Free for academic non-profit institutions. Other users need a Commercial license

CDRT8 Gene(RNA Gene)

CMT1A Duplicated Region Transcript 8

GCID:
GC17M015104
GIFtS:
13
Genes Participants
UDN Logo

Aliases for CDRT8 Gene

Subcategory (RNA class) for CDRT8 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CDRT8 Gene

  • CMT1A Duplicated Region Transcript 8 2 3 5

External Ids for CDRT8 Gene

Previous GeneCards Identifiers for CDRT8 Gene

  • GC17U990292
  • GC17M015009

Summaries for CDRT8 Gene

GeneCards Summary for CDRT8 Gene

CDRT8 (CMT1A Duplicated Region Transcript 8) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT8 Gene

Genomics for CDRT8 Gene

Products:

  1. Regulatory Element

Regulatory Elements for CDRT8 Gene

Enhancers for CDRT8 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around CDRT8 on UCSC Golden Path with GeneCards custom track

Genomic Location for CDRT8 Gene

Chromosome:
17
Start:
15,104,985 bp from pter
End:
15,106,187 bp from pter
Size:
1,203 bases
Orientation:
Minus strand

Genomic View for CDRT8 Gene

Genes around CDRT8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CDRT8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CDRT8 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CDRT8 Gene

Proteins for CDRT8 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CDRT8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDRT8 Gene

Domains & Families for CDRT8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDRT8 Gene

Function for CDRT8 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDRT8 Gene

Localization for CDRT8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CDRT8 Gene

Pathways & Interactions for CDRT8 Gene

SuperPathways for CDRT8 Gene

PathCards logoMore details on SuperPathways for CDRT8
No Data Available

Interacting Proteins for CDRT8 Gene

Gene Ontology (GO) - Biological Process for CDRT8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CDRT8 Gene

Drugs & Compounds for CDRT8 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CDRT8 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for CDRT8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CDRT8 Gene

No ASD Table

Relevant External Links for CDRT8 Gene

GeneLoc Exon Structure for
CDRT8
ECgene alternative splicing isoforms for
CDRT8

Expression for CDRT8 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for CDRT8 Gene

mRNA expression in normal human tissues for CDRT8 Gene
mRNA expression by GTEx for CDRT8 Gene

mRNA differential expression in normal tissues according to GTEx for CDRT8 Gene

This gene is overexpressed in Testis (x41.3).
genes like me logo Genes that share expression patterns with CDRT8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for CDRT8 Gene

Orthologs for CDRT8 Gene

Evolution for CDRT8 Gene

ENSEMBL:
Gene Tree for CDRT8 (if available)
TreeFam:
Gene Tree for CDRT8 (if available)

No data available for Orthologs for CDRT8 Gene

Paralogs for CDRT8 Gene

No data available for Paralogs for CDRT8 Gene

Variants for CDRT8 Gene

Sequence variations from dbSNP and Humsavar for CDRT8 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs971162 -- 15,105,964(+) tcagt(G/T)caagc intron-variant
rs8068817 -- 15,105,489(+) TACAA(C/T)GTACC nc-transcript-variant
rs8071619 -- 15,105,715(+) TTGCC(A/T)CTGGT intron-variant
rs8066891 -- 15,105,113(+) ACACT(A/G)TCAAG nc-transcript-variant
rs8073242 -- 15,107,851(+) gtact(C/T)gggag upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for CDRT8 Gene

Disorders for CDRT8 Gene

Relevant External Links for CDRT8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CDRT8

No disorders were found for CDRT8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDRT8 Gene

Publications for CDRT8 Gene

  1. The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. (PMID: 11381029) Inoue K. … Birren B. (Genome Res. 2001) 2 3 67

Products for CDRT8 Gene

Sources for CDRT8 Gene

Content