CEBPZ Gene
protein-coding GIFtS : 54
GCID: GC02 M037428
CCAAT/enhancer binding protein (C/EBP), zeta
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Aliasesfor CEBPZ gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases CCAAT/Enhancer Binding Protein (C/EBP), Zeta 1 2 NOC12 5 CBF21 2 3 CTF21 CBF2 3 5 HSP-CBF2 CCAAT-Binding Factor2 3 CCAAT/Enhancer Binding Protein Zeta2 CCAAT-Box-Binding Transcription Factor2 3 CCAAT/Enhancer-Binding Protein Zeta2
Export aliases for CEBPZ gene to outside databases Previous GC identifers: GC02M037403 GC02M037340 GC02M037168
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Summariesfor CEBPZ gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: CEBPZ_HUMAN, Q03701 Function : Stimulates transcription from the HSP70 promoterGene Wiki entry for CEBPZ (CCAAT/enhancer binding protein zeta)
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Genomic Viewsfor CEBPZ gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_022184.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CEBPZ gene promoter: Oct-B1 p53 CUTL1 FOXO3b HNF-1A Evi-1 AREB6 POU2F1 HNF-1 POU2F1a Other transcription factors Search SABiosciences Chromatin IP Primers for CEBPZ Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CEBPZ
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2p22.2 Ensembl cytogenetic band: 2p22.2 HGNC cytogenetic band: 2p22.3 CEBPZ Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M037428: view genomic region
(about GC identifiers )
Start:
37,428,755 bp from pter
End:
37,458,856 bp from pter
Size:
30,102 bases
Orientation:
minus strand
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Proteinsfor CEBPZ gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CEBPZ_HUMAN, Q03701 (See
protein sequence )Recommended Name: CCAAT/enhancer-binding protein zeta Size : 1054 amino acids; 120974 Da
Subcellular location : Nucleus
Sequence caution : Sequence=AAA51924.1; Type=Frameshift; Positions=998;
Secondary accessions : Q8NE75Explore the universe of human proteins at neXtProt for CEBPZ: NX_Q03701 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q03701 CEBPZ Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins: NP_005751.2 ENSEMBL proteins: ENSP00000234170 ENSP00000391881 Human Recombinant Protein Products for CEBPZ: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005634 nucleus
IEA --
CEBPZ for ontologies About GeneDecksing CEBPZ Antibody Products: Assay Products for CEBPZ:
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Protein
Domains / Familiesfor CEBPZ gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CEBPZ for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q03701 ProtoNet protein and cluster: Q03701
1 Blocks protein family : IPB005612 CBF/Mak21 family UniProtKB/Swiss-Prot: CEBPZ_HUMAN, Q03701 Similarity : Belongs to the CBF/MAK21 family
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Functionfor CEBPZ gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: CEBPZ_HUMAN, Q03701 Function : Stimulates transcription from the HSP70 promoter
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
CEBPZ for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for CEBPZ :Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZ (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CEBPZ (NM_005760 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CEBPZ Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CEBPZ
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CEBPZ
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Pathways & Interactionsfor CEBPZ gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Direct p53 effectors
1 BioSystems Pathway for CEBPZ Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CEBPZ STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/150 Interacting proteins for CEBPZ (Q03701 2 , 3 ENSP00000234170 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 150 )About this table Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006355 regulation of transcription, DNA-dependent
IEA -- GO:0006366 transcription from RNA polymerase II promoter
TAS 2247079
CEBPZ for ontologies About GeneDecksing
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Drugs & Compoundsfor CEBPZ gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CEBPZ for compounds About GeneDecksing Browse Tocris compounds for CEBPZ 4 Novoseek chemical compound relationships for CEBPZ gene About this table
Search CenterWatch for drugs/clinical trials and news about CEBPZ
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Transcriptsfor CEBPZ gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CEBPZ gene: NM_005760.2 Unigene Cluster for CEBPZ:
CCAAT/enhancer binding protein (C/EBP), zeta Hs.135406 [show with all ESTs ] Unigene Representative Sequence: AK125997 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000234170 (uc002rpz.3 ) ENST00000489306 ENST00000446769 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZ (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CEBPZ (NM_005760 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CEBPZ Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CEBPZ
Additional cDNA sequence: AK125997.1 AK312322.1 BC034475.2 M37197.1
21 DOTS entries : DT.100659718 DT.454714
DT.121001602 DT.121001617 DT.101963050 DT.95154390 DT.100753970 DT.121001639 DT.305076 DT.91707089 DT.92033793 DT.95351154 DT.100640447 DT.100750952 DT.100852433 DT.100862091 DT.121088715 DT.424337 DT.92033435 DT.95298431 DT.99974102 24/170 AceView cDNA sequences (see all 170 ):
AI277976 NM_005760 BG112903 BM451841 CB149339 BG251050 BM972414 BM674912 AW043757 CD677164 BU184301 BC034475 BM982595 AV713322 BI087674 AA927754 T27947 BU507120 BF222686 BG719333 AU129715 AA704979 BV207495 BG941330 GeneLoc Exon Structure
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Expression for CEBPZ gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CEBPZ expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TTTTTTGATCAbout this image CEBPZ expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See CEBPZ Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CEBPZ SOURCE GeneReport for Unigene cluster: Hs.135406 SABiosciences Custom PCR Arrays for CEBPZ Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CEBPZBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CEBPZ QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CEBPZ QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CEBPZ In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CEBPZ
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Orthologsfor CEBPZ gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for CEBPZ gene from 10/34 species (see all 34 ) About this table
ENSEMBL Gene Tree for CEBPZ (if available)TreeFam Gene Tree for CEBPZ (if available)
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Paralogsfor CEBPZ gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor CEBPZ gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CEBPZ (37428755 - 37458856 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CEBPZ: --
SABiosciences Cancer Mutation PCR Assays
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Disorders
/ Diseasesfor CEBPZ gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CEBPZ for disorders About GeneDecksing
OMIM gene information: 612828
OMIM disorders : --17 diseases for CEBPZ : About MalaCards normal pressure hydrocephalus myxoid liposarcoma myeloid leukemia chronic myeloid leukemia acute myeloid leukemia burkitt's lymphoma cystic fibrosis hydrocephalus liposarcoma hepatitis b scleroderma fibrosis leukemia twinning hepatitis neuroblastoma retinitis 1 disease from the University of Copenhagen DISEASES database for CEBPZ :Normal pressure hydrocephalus 4 Novoseek disease relationships for CEBPZ gene About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
sclerosis systemic
18.6
1
12881530 (1)
shock
0
2
14500791 (1)
colorectal cancer
0
1
11888892 (1)
tumors
0
1
8874213 (1)
Export disorders for CEBPZ gene to outside databases
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Publicationsfor CEBPZ gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CEBPZ gene, integrated from 9 sources (see all 104 ): (articles sorted by number of sources associating them with CEBPZ) Utopia : connect your pdf to the dynamic world of online information
A cloned human CCAAT-box-binding factor stimulates transcription from the human hsp70 promoter. (PubMed id 2247079) 1 , 2 , 3, 9 Lum L.... Wu B. (1990) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 1 , 2 Olsen J.V....Mann M. (2006) Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621) 1 , 2 Hillier L.W....Wilson R.K. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Physical interaction of tumour suppressor p53/p73 wit h CCAAT-binding transcription factor 2 (CTF2) and differential regulation of hu man high-mobility group 1 (HMG1) gene expression. (PubMed id 12534345) 1 , 3 Uramoto H....Kohno K. (2003) Cloning and characterization of mouse CCAAT binding factor. (PubMed id 8604343) 1 , 9 Hoeppner M.A....Wu B. (1996) The p65 subunit of NF-I_B inhibits COL1A1 gene transcr iption in human dermal and scleroderma fibroblasts through its recruitment on p romoter by protein interaction with transcriptional activators (c-Krox, Sp1, an d Sp3). (PubMed id 22139845) 1 Beauchef G....Galera P. (2012) Functional proteomics establishes the interaction of S IRT7 with chromatin remodeling complexes and expands its role in regulation of R NA polymerase I transcription. (PubMed id 22586326) 1 Tsai Y.C....Cristea I.M. (2012) Aberrant methylation of CCAAT/enhancer binding protei n zeta promoter in acute myeloid leukemia. (PubMed id 21106240) 1 Yao D.M....Yang J. (2011) A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473) 1 Wagner S.A....Choudhary C. (2011)
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External Searches for CEBPZ gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CEBPZ gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing CEBPZ gene
(According to HUGE )
About This Section --
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Specialized Databases showing CEBPZ gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for CEBPZ Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for CEBPZ gene: Search GeneIP for patents involving CEBPZ GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CEBPZ gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for CEBPZ OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CEBPZ OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CEBPZ Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CEBPZ OriGene 3'-UTR Clone for CEBPZ OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZ OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CEBPZ Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CEBPZ OriGene Custom Protein Services for CEBPZ OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CEBPZ Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CEBPZ QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CEBPZ QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CEBPZ QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CEBPZ QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CEBPZ
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Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CEBPZ
ThermoFisher Antibodies for CEBPZ
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CEBPZ
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Aliases for CEBPZ
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Disorders / Diseases for CEBPZ
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Drugs / Compounds for CEBPZ
Expression for CEBPZ
Function for CEBPZ
Genomic Views for CEBPZ
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Pathways / Interactions for CEBPZ
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