Aliases for CDRT8 Gene
Subcategory (RNA class) for CDRT8 Gene
non-coding RNA
Quality Score for this RNA gene is
3
External Ids for CDRT8 Gene
- HGNC: 14387
- Entrez Gene: 94151
- Ensembl: ENSG00000265163
Previous GeneCards Identifiers for CDRT8 Gene
- GC17U990292
- GC17M015009
Summaries for CDRT8 Gene
GeneCards Summary for CDRT8 Gene
CDRT8 (CMT1A Duplicated Region Transcript 8) is an RNA Gene, and is affiliated with the non-coding RNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT8 Gene
Genomics for CDRT8 Gene
GeneHancer (GH) Regulatory Elements for CDRT8 Gene
Promoters and enhancers for CDRT8 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17I015038 | Enhancer | 0.3 | ENCODE | 6.1 | +67.2 | 67208 | 0.2 | FOS | CDRT8 GC17P015032 GC17P015048 LOC101928475 | |
| GH17I015039 | Enhancer | 0.2 | ENCODE | 6.6 | +66.6 | 66579 | 0.4 | CDRT8 GC17P015032 GC17P015048 LOC101928475 | ||
| GH17I015123 | Enhancer | 0.3 | ENCODE | 0.4 | -17.7 | -17737 | 1.8 | MNT | RNU6-799P TEKT3 CDRT8 GC17P015164 | |
| GH17I015121 | Enhancer | 0.2 | ENCODE | 0.4 | -15.5 | -15452 | 0.2 | CDRT8 GC17P015164 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around CDRT8 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for CDRT8 Gene
Genomic Locations for CDRT8 Gene
- chr17:15,104,985-15,106,187
- (GRCh38/hg38)
- Size:
- 1,203 bases
- Orientation:
- Minus strand
- chr17:15,008,554-15,009,504
- (GRCh37/hg19)
Genomic View for CDRT8 Gene
Genes around CDRT8 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17p12 by Ensembl
- 17p12 by Entrez Gene
- 17p12 by HGNC
CDRT8 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CDRT8 Gene
Proteins for CDRT8 Gene
Post-translational modifications for CDRT8 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CDRT8
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CDRT8
- Origene Custom Protein Services for CDRT8
- Search GeneTex for Proteins for CDRT8
No data available for DME Specific Peptides for CDRT8 Gene
Domains & Families for CDRT8 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDRT8 Gene
Function for CDRT8 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CDRT8
-
- Search ViGene Biosciences for CDRT8
CRISPR Products
- Browse CRISPR knockouts for CDRT8
- Applied Biological Materials CRISPR for CDRT8
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for CDRT8
Inhibitory RNA Products
- Search ViGene Biosciences for CDRT8
Clone Products
- GenScript: Custom all cDNA clones Services for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for CDRT8
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDRT8 Gene
Localization for CDRT8 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CDRT8 Gene
Transcripts for CDRT8 Gene
mRNA/cDNA for CDRT8 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CDRT8
- Applied Biological Materials CRISPR for CDRT8
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for CDRT8
Inhibitory RNA Products
- Search ViGene Biosciences for CDRT8
Clone Products
- GenScript: Custom all cDNA clones Services for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for CDRT8
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for CDRT8 Gene
mRNA differential expression in normal tissues according to GTEx for CDRT8 Gene
This gene is overexpressed in Testis (x41.3).
NURSA nuclear receptor signaling pathways regulating expression of CDRT8 Gene:
CDRT8
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CDRT8 Gene
Orthologs for CDRT8 Gene
No data available for Orthologs for CDRT8 Gene
Paralogs for CDRT8 Gene
No data available for Paralogs for CDRT8 Gene
Variants for CDRT8 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000291148 | -- | 15,105,445(-) | C/A | non_coding_transcript_variant | |
| rs1000948708 | -- | 15,105,654(-) | A/C | intron_variant | |
| rs1003951140 | -- | 15,104,975(-) | T/A | downstream_transcript_variant | |
| rs1004062388 | -- | 15,104,722(-) | A/G | downstream_transcript_variant | |
| rs1005819469 | -- | 15,106,115(-) | T/C | non_coding_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3640045 | CNV | loss | 21293372 |
| esv3640046 | CNV | gain | 21293372 |
| esv3640056 | CNV | loss | 21293372 |
| esv3892963 | CNV | loss | 25118596 |
| nsv1064686 | CNV | loss | 25217958 |
Additional Variant Information for CDRT8 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CDRT8
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CDRT8 Gene
Disorders for CDRT8 Gene
Additional Disease Information for CDRT8
No disorders were found for CDRT8 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDRT8 Gene
Publications for CDRT8 Gene
- The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. (PMID: 11381029) Inoue K … Birren B (Genome research 2001) 2 3 58
Products for CDRT8 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CDRT8
- Origene Custom Protein Services for CDRT8
- Browse OriGene Inhibitory RNA Products For CDRT8
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CDRT8
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CDRT8
- GenScript: Custom all cDNA clones Services for CDRT8
- GenScript Custom Purified and Recombinant Proteins Services for CDRT8
- GenScript Custom Assay Services for CDRT8
- GenScript Custom overexpressing Cell Line Services for CDRT8
- Browse GenScript CRISPR for CDRT8
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CDRT8
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for CDRT8
- Search GeneTex for Proteins for CDRT8
- Search ViGene Biosciences for CDRT8
Sources for CDRT8 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew