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Aliases for CDKN2AIPNL Gene

Aliases for CDKN2AIPNL Gene

  • CDKN2A Interacting Protein N-Terminal Like 2 3
  • CDKN2A-Interacting Protein N-Terminal-Like Protein 4

External Ids for CDKN2AIPNL Gene

Summaries for CDKN2AIPNL Gene

GeneCards Summary for CDKN2AIPNL Gene

CDKN2AIPNL (CDKN2A Interacting Protein N-Terminal Like) is a Protein Coding gene. An important paralog of this gene is CDKN2AIP.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDKN2AIPNL Gene

Genomics for CDKN2AIPNL Gene

Genomic Location for CDKN2AIPNL Gene

Start:
134,402,065 bp from pter
End:
134,411,907 bp from pter
Size:
9,843 bases
Orientation:
Minus strand

Genomic View for CDKN2AIPNL Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CDKN2AIPNL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDKN2AIPNL Gene

Regulatory Elements for CDKN2AIPNL Gene

Proteins for CDKN2AIPNL Gene

  • Protein details for CDKN2AIPNL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96HQ2-C2AIL_HUMAN
    Recommended name:
    CDKN2AIP N-terminal-like protein
    Protein Accession:
    Q96HQ2
    Secondary Accessions:
    • Q8WVE3

    Protein attributes for CDKN2AIPNL Gene

    Size:
    116 amino acids
    Molecular mass:
    13196 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for CDKN2AIPNL Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CDKN2AIPNL Gene

Proteomics data for CDKN2AIPNL Gene at MOPED

Post-translational modifications for CDKN2AIPNL Gene

No Post-translational modifications

Other Protein References for CDKN2AIPNL Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CDKN2AIPNL Gene

Domains for CDKN2AIPNL Gene

Protein Domains for CDKN2AIPNL Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

C2AIL_HUMAN
Family:
  • Belongs to the CARF family.:
    • Q96HQ2
genes like me logo Genes that share domains with CDKN2AIPNL: view

No data available for Gene Families for CDKN2AIPNL Gene

Function for CDKN2AIPNL Gene

miRNA for CDKN2AIPNL Gene

miRTarBase miRNAs that target CDKN2AIPNL

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for CDKN2AIPNL Gene

Localization for CDKN2AIPNL Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CDKN2AIPNL Gene COMPARTMENTS Subcellular localization image for CDKN2AIPNL gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for CDKN2AIPNL Gene

Pathways for CDKN2AIPNL Gene

SuperPathways for CDKN2AIPNL Gene

No Data Available

Interacting Proteins for CDKN2AIPNL Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000394183%0d%0a9606.ENSP00000344818%0d%0a9606.ENSP00000366396%0d%0a
Selected Interacting proteins: ENSP00000394183 for CDKN2AIPNL Gene via STRING

Gene Ontology (GO) - Biological Process for CDKN2AIPNL Gene

None

No data available for Pathways by source for CDKN2AIPNL Gene

Transcripts for CDKN2AIPNL Gene

mRNA/cDNA for CDKN2AIPNL Gene

Unigene Clusters for CDKN2AIPNL Gene

CDKN2A interacting protein N-terminal like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CDKN2AIPNL Gene

No ASD Table

Relevant External Links for CDKN2AIPNL Gene

GeneLoc Exon Structure for
CDKN2AIPNL
ECgene alternative splicing isoforms for
CDKN2AIPNL

Expression for CDKN2AIPNL Gene

mRNA expression in normal human tissues for CDKN2AIPNL Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for CDKN2AIPNL Gene

SOURCE GeneReport for Unigene cluster for CDKN2AIPNL Gene Hs.156506

genes like me logo Genes that share expressions with CDKN2AIPNL: view

Orthologs for CDKN2AIPNL Gene

This gene was present in the common ancestor of animals.

Orthologs for CDKN2AIPNL Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CDKN2AIPNL 36
  • 100 (n)
  • 100 (a)
CDKN2AIPNL 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CDKN2AIPNL 36
  • 91.67 (n)
  • 96.55 (a)
CDKN2AIPNL 37
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CDKN2AIPNL 36
  • 92.24 (n)
  • 99.14 (a)
CDKN2AIPNL 37
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Cdkn2aipnl 36
  • 89.08 (n)
  • 96.55 (a)
Cdkn2aipnl 16
Cdkn2aipnl 37
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CDKN2AIPNL 37
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 2 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Cdkn2aipnl 36
  • 88.51 (n)
  • 95.69 (a)
lizard
(Anolis carolinensis)
Reptilia CDKN2AIPNL 37
  • 65 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.27136 36
tropical clawed frog
(Silurana tropicalis)
Amphibia cdkn2aipnl 36
  • 65.22 (n)
  • 59.78 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.7108 36
zebrafish
(Danio rerio)
Actinopterygii cdkn2aipnl 36
  • 64.76 (n)
  • 53.33 (a)
cdkn2aipnl 37
  • 49 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG31301 37
  • 5 (a)
OneToMany
Species with no ortholog for CDKN2AIPNL:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CDKN2AIPNL Gene

ENSEMBL:
Gene Tree for CDKN2AIPNL (if available)
TreeFam:
Gene Tree for CDKN2AIPNL (if available)

Paralogs for CDKN2AIPNL Gene

Paralogs for CDKN2AIPNL Gene

Selected SIMAP similar genes for CDKN2AIPNL Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for CDKN2AIPNL Gene

genes like me logo Genes that share paralogs with CDKN2AIPNL: view

Variants for CDKN2AIPNL Gene

Sequence variations from dbSNP and Humsavar for CDKN2AIPNL Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs11939 -- 134,402,697(+) TTTAT(A/T)AATAC utr-variant-3-prime
rs184485 -- 134,402,457(+) atcgc(C/G)ccact utr-variant-3-prime
rs328042 -- 134,401,584(+) GTACA(G/T)AACAG downstream-variant-500B
rs328043 -- 134,409,707(+) ACAAT(A/G)CATAA intron-variant
rs729800 -- 134,406,190(+) TAGCC(A/G)TAAAG intron-variant

Relevant External Links for CDKN2AIPNL Gene

HapMap Linkage Disequilibrium report
CDKN2AIPNL

No data available for Structural Variations from Database of Genomic Variants (DGV) for CDKN2AIPNL Gene

Disorders for CDKN2AIPNL Gene

No disorders were found for CDKN2AIPNL Gene.

No data available for UniProtKB/Swiss-Prot for CDKN2AIPNL Gene

Publications for CDKN2AIPNL Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  3. TRIM65 regulates microRNA activity by ubiquitination of TNRC6. (PMID: 24778252) Li S. … Dorf M.E. (Proc. Natl. Acad. Sci. U.S.A. 2014) 3
  4. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for CDKN2AIPNL Gene

Sources for CDKN2AIPNL Gene

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