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Aliases for CDRT7 Gene

Subcategory (RNA class) for CDRT7 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CDRT7 Gene

  • CMT1A Duplicated Region Transcript 7 (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 25 2 3
  • Non-Protein Coding RNA 25 2
  • NCRNA00025 3
  • LINC00025 3

External Ids for CDRT7 Gene

Previous GeneCards Identifiers for CDRT7 Gene

  • GC17U990291
  • GC17P014935
  • GC17P014828

Summaries for CDRT7 Gene

GeneCards Summary for CDRT7 Gene

CDRT7 (CMT1A Duplicated Region Transcript 7 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT7 Gene

Genomics for CDRT7 Gene

Genomic Location for CDRT7 Gene

Chromosome:
17
Start:
15,030,975 bp from pter
End:
15,031,957 bp from pter
Size:
983 bases
Orientation:
Plus strand

Genomic View for CDRT7 Gene

Genes around CDRT7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CDRT7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CDRT7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDRT7 Gene

No data available for Regulatory Elements for CDRT7 Gene

Proteins for CDRT7 Gene

Post-translational modifications for CDRT7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDRT7 Gene

Domains & Families for CDRT7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDRT7 Gene

Function for CDRT7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDRT7 Gene

Localization for CDRT7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CDRT7 Gene

Pathways & Interactions for CDRT7 Gene

SuperPathways for CDRT7 Gene

No Data Available

Interacting Proteins for CDRT7 Gene

Gene Ontology (GO) - Biological Process for CDRT7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CDRT7 Gene

Drugs & Compounds for CDRT7 Gene

No Compound Related Data Available

Transcripts for CDRT7 Gene

mRNA/cDNA for CDRT7 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CDRT7 Gene

CMT1A duplicated region transcript 7 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CDRT7 Gene

No ASD Table

Relevant External Links for CDRT7 Gene

GeneLoc Exon Structure for
CDRT7
ECgene alternative splicing isoforms for
CDRT7

Expression for CDRT7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CDRT7 Gene

NURSA nuclear receptor signaling pathways regulating expression of CDRT7 Gene:

CDRT7

SOURCE GeneReport for Unigene cluster for CDRT7 Gene:

Hs.147654
genes like me logo Genes that share expression patterns with CDRT7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CDRT7 Gene

Orthologs for CDRT7 Gene

Evolution for CDRT7 Gene

ENSEMBL:
Gene Tree for CDRT7 (if available)
TreeFam:
Gene Tree for CDRT7 (if available)

No data available for Orthologs for CDRT7 Gene

Paralogs for CDRT7 Gene

No data available for Paralogs for CDRT7 Gene

Variants for CDRT7 Gene

Sequence variations from dbSNP and Humsavar for CDRT7 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1001356696 -- 15,032,250(+) TTTTC(A/T)TTCAT downstream-variant-500B
rs1002224800 -- 15,031,795(+) ACCTA(A/G)CCAGA nc-transcript-variant
rs1003684119 -- 15,032,344(+) TTACC(C/T)TTATT downstream-variant-500B
rs1003761670 -- 15,030,985(+) ACTGG(A/G/T)GCCAA nc-transcript-variant
rs1004019062 -- 15,031,530(+) TGCAT(A/C/G)TCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CDRT7 Gene

Variant ID Type Subtype PubMed ID
esv3640045 CNV loss 21293372
esv3640046 CNV gain 21293372
esv3640051 CNV loss 21293372
esv3892967 CNV loss 25118596
nsv1055358 CNV loss 25217958
nsv1059356 CNV gain 25217958
nsv1063530 CNV loss 25217958
nsv1064686 CNV loss 25217958

Relevant External Links for CDRT7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CDRT7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CDRT7 Gene

Disorders for CDRT7 Gene

Relevant External Links for CDRT7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CDRT7

No disorders were found for CDRT7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDRT7 Gene

Publications for CDRT7 Gene

  1. The 1.4-Mb CMT1A duplication/HNPP deletion genomic region reveals unique genome architectural features and provides insights into the recent evolution of new genes. (PMID: 11381029) Inoue K. … Birren B. (Genome Res. 2001) 2 3 64

Products for CDRT7 Gene

Sources for CDRT7 Gene

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