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Aliases for CECR7 Gene

Subcategory (RNA class) for CECR7 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for CECR7 Gene

  • Cat Eye Syndrome Chromosome Region, Candidate 7 (Non-Protein Coding) 2 3
  • Cat Eye Syndrome Chromosome Region, Candidate 7 2
  • SAHL1 3

External Ids for CECR7 Gene

ORGUL Members for CECR7 Gene

Summaries for CECR7 Gene

GeneCards Summary for CECR7 Gene

CECR7 (Cat Eye Syndrome Chromosome Region, Candidate 7 (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class. Diseases associated with CECR7 include cat eye syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CECR7 Gene

Genomics for CECR7 Gene

Genomic Location for CECR7 Gene

Start:
17,036,570 bp from pter
End:
17,060,825 bp from pter
Size:
24,256 bases
Orientation:
Plus strand

Genomic View for CECR7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CECR7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CECR7 Gene

Regulatory Elements for CECR7 Gene

Proteins for CECR7 Gene

Post-translational modifications for CECR7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CECR7 Gene

Domains for CECR7 Gene

Gene Families for CECR7 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with CECR7: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for CECR7 Gene

Function for CECR7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CECR7 Gene

Localization for CECR7 Gene

No data available for Gene Ontology (GO) - Cellular Components for CECR7 Gene

Pathways for CECR7 Gene

SuperPathways for CECR7 Gene

No Data Available

Interacting Proteins for CECR7 Gene

Gene Ontology (GO) - Biological Process for CECR7 Gene

None

No data available for Pathways by source for CECR7 Gene

Transcripts for CECR7 Gene

mRNA/cDNA for CECR7 Gene

(6) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CECR7 Gene

Cat eye syndrome chromosome region, candidate 7 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CECR7 Gene

No ASD Table

Relevant External Links for CECR7 Gene

GeneLoc Exon Structure for
CECR7
ECgene alternative splicing isoforms for
CECR7

Expression for CECR7 Gene

mRNA expression in normal human tissues for CECR7 Gene

SOURCE GeneReport for Unigene cluster for CECR7 Gene Hs.660640

genes like me logo Genes that share expressions with CECR7: view

Orthologs for CECR7 Gene

Evolution for CECR7 Gene

ENSEMBL:
Gene Tree for CECR7 (if available)
TreeFam:
Gene Tree for CECR7 (if available)

No data available for Orthologs for CECR7 Gene

Paralogs for CECR7 Gene

No data available for Paralogs for CECR7 Gene

Variants for CECR7 Gene

Sequence variations from dbSNP and Humsavar for CECR7 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs482218 -- 17,036,210(-) CCCGC(C/T)TGGCC upstream-variant-2KB
rs508988 -- 17,035,612(-) aaact(A/C)tctgt upstream-variant-2KB
rs881623 -- 17,048,693(-) CACTC(A/G)GATAT intron-variant
rs928831 -- 17,043,313(-) gtgat(A/G)CTAGA intron-variant
rs928832 -- 17,043,300(-) AACGT(C/G)AGTGC intron-variant

Relevant External Links for CECR7 Gene

HapMap Linkage Disequilibrium report
CECR7

No data available for Structural Variations from Database of Genomic Variants (DGV) for CECR7 Gene

Disorders for CECR7 Gene

(1) MalaCards Diseases for CECR7 Gene

Search for CECR7 Gene in MalaCards »
genes like me logo Genes that share disorders with CECR7: view

No data available for UniProtKB/Swiss-Prot for CECR7 Gene

Publications for CECR7 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz T.K. … McDermid H.E. (Genome Res. 2001) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Three duplicons form a novel chimeric transcription unit in the pericentromeric region of chromosome 22q11. (PMID: 12483300) Bridgland L. … McDermid H.E. (Hum. Genet. 2003) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for CECR7 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CECR7
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CECR7
    • Block miRNA regulation of CECR7 using miScript Target Protectors

    Sources for CECR7 Gene

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