Aliases for CDRT8 Gene
Subcategory (RNA class) for CDRT8 Gene
non-coding RNA
Quality Score for this RNA gene is
3
External Ids for CDRT8 Gene
- HGNC: 14387
- Entrez Gene: 94151
- Ensembl: ENSG00000265163
Previous GeneCards Identifiers for CDRT8 Gene
- GC17U990292
- GC17M015009
Summaries for CDRT8 Gene
GeneCards Summary for CDRT8 Gene
CDRT8 (CMT1A Duplicated Region Transcript 8) is an RNA Gene, and is affiliated with the non-coding RNA class.
No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT8 Gene
Genomics for CDRT8 Gene
Regulatory Elements for CDRT8 Gene
Enhancers for CDRT8 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH17F014299 | 1.8 | FANTOM5 Ensembl ENCODE | 16.2 | +801.1 | 801148 | 12.0 | HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 | HS3ST3B1 ENSG00000262786 ENSG00000266744 LINC02096 RPL23AP76 CDRT7 LOC101928475 LINC02093 CDRT8 MGC12916 |
| GH17F015038 | 0.6 | Ensembl ENCODE | 6 | +67.3 | 67323 | 0.5 | FOS | CDRT8 GC17P015032 GC17P015048 |
| GH17F015039 | 0.2 | ENCODE | 6.5 | +66.6 | 66580 | 0.4 | CDRT8 GC17P015032 GC17P015048 | |
| GH17F015123 | 0.6 | ENCODE | 0.3 | -17.7 | -17738 | 1.8 | ZNF316 SCRT2 MAFG MNT EMSY MAFK | RNU6-799P TEKT3 CDRT8 GC17P015164 |
| GH17F015121 | 0.4 | ENCODE | 0.3 | -15.5 | -15452 | 0.2 | CEBPB | CDRT8 GC17P015164 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CDRT8 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for CDRT8 Gene
- Chromosome:
- 17
- Start:
- 15,104,985 bp from pter
- End:
- 15,106,187 bp from pter
- Size:
- 1,203 bases
- Orientation:
- Minus strand
Genomic View for CDRT8 Gene
Genes around CDRT8 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17p12 by Ensembl
- 17p12 by Entrez Gene
- 17p12 by HGNC
CDRT8 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CDRT8 Gene
Proteins for CDRT8 Gene
Post-translational modifications for CDRT8 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CDRT8
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CDRT8
- Origene Custom Protein Services for CDRT8
- Search GeneTex for Proteins for CDRT8
Assay Products
No data available for DME Specific Peptides for CDRT8 Gene
Domains & Families for CDRT8 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDRT8 Gene
Function for CDRT8 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CDRT8
-
- Search ViGene Biosciences for CDRT8
CRISPR Products
- Browse CRISPR knockouts for CDRT8
miRNA Products
- Search ViGene Biosciences for CDRT8
Inhibitory RNA Products
- Search ViGene Biosciences for CDRT8
Clone Products
- GenScript: Custom all cDNA clones Services for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for CDRT8
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDRT8 Gene
Localization for CDRT8 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CDRT8 Gene
Transcripts for CDRT8 Gene
mRNA/cDNA for CDRT8 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CDRT8
miRNA Products
- Search ViGene Biosciences for CDRT8
Inhibitory RNA Products
- Search ViGene Biosciences for CDRT8
Clone Products
- GenScript: Custom all cDNA clones Services for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CDRT8 Gene
mRNA differential expression in normal tissues according to GTEx for CDRT8 Gene
This gene is overexpressed in Testis (x41.3).
NURSA nuclear receptor signaling pathways regulating expression of CDRT8 Gene:
CDRT8
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CDRT8 Gene
Orthologs for CDRT8 Gene
No data available for Orthologs for CDRT8 Gene
Paralogs for CDRT8 Gene
No data available for Paralogs for CDRT8 Gene
Variants for CDRT8 Gene
| SNP ID | Clin | Chr 17 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs111649071 | -- | 15,105,586(+) | TCTGC(A/G)TTGTG | intron-variant | |
| rs113039225 | -- | 15,106,303(+) | GGAGC(A/G)GGAGG | upstream-variant-2KB | |
| rs11317551 | -- | 15,106,267(+) | ATTGA(-/G)GGTTA | upstream-variant-2KB | |
| rs113308251 | -- | 15,105,261(+) | CATTA(C/G)TGCCA | nc-transcript-variant | |
| rs113830376 | -- | 15,105,104(+) | TCAAC(A/G)GACAC | nc-transcript-variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1064686 | CNV | loss | 25217958 |
| esv3892963 | CNV | loss | 25118596 |
| esv3640056 | CNV | loss | 21293372 |
| esv3640046 | CNV | gain | 21293372 |
| esv3640045 | CNV | loss | 21293372 |
Relevant External Links for CDRT8 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CDRT8
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CDRT8 Gene
Disorders for CDRT8 Gene
Relevant External Links for CDRT8
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- CDRT8
No disorders were found for CDRT8 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDRT8 Gene
Publications for CDRT8 Gene
- The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. (PMID: 11381029) Inoue K. … Birren B. (Genome Res. 2001) 2 3 64
Products for CDRT8 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CDRT8
- Origene Custom Protein Services for CDRT8
- Browse OriGene Inhibitory RNA Products For CDRT8
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CDRT8
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CDRT8
- GenScript: Custom all cDNA clones Services for CDRT8
- GenScript Custom Purified and Recombinant Proteins Services for CDRT8
- GenScript Custom Assay Services for CDRT8
- GenScript Custom overexpressing Cell Line Services for CDRT8
- Browse GenScript CRISPR for CDRT8
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CDRT8
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Search ViGene Biosciences for CDRT8
- Cyagen custom Knockout/knockin (KOKI) mouse models for CDRT8
- VectorBuilder custom plasmid, inducible vectors for CDRT8
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CDRT8
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CDRT8 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab