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Aliases & Descriptions for CEACAM5
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CD66e 1, 2 | | CEA 2, 3, 5 | | DKFZp781M2392 2 |
| | | Descriptions |
|---|
| CD66e antigen 3 | | Carcinoembryonic antigen 3 | | Meconium antigen 100 3 | | carcinoembryonic antigen-related cell adhesion molecule 5 2 |
|
| | Search outside databases for aliases for CEACAM5 genePrevious GC identifers: GC19P042852 GC19P042604 GC19P046888 |
Summaries for CEACAM5(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: CEAM5_HUMAN, P06731Function: Cell surface glycoprotein that plays a role in cell adhesion and in intracellular signaling. Receptor for E.coli Dr adhesinsGene Wiki entry for CEACAM5 |
Genomic Location for CEACAM5
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CEACAM5 gene 
Entrez Gene cytogenetic band: 19q13.1-q13.2 Ensembl cytogenetic band: 19q13.2 HGNC cytogenetic band: 19q13.1-q13.2CEACAM5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19P046904:
(about GC identifiers)
Start:
|
46,904,370 bp from pter |
End:
|
46,926,277 bp from pter |
Size:
|
21,908 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000019.8 NT_011109.15
| Proteins for CEACAM5
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CEAM5_HUMAN, P06731 (See
protein sequence)Recommended Name: Carcinoembryonic antigen-related cell adhesion molecule 5 precursor Size: 702 amino acids; 76796 Da
Subunit: Homodimer. Binding of E.coli Dr adhesins leads to dissociation of the homodimer
Subcellular location: Cell membrane; Lipid-anchor, GPI-anchor
PDB structures from and Proteopedia :1E07 (3D)
 2QSQ (3D)
 2QST (3D)
 2VER (3D)
 Post-translational modifications:
Complex immunoreactive glycoprotein with a MW of 180 kDa comprising 60% carbohydrate1
REFSEQ proteins: NP_004354.2
ENSEMBL proteins: ENSP00000367423 ENSP00000221992 ENSP00000385072
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CEACAM5: Assays for CEACAM5: | Protein
Domains/ Families for CEACAM5(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P06731
ProtoNet protein and cluster: P06731 2 Blocks protein families: IPB003598 Immunoglobulin C-2 type IPB013106 Immunoglobulin V-set
UniProtKB/Swiss-Prot: CEAM5_HUMAN, P06731Similarity: Belongs to the immunoglobulin superfamily. CEA familySimilarity: Contains 7 Ig-like (immunoglobulin-like) domains | Gene Function for CEACAM5
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004363
Applied Biosystems Silencer® siRNAs for CEACAM5
Sigma-Aldrich siRNA and siRNA Panels for CEACAM5  Sigma-Aldrich shRNA Panels and shRNA for CEACAM5  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004363                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004363                                  untagged cDNA clone in CMV expression vector: NM_004363 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004363
UniProtKB/Swiss-Prot: CEAM5_HUMAN, P06731Function: Cell surface glycoprotein that plays a role in cell adhesion and in intracellular signaling. Receptor for E.coli Dr adhesinsGenatlas biochemistry entry for CEACAM5:carcinoembryonic antigen-related cell adhesion molecule 5 | Pathways & Interactions for CEACAM5
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for CEACAM5 
5/8 Interacting proteins for CEACAM5 (P067312 ENSP000002219923) via UniProtKB, MINT, and/or STRING (see all 8
)About this table
|
Drugs & Compounds for CEACAM5(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CEACAM5 10/34 Novoseek chemical compound relationships for CEACAM5 gene (see all 34
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| labetuzumab |
81.00 |
3 |
15592930 (2), 15809485 (1) |
| b 723 |
64.01 |
20 |
8941003 (4), 10431845 (4), 7868083 (3), 1689123 (2) (see all 8) |
| slex |
50.63 |
19 |
17697728 (4), 11125284 (2), 11291879 (2), 12017332 (2) (see all 6) |
| mucicarmine |
49.47 |
1 |
10199475 (1) |
| polynucleotide |
40.93 |
9 |
7712333 (4), 9053029 (1), 7621253 (1), 8118800 (1) |
| crcs |
38.43 |
3 |
1962152 (2), 15221959 (1) |
| hematoxylin |
16.98 |
5 |
17101257 (1), 16425381 (1), 19189191 (1), 10199475 (1) |
| cytosine |
11.06 |
3 |
11507067 (1), 10608354 (1), 19118047 (1) |
| gold |
4.79 |
4 |
17002090 (1) |
| steroid |
4.47 |
5 |
7684339 (2), 10427956 (1), 11553856 (1), 8070597 (1) |
About this table
|
Transcripts for CEACAM5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004363
Sigma-Aldrich siRNA and siRNA Panels for CEACAM5  Sigma-Aldrich shRNA Panels and shRNA for CEACAM5  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004363 REFSEQ mRNAs for CEACAM5 gene: NM_004363.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004363               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004363                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004363                                  untagged cDNA clone in CMV expression vector: NM_004363  Additional cDNA sequence: AK223101.1 AK310844.1 BC034671.1 CR749337.1 M15042.1 M16234.1 M17191.1 M29540.1 X16455.1 24/30 DOTS entries (see all 30
): DT.100822611 DT.420280 DT.121426886 DT.95290266 DT.92439265 DT.86845447 DT.95214825 DT.95301065 DT.91682705 DT.121426861 DT.121426895 DT.95289952 DT.121426853 DT.95311400 DT.121426870 DT.121426903 DT.95286776 DT.95338629 DT.98131717 DT.98131718 DT.100035515 DT.40117512 DT.87017412 DT.87017415 24/574 AceView cDNA sequences (see all 574
):AW859600 BM828560 AA053595 AI940526 AI634287 AL702861 AW819835 BM751729 AW071196 AA055606 BM751377 AL602851 BM786353 BI012906 AW008952 M16234 AA132368 AI813806 AI582940 X16455 BQ319765 BM770005 BM836104 BX279781
highest scoring ESTs for CEACAM5:AA053080 AA055606 AA126970 AA130584 AA132368 AA132490 AA132688 AA133927 AA134894 AA134921 Unigene Cluster for CEACAM5: Carcinoembryonic antigen-related cell adhesion molecule 5 Hs.709196 [show with all ESTs]Unigene Representative Sequence: NM_004363
GeneLoc Exon Structure
5/9 Alternative Splicing Database (ASD) splice patterns (SP) for CEACAM5 (see all 9
)
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9a | · | 9b | ^ | 10a | · | 10b | ^ | 11a | · | 11b | ^ | 12a | · | 12b | · | 12c | · | 12d | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CEACAM5
3 Ensembl transcripts including schematic representations: ENST00000378181
ENST00000221992
ENST00000405816
|
Expression for CEACAM5
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CEACAM5 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CEACAM5
1 / 2 / 3 7 probe-sets matching CEACAM5 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.709196
Expression variation in blood from EXPOLDB for CEACAM5 UniProtKB/Swiss-Prot: CEAM5_HUMAN, P06731Tissue specificity: Found in adenocarcinomas of endodermally derived digestive system epithelium and fetal colon |
Orthologs for CEACAM5
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CEACAM5 gene from 1 species
| Organism |
Gene |
Locus |
Description |
Human Similarity |
NCBI accessions |
zebrafish (Danio rerio) |
ceacam11 |
-- |
carcinoembryonic antigen-related cell adhesion molecule more |
42.78(n) 30.17(a) |
114465 NM_001113794.1 NP_001107266.1 |
About this table Species with no ortholog for CEACAM5
ENSEMBL Gene Tree for CEACAM5 | Paralogs for CEACAM5(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CEACAM5 gene
- CEACAM61 2 CEACAM11 2 PSG52 PSG92 PSG82 PSG62 PSG112 CEACAM82
- CEACAM72 PSG32 PSG22 PSG72 PSG12
|
SNPs/Variants for CEACAM5(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CEACAM5 (up to first 250kb)
|
Disorders & Mutations for CEACAM5
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 114890
10/96 Novoseek disease relationships for CEACAM5 gene (see all 96
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| colorectal cancer |
82.56 |
266 |
1293545 (7), 11898807 (5), 11289125 (5), 10770562 (4) (see all 99) |
| metastasis |
79.99 |
407 |
11948229 (5), 14592671 (5), 10770562 (4), 16719189 (4) (see all 99) |
| colorectal carcinoma |
79.82 |
95 |
8439497 (4), 12854170 (4), 11948229 (4), 10211983 (3) (see all 53) |
| adenocarcinoma |
77.18 |
148 |
15082298 (5), 2328062 (4), 15337038 (4), 12521132 (3) (see all 91) |
| tumors |
75.54 |
669 |
14981971 (6), 1290028 (6), 7914825 (5), 10858386 (5) (see all 99) |
| gastric cancer |
71.63 |
126 |
8908563 (5), 8908719 (4), 1327687 (4), 9660027 (4) (see all 64) |
| nsclc |
69.72 |
115 |
10808698 (5), 15363304 (5), 16809939 (4), 18646695 (4) (see all 51) |
| colon carcinoma |
68.09 |
32 |
1477074 (2), 7688074 (2), 18375392 (2), 15510175 (2) (see all 20) |
| colon cancer |
65.31 |
57 |
11964079 (4), 8141873 (3), 2314825 (3), 12636102 (3) (see all 29) |
| cancer |
64.99 |
204 |
15017899 (9), 10601548 (4), 16223370 (3), 9704713 (3) (see all 99) |
About this table
|
Medical News for CEACAM5(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CEACAM5 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/939 PubMed articles for CEACAM5 gene (see all 939
):- Identification of N-linked glycoproteins in human saliva by glycoprotein capture and mass spectrometry. (PubMed id 16740002)3, 4 Ramachandran P....Loo J.A. (2006)
- Structural models for carcinoembryonic antigen and its complex with the single-chain Fv antibody molecule MFE23. (PubMed id 10854848)3, 4 Boehm M.K. and Perkins S.J. (2000)
- Cloning of the complete gene for carcinoembryonic antigen: analysis of its promoter indicates a region conveying cell type-specific expression. (PubMed id 2342461)3, 4 Schrewe H.... Zimmermann W. (1990)
- Carcinoembryonic antigen family: characterization of cDNAs coding for NCA and CEA and suggestion of nonrandom sequence variation in their conserved loop-domains. (PubMed id 3220478)3, 4 Barnett T.... Elting J.J. (1988)
- Isolation and characterization of cDNA clones encoding the human carcinoembryonic antigen reveal a highly conserved repeating structure. (PubMed id 3033671)3, 4 Zimmermann W.... von Kleist S. (1987)
- Isolation and characterization of full-length functional cDNA clones for human carcinoembryonic antigen. (PubMed id 3670312)3, 4 Beauchemin N.... Stanners C.P. (1987)
- Primary structure of human carcinoembryonic antigen (CEA) deduced from cDNA sequence. (PubMed id 3814146)3, 4 Oikawa S.... Kosaki G. (1987)
- Inhibition of endogenous carcinoembryonic antigen (CEA) increases the apoptotic rate of colon cancer cells and inhibits metastatic tumor growth. (PubMed id 11964079)1, 3 Wirth T....Juhl H. (2002)
- Carcinoembryonic antigen messenger RNA expression in blood can predict relapse in gastric cancer. (PubMed id 17936797)1, 3 Ishigami S....Aikou T. (2008)
- CEACAM5 and CEACAM6 are major target genes for Smad3-mediated TGF-beta signaling. (PubMed id 17653079)1, 3 Han S.U....Kim S.J. (2008)
|
Search for CEACAM5
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CEACAM5
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CEACAM5
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CEACAM5(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CEACAM5(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CEACAM5:

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Incremental update: 13 Oct 2009
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