-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CELF2-AS1 Gene

Orthologs for CELF2-AS1 Gene

Evolution for CELF2-AS1 Gene

ENSEMBL:
Gene Tree for CELF2-AS1 (if available)
TreeFam:
Gene Tree for CELF2-AS1 (if available)

No data available for Orthologs for CELF2-AS1 Gene

Paralogs for CELF2-AS1 Gene

No data available for Paralogs for CELF2-AS1 Gene

Variants for CELF2-AS1 Gene

Sequence variations from dbSNP and Humsavar for CELF2-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10450538 -- 11,319,733(+) GAATA(C/G)CCGAG intron-variant
rs10508421 -- 11,321,772(+) TTTCA(C/T)CGATC intron-variant
rs1050942 -- 11,325,892(+) ACCAG(C/G)ACATT intron-variant, reference, missense
rs1050946 -- 11,332,263(+) AAAAC(C/G)ACTTT intron-variant, utr-variant-3-prime
rs1051762 -- 11,336,445(+) GGAAC(A/C)CAATA intron-variant, utr-variant-3-prime

Relevant External Links for CELF2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CELF2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CELF2-AS1 Gene

Disorders for CELF2-AS1 Gene

Relevant External Links for CELF2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CELF2-AS1

No disorders were found for CELF2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CELF2-AS1 Gene

Publications for CELF2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  3. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 4 64

Products for CELF2-AS1 Gene

Sources for CELF2-AS1 Gene

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