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Aliases for CEBPZ Gene

Aliases for CEBPZ Gene

  • CCAAT/Enhancer Binding Protein Zeta 2 3 5
  • CCAAT/Enhancer Binding Protein (C/EBP), Zeta 2 3
  • CCAAT-Box-Binding Transcription Factor 3 4
  • CBF2 3 4
  • CBF 3 4
  • CCAAT/Enhancer Binding Proteincebp* Family Zeta 2
  • CCAAT/Enhancer Binding Protein Cebp Family Zeta 3
  • CCAAT/Enhancer-Binding Protein Zeta 3
  • CCAAT-Binding Factor 4
  • HSP-CBF 3
  • NOC1 3

External Ids for CEBPZ Gene

Previous GeneCards Identifiers for CEBPZ Gene

  • GC02M037403
  • GC02M037340
  • GC02M037428
  • GC02M037168

Summaries for CEBPZ Gene

Entrez Gene Summary for CEBPZ Gene

  • This gene belongs to the CEBP family. The encoded protein plays a role in cellular response to environmental stimuli through a transcriptional process that involves heat shock factors, conserved DNA elements (heat shock elements or HSEs) and CCAAT boxes. The protein acts as a DNA-binding transcriptional activator and regulates the heat-shock protein 70 (HSP70) promoter in a CCAAT-dependent manner. The protein is also involved in cell growth and differentiation, particularly, hematopoietic differentiation. Methylation of the promoter of this gene or mutations within the gene may be correlated with occurance of acute myeloid leukemia (AML). [provided by RefSeq, Jun 2016]

GeneCards Summary for CEBPZ Gene

CEBPZ (CCAAT/Enhancer Binding Protein Zeta) is a Protein Coding gene. Among its related pathways are Mesodermal Commitment Pathway and Gastric Cancer Network 2. GO annotations related to this gene include poly(A) RNA binding and RNA polymerase II core promoter proximal region sequence-specific DNA binding.

UniProtKB/Swiss-Prot for CEBPZ Gene

  • Stimulates transcription from the HSP70 promoter.

Gene Wiki entry for CEBPZ Gene

Additional gene information for CEBPZ Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CEBPZ Gene

Genomics for CEBPZ Gene

Regulatory Elements for CEBPZ Gene

Enhancers for CEBPZ Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H037560 1.9 FANTOM5 Ensembl ENCODE dbSUPER 23.9 -330.4 -330379 3 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ATF7 FOS CAVIN1 NCOA1 ENSG00000272054 CEBPZ CDC42EP3 HEATR5B LOC105374464 EIF2AK2 GC02M037562
GH02H037195 1.3 ENCODE dbSUPER 20.6 +33.3 33324 5 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 PAF1 SP3 CEBPZOS CEBPZ NDUFAF7 EIF2AK2 SULT6B1 ENSG00000272054
GH02H037322 1.3 ENCODE dbSUPER 17.7 -93.5 -93454 4 PKNOX1 ATF1 FOXA2 ZFP64 ARID4B SIN3A ZNF2 YY1 GLIS2 ZNF143 CEBPZ PRKD3 NDUFAF7 CEBPZOS LOC101929542 GC02M037332 RNU6-939P
GH02H038070 1.5 Ensembl ENCODE dbSUPER 11.6 -842.5 -842510 7 FOXA2 PKNOX1 ARNT SIN3A YY1 GLIS2 ZNF143 FOS KLF7 RUNX3 ENSG00000272054 SRSF7 DHX57 ASS1P2 CYP1B1 CEBPZ HEATR5B RMDN2 CYP1B1-AS1
GH02H036378 1.5 Ensembl ENCODE dbSUPER 11.6 +850.8 850808 3 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 TCF12 SLC30A9 RUNX3 ZNF202 ENSG00000272054 CEBPZ HEATR5B LOC100288911 GC02P036388 CRIM1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CEBPZ on UCSC Golden Path with GeneCards custom track

Promoters for CEBPZ Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000115327 513 2401 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 DEK SP3

Genomic Location for CEBPZ Gene

Chromosome:
2
Start:
37,201,612 bp from pter
End:
37,231,713 bp from pter
Size:
30,102 bases
Orientation:
Minus strand

Genomic View for CEBPZ Gene

Genes around CEBPZ on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CEBPZ Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CEBPZ Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CEBPZ Gene

Proteins for CEBPZ Gene

  • Protein details for CEBPZ Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q03701-CEBPZ_HUMAN
    Recommended name:
    CCAAT/enhancer-binding protein zeta
    Protein Accession:
    Q03701
    Secondary Accessions:
    • Q8NE75

    Protein attributes for CEBPZ Gene

    Size:
    1054 amino acids
    Molecular mass:
    120974 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAA51924.1; Type=Frameshift; Positions=998; Evidence={ECO:0000305};

neXtProt entry for CEBPZ Gene

Post-translational modifications for CEBPZ Gene

  • Ubiquitination at Lys314
  • Modification sites at PhosphoSitePlus

Other Protein References for CEBPZ Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CEBPZ Gene

Domains & Families for CEBPZ Gene

Gene Families for CEBPZ Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CEBPZ Gene

Suggested Antigen Peptide Sequences for CEBPZ Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q03701

UniProtKB/Swiss-Prot:

CEBPZ_HUMAN :
  • Belongs to the CBF/MAK21 family.
Family:
  • Belongs to the CBF/MAK21 family.
genes like me logo Genes that share domains with CEBPZ: view

Function for CEBPZ Gene

Molecular function for CEBPZ Gene

UniProtKB/Swiss-Prot Function:
Stimulates transcription from the HSP70 promoter.

Gene Ontology (GO) - Molecular Function for CEBPZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IDA 2247079
GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding IDA 2247079
GO:0003677 DNA binding TAS 2247079
GO:0003723 RNA binding IDA 22658674
GO:0005515 protein binding IPI 12534345
genes like me logo Genes that share ontologies with CEBPZ: view
genes like me logo Genes that share phenotypes with CEBPZ: view

Animal Model Products

CRISPR Products

miRNA for CEBPZ Gene

miRTarBase miRNAs that target CEBPZ

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CEBPZ
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CEBPZ Gene

Localization for CEBPZ Gene

Subcellular locations from UniProtKB/Swiss-Prot for CEBPZ Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CEBPZ gene
Compartment Confidence
nucleus 5
plasma membrane 2
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nucleus (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for CEBPZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA,TAS --
genes like me logo Genes that share ontologies with CEBPZ: view

Pathways & Interactions for CEBPZ Gene

genes like me logo Genes that share pathways with CEBPZ: view

Pathways by source for CEBPZ Gene

Gene Ontology (GO) - Biological Process for CEBPZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006366 transcription from RNA polymerase II promoter TAS 2247079
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IDA 2247079
genes like me logo Genes that share ontologies with CEBPZ: view

No data available for SIGNOR curated interactions for CEBPZ Gene

Drugs & Compounds for CEBPZ Gene

(1) Drugs for CEBPZ Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(3) Additional Compounds for CEBPZ Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with CEBPZ: view

Transcripts for CEBPZ Gene

mRNA/cDNA for CEBPZ Gene

Unigene Clusters for CEBPZ Gene

CCAAT/enhancer binding protein (C/EBP), zeta:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for CEBPZ
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for CEBPZ Gene

No ASD Table

Relevant External Links for CEBPZ Gene

GeneLoc Exon Structure for
CEBPZ
ECgene alternative splicing isoforms for
CEBPZ

Expression for CEBPZ Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CEBPZ Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for CEBPZ Gene

This gene is overexpressed in Testis (10.4), CD8 Tcells (7.8), Fetal testis (7.3), Fetal ovary (6.7), and Peripheral blood mononuclear cells (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for CEBPZ Gene



Protein tissue co-expression partners for CEBPZ Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CEBPZ Gene:

CEBPZ

SOURCE GeneReport for Unigene cluster for CEBPZ Gene:

Hs.135406

Evidence on tissue expression from TISSUES for CEBPZ Gene

  • Liver(4.3)
  • Nervous system(3.5)
  • Blood(2.2)
genes like me logo Genes that share expression patterns with CEBPZ: view

Primer Products

No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for CEBPZ Gene

Orthologs for CEBPZ Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CEBPZ Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CEBPZ 33 34
  • 99.37 (n)
dog
(Canis familiaris)
Mammalia CEBPZ 33 34
  • 89.95 (n)
cow
(Bos Taurus)
Mammalia CEBPZ 33 34
  • 87.85 (n)
mouse
(Mus musculus)
Mammalia Cebpz 33 16 34
  • 83.09 (n)
rat
(Rattus norvegicus)
Mammalia Cebpz 33
  • 82.15 (n)
oppossum
(Monodelphis domestica)
Mammalia CEBPZ 34
  • 72 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CEBPZ 34
  • 65 (a)
OneToOne
chicken
(Gallus gallus)
Aves CEBPZ 33 34
  • 68.87 (n)
lizard
(Anolis carolinensis)
Reptilia CEBPZ 34
  • 64 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia cebpz 33
  • 65.23 (n)
Str.7416 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.10705 33
zebrafish
(Danio rerio)
Actinopterygii cebpz 33 34
  • 62.24 (n)
wufi26d06 33
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.6779 33
fruit fly
(Drosophila melanogaster)
Insecta CG7839 34
  • 25 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea CELE_F23B12.7 33
  • 47.32 (n)
F23B12.7 34
  • 30 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes MAK21 33 34 36
  • 48.93 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E12519g 33
  • 46.81 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AER174W 33
  • 41.3 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC4F10.09c 33
  • 50.24 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU09894 33
  • 46.02 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 30 (a)
OneToOne
Species where no ortholog for CEBPZ was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for CEBPZ Gene

ENSEMBL:
Gene Tree for CEBPZ (if available)
TreeFam:
Gene Tree for CEBPZ (if available)

Paralogs for CEBPZ Gene

No data available for Paralogs for CEBPZ Gene

Variants for CEBPZ Gene

Sequence variations from dbSNP and Humsavar for CEBPZ Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs756442818 Likely benign 37,231,724(+) TGAGG(A/T)CAGGT nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs386352290 Uncertain significance 37,228,554(-) CTGTA(G/T)CAGCA reference, stop-gained
rs73927405 Uncertain significance 37,231,728(+) GTCAG(A/G)TTTGG nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs764894035 Uncertain significance 37,231,706(+) TCAGC(A/G)TGAGT nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs145277736 Benign 37,231,669(+) GCCCC(-/A)GCTCC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for CEBPZ Gene

Variant ID Type Subtype PubMed ID
nsv2684 CNV insertion 18451855

Variation tolerance for CEBPZ Gene

Residual Variation Intolerance Score: 36.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.39; 77.06% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CEBPZ Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CEBPZ

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CEBPZ Gene

Disorders for CEBPZ Gene

Relevant External Links for CEBPZ

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CEBPZ

No disorders were found for CEBPZ Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CEBPZ Gene

Publications for CEBPZ Gene

  1. A cloned human CCAAT-box-binding factor stimulates transcription from the human hsp70 promoter. (PMID: 2247079) Lum LS … Wu BJ (Molecular and cellular biology 1990) 2 3 4 22 60
  2. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen JV … Mann M (Cell 2006) 3 4 60
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 3 4 60
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  5. Physical interaction of tumour suppressor p53/p73 with CCAAT-binding transcription factor 2 (CTF2) and differential regulation of human high-mobility group 1 (HMG1) gene expression. (PMID: 12534345) Uramoto H … Kohno K (The Biochemical journal 2003) 2 3 60

Products for CEBPZ Gene

Sources for CEBPZ Gene

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