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Aliases for CECR5-AS1 Gene

Subcategory (RNA class) for CECR5-AS1 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for CECR5-AS1 Gene

  • CECR5 Antisense RNA 1 2 3
  • Cat Eye Syndrome Chromosome Region, Candidate 4 (Non-Protein Coding) 2 3
  • CECR5 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Cat Eye Syndrome Chromosome Region, Candidate 4 2
  • Non-Protein Coding RNA 17 2
  • NCRNA00017 3
  • CECR4 3

External Ids for CECR5-AS1 Gene

ORGUL Members for CECR5-AS1 Gene

Previous Symbols for CECR5-AS1 Gene

  • CECR4

Summaries for CECR5-AS1 Gene

GeneCards Summary for CECR5-AS1 Gene

CECR5-AS1 (CECR5 Antisense RNA 1) is an RNA Gene, and belongs to the antisense RNA class. Diseases associated with CECR5-AS1 include cat eye syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CECR5-AS1 Gene

Genomics for CECR5-AS1 Gene

Genomic Location for CECR5-AS1 Gene

Start:
17,159,384 bp from pter
End:
17,165,445 bp from pter
Size:
6,062 bases
Orientation:
Plus strand

Genomic View for CECR5-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CECR5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CECR5-AS1 Gene

No data available for Regulatory Elements for CECR5-AS1 Gene

Proteins for CECR5-AS1 Gene

Post-translational modifications for CECR5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CECR5-AS1 Gene

Domains for CECR5-AS1 Gene

Gene Families for CECR5-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CECR5-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CECR5-AS1 Gene

Function for CECR5-AS1 Gene

miRNA for CECR5-AS1 Gene

miRTarBase miRNAs that target CECR5-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for CECR5-AS1 Gene

Localization for CECR5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CECR5-AS1 Gene

Pathways for CECR5-AS1 Gene

SuperPathways for CECR5-AS1 Gene

No Data Available

Interacting Proteins for CECR5-AS1 Gene

Gene Ontology (GO) - Biological Process for CECR5-AS1 Gene

None

No data available for Pathways by source for CECR5-AS1 Gene

Transcripts for CECR5-AS1 Gene

mRNA/cDNA for CECR5-AS1 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CECR5-AS1 Gene

CECR5 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CECR5-AS1 Gene

No ASD Table

Relevant External Links for CECR5-AS1 Gene

GeneLoc Exon Structure for
CECR5-AS1
ECgene alternative splicing isoforms for
CECR5-AS1

Expression for CECR5-AS1 Gene

mRNA expression in normal human tissues for CECR5-AS1 Gene

SOURCE GeneReport for Unigene cluster for CECR5-AS1 Gene Hs.660066

genes like me logo Genes that share expressions with CECR5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for CECR5-AS1 Gene

Orthologs for CECR5-AS1 Gene

Evolution for CECR5-AS1 Gene

ENSEMBL:
Gene Tree for CECR5-AS1 (if available)
TreeFam:
Gene Tree for CECR5-AS1 (if available)

No data available for Orthologs for CECR5-AS1 Gene

Paralogs for CECR5-AS1 Gene

No data available for Paralogs for CECR5-AS1 Gene

Variants for CECR5-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for CECR5-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv509805 CNV Insertion 20534489
nsv828924 CNV Gain 20364138

Relevant External Links for CECR5-AS1 Gene

HapMap Linkage Disequilibrium report
CECR5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for CECR5-AS1 Gene

Disorders for CECR5-AS1 Gene

(1) MalaCards Diseases for CECR5-AS1 Gene

Search for CECR5-AS1 Gene in MalaCards »
genes like me logo Genes that share disorders with CECR5-AS1: view

No data available for UniProtKB/Swiss-Prot for CECR5-AS1 Gene

Publications for CECR5-AS1 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz T.K. … McDermid H.E. (Genome Res. 2001) 2 3

Products for CECR5-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CECR5-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for CECR5-AS1
    • Block miRNA regulation of CECR5-AS1 using miScript Target Protectors

    Sources for CECR5-AS1 Gene

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