Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CDRT15P2 Gene

Aliases for CDRT15P2 Gene

  • CMT1A Duplicated Region Transcript 15 Pseudogene 2 2 3 5
  • CMT1A Duplicated Region Transcript 15-Like 1 2 3
  • CDRT15L1 3

External Ids for CDRT15P2 Gene

Previous HGNC Symbols for CDRT15P2 Gene

  • CDRT15L1

Previous GeneCards Identifiers for CDRT15P2 Gene

  • GC17P015669

Summaries for CDRT15P2 Gene

GeneCards Summary for CDRT15P2 Gene

CDRT15P2 (CMT1A Duplicated Region Transcript 15 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT15P2 Gene

Genomics for CDRT15P2 Gene

Genomic Location for CDRT15P2 Gene

Chromosome:
17
Start:
15,764,703 bp from pter
End:
15,765,689 bp from pter
Size:
987 bases
Orientation:
Plus strand

Genomic View for CDRT15P2 Gene

Genes around CDRT15P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CDRT15P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CDRT15P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDRT15P2 Gene

No data available for Regulatory Elements for CDRT15P2 Gene

Proteins for CDRT15P2 Gene

Post-translational modifications for CDRT15P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDRT15P2 Gene

Domains & Families for CDRT15P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDRT15P2 Gene

Function for CDRT15P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDRT15P2 Gene

Localization for CDRT15P2 Gene

Gene Ontology (GO) - Cellular Components for CDRT15P2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with CDRT15P2: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for CDRT15P2 Gene

Pathways & Interactions for CDRT15P2 Gene

SuperPathways for CDRT15P2 Gene

No Data Available

Interacting Proteins for CDRT15P2 Gene

Gene Ontology (GO) - Biological Process for CDRT15P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CDRT15P2 Gene

Drugs & Compounds for CDRT15P2 Gene

No Compound Related Data Available

Transcripts for CDRT15P2 Gene

mRNA/cDNA for CDRT15P2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CDRT15P2 Gene

CMT1A duplicated region transcript 15 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CDRT15P2 Gene

No ASD Table

Relevant External Links for CDRT15P2 Gene

GeneLoc Exon Structure for
CDRT15P2
ECgene alternative splicing isoforms for
CDRT15P2

Expression for CDRT15P2 Gene

mRNA expression in normal human tissues for CDRT15P2 Gene

mRNA differential expression in normal tissues according to GTEx for CDRT15P2 Gene

This gene is overexpressed in Testis (x40.8) and Brain - Hippocampus (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of CDRT15P2 Gene:

CDRT15P2

SOURCE GeneReport for Unigene cluster for CDRT15P2 Gene:

Hs.513966
genes like me logo Genes that share expression patterns with CDRT15P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CDRT15P2 Gene

Orthologs for CDRT15P2 Gene

Evolution for CDRT15P2 Gene

ENSEMBL:
Gene Tree for CDRT15P2 (if available)
TreeFam:
Gene Tree for CDRT15P2 (if available)

No data available for Orthologs for CDRT15P2 Gene

Paralogs for CDRT15P2 Gene

No data available for Paralogs for CDRT15P2 Gene

Variants for CDRT15P2 Gene

Structural Variations from Database of Genomic Variants (DGV) for CDRT15P2 Gene

Variant ID Type Subtype PubMed ID
dgv3107n100 CNV gain 25217958
dgv562e214 CNV loss 21293372
esv2421582 CNV duplication 20811451
esv2715701 CNV deletion 23290073
esv2715702 CNV deletion 23290073
esv29820 CNV gain+loss 19812545
esv3640083 CNV gain 21293372
esv3892969 CNV loss 25118596
nsv436847 CNV insertion 17901297
nsv442410 CNV gain 18776908
nsv524553 CNV loss 19592680
nsv960062 CNV duplication 23825009

Relevant External Links for CDRT15P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CDRT15P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for CDRT15P2 Gene

Disorders for CDRT15P2 Gene

Relevant External Links for CDRT15P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CDRT15P2

No disorders were found for CDRT15P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDRT15P2 Gene

Publications for CDRT15P2 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3 65
  2. A transcript finishing initiative for closing gaps in the human transcriptome. (PMID: 15197164) Sogayar M.C. … Zanette D.L. (Genome Res. 2004) 3 65

Products for CDRT15P2 Gene

Sources for CDRT15P2 Gene

Content