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Aliases for CECR3 Gene

Subcategory (RNA class) for CECR3 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for CECR3 Gene

  • Cat Eye Syndrome Chromosome Region, Candidate 3 (Non-Protein Coding) 2 3
  • Cat Eye Syndrome Chromosome Region, Candidate 3 2

External Ids for CECR3 Gene

ORGUL Members for CECR3 Gene

Summaries for CECR3 Gene

GeneCards Summary for CECR3 Gene

CECR3 (Cat Eye Syndrome Chromosome Region, Candidate 3 (Non-Protein Coding)) is a RNA Gene, and belongs to lncRNA RNA class. Diseases associated with CECR3 include cat eye syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CECR3 Gene

Genomics for CECR3 Gene

Genomic Location for CECR3 Gene

Start:
17,256,859 bp from pter
End:
17,266,733 bp from pter
Size:
9,875 bases
Orientation:
Minus strand

Genomic View for CECR3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CECR3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CECR3 Gene

No data available for Regulatory Elements for CECR3 Gene

Proteins for CECR3 Gene

Post-translational modifications for CECR3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CECR3 Gene

Domains for CECR3 Gene

Gene Families for CECR3 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with CECR3: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for CECR3 Gene

Function for CECR3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CECR3 Gene

Localization for CECR3 Gene

No data available for Gene Ontology (GO) - Cellular Components for CECR3 Gene

Pathways for CECR3 Gene

SuperPathways for CECR3 Gene

No Data Available

Interacting Proteins for CECR3 Gene

Gene Ontology (GO) - Biological Process for CECR3 Gene

None

No data available for Pathways by source for CECR3 Gene

Transcripts for CECR3 Gene

mRNA/cDNA for CECR3 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CECR3 Gene

No ASD Table

Relevant External Links for CECR3 Gene

GeneLoc Exon Structure for
CECR3
ECgene alternative splicing isoforms for
CECR3

Expression for CECR3 Gene

mRNA expression in normal human tissues for CECR3 Gene

mRNA differential expression in normal tissues according to GTEx for CECR3 Gene

This gene is overexpressed in Testis (7.1), Kidney - Cortex (6.3), Pancreas (5.9), Colon - Transverse (5.0), and Muscle - Skeletal (4.3).

SOURCE GeneReport for Unigene cluster for CECR3 Gene Hs.517394

genes like me logo Genes that share expressions with CECR3: view

Orthologs for CECR3 Gene

Evolution for CECR3 Gene

ENSEMBL:
Gene Tree for CECR3 (if available)
TreeFam:
Gene Tree for CECR3 (if available)

No data available for Orthologs for CECR3 Gene

Paralogs for CECR3 Gene

No data available for Paralogs for CECR3 Gene

Variants for CECR3 Gene

Sequence variations from dbSNP and Humsavar for CECR3 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs758220 -- 17,261,284(-) GGCAG(A/G)CTTCT intron-variant
rs758221 -- 17,260,847(-) TGATT(C/T)CTCCT nc-transcript-variant
rs2401078 -- 17,266,450(+) ACACA(C/T)GGCAC intron-variant
rs2401079 -- 17,266,460(+) CCCCC(A/C)ACCTG intron-variant
rs3804058 -- 17,266,388(-) CCCTT(A/G)GCTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CECR3 Gene

Variant ID Type Subtype PubMed ID
nsv509805 CNV Insertion 20534489

Relevant External Links for CECR3 Gene

HapMap Linkage Disequilibrium report
CECR3

Disorders for CECR3 Gene

(1) MalaCards Diseases for CECR3 Gene

Search for CECR3 Gene in MalaCards »
genes like me logo Genes that share disorders with CECR3: view

No data available for UniProtKB/Swiss-Prot for CECR3 Gene

Publications for CECR3 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz T.K. … McDermid H.E. (Genome Res. 2001) 2 3

Products for CECR3 Gene

Sources for CECR3 Gene

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