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Aliases for CDRT15P2 Gene

Aliases for CDRT15P2 Gene

  • CMT1A Duplicated Region Transcript 15 Pseudogene 2 2 3
  • CMT1A Duplicated Region Transcript 15-Like 1 2 3
  • CDRT15L1 3

External Ids for CDRT15P2 Gene

Previous Symbols for CDRT15P2 Gene

  • CDRT15L1

Summaries for CDRT15P2 Gene

GeneCards Summary for CDRT15P2 Gene

CDRT15P2 (CMT1A Duplicated Region Transcript 15 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDRT15P2 Gene

Genomics for CDRT15P2 Gene

Genomic Location for CDRT15P2 Gene

Start:
15,764,703 bp from pter
End:
15,765,689 bp from pter
Size:
987 bases
Orientation:
Plus strand

Genomic View for CDRT15P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CDRT15P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDRT15P2 Gene

No data available for Regulatory Elements for CDRT15P2 Gene

Proteins for CDRT15P2 Gene

Post-translational modifications for CDRT15P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDRT15P2 Gene

Domains for CDRT15P2 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for CDRT15P2 Gene

Function for CDRT15P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CDRT15P2 Gene

Localization for CDRT15P2 Gene

Gene Ontology (GO) - Cellular Components for CDRT15P2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with CDRT15P2: view

Pathways for CDRT15P2 Gene

SuperPathways for CDRT15P2 Gene

No Data Available

Interacting Proteins for CDRT15P2 Gene

Gene Ontology (GO) - Biological Process for CDRT15P2 Gene

None

No data available for Pathways by source for CDRT15P2 Gene

Transcripts for CDRT15P2 Gene

mRNA/cDNA for CDRT15P2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CDRT15P2 Gene

CMT1A duplicated region transcript 15 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CDRT15P2 Gene

No ASD Table

Relevant External Links for CDRT15P2 Gene

GeneLoc Exon Structure for
CDRT15P2
ECgene alternative splicing isoforms for
CDRT15P2

Expression for CDRT15P2 Gene

mRNA expression in normal human tissues for CDRT15P2 Gene

mRNA differential expression in normal tissues according to GTEx for CDRT15P2 Gene

This gene is overexpressed in Testis (40.8) and Brain - Hippocampus (5.4).

SOURCE GeneReport for Unigene cluster for CDRT15P2 Gene Hs.513966

genes like me logo Genes that share expressions with CDRT15P2: view

Orthologs for CDRT15P2 Gene

Evolution for CDRT15P2 Gene

ENSEMBL:
Gene Tree for CDRT15P2 (if available)
TreeFam:
Gene Tree for CDRT15P2 (if available)

No data available for Orthologs for CDRT15P2 Gene

Paralogs for CDRT15P2 Gene

No data available for Paralogs for CDRT15P2 Gene

Variants for CDRT15P2 Gene

Sequence variations from dbSNP and Humsavar for CDRT15P2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs564794 -- 15,763,776(+) GCCTC(C/T)TGAGT upstream-variant-2KB
rs572313 -- 15,764,613(+) ACGAA(C/G)AGAAC upstream-variant-2KB
rs609769 -- 15,764,513(+) GTCAG(C/T)AGCCC upstream-variant-2KB
rs609781 -- 15,764,515(+) CAGCA(A/G)CCCAG upstream-variant-2KB
rs610252 -- 15,764,662(+) AGCGC(C/T)GTAAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for CDRT15P2 Gene

Variant ID Type Subtype PubMed ID
nsv907705 CNV Gain 21882294
esv29820 CNV Gain+Loss 19812545
esv2715701 CNV Deletion 23290073
nsv436847 CNV Insertion 17901297
esv2421582 CNV Duplication 20811451
nsv524553 CNV Loss 19592680
nsv442410 CNV CNV 18776908
esv2715702 CNV Deletion 23290073

Relevant External Links for CDRT15P2 Gene

HapMap Linkage Disequilibrium report
CDRT15P2

Disorders for CDRT15P2 Gene

No disorders were found for CDRT15P2 Gene.

No data available for UniProtKB/Swiss-Prot for CDRT15P2 Gene

Publications for CDRT15P2 Gene

  1. A transcript finishing initiative for closing gaps in the human transcriptome. (PMID: 15197164) Sogayar M.C. … Zanette D.L. (Genome Res. 2004) 3
  2. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3

Products for CDRT15P2 Gene

Sources for CDRT15P2 Gene

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