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Aliases for CDKL4 Gene

Aliases for CDKL4 Gene

  • Cyclin-Dependent Kinase-Like 4 2 3
  • EC 2.7.11.22 4 64
  • EC 2.7.11 64

External Ids for CDKL4 Gene

Summaries for CDKL4 Gene

GeneCards Summary for CDKL4 Gene

CDKL4 (Cyclin-Dependent Kinase-Like 4) is a Protein Coding gene. GO annotations related to this gene include cyclin-dependent protein serine/threonine kinase activity. An important paralog of this gene is CDKL3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDKL4 Gene

Genomics for CDKL4 Gene

Genomic Location for CDKL4 Gene

Start:
39,175,646 bp from pter
End:
39,243,973 bp from pter
Size:
68,328 bases
Orientation:
Minus strand

Genomic View for CDKL4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CDKL4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDKL4 Gene

Regulatory Elements for CDKL4 Gene

Proteins for CDKL4 Gene

  • Protein details for CDKL4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5MAI5-CDKL4_HUMAN
    Recommended name:
    Cyclin-dependent kinase-like 4
    Protein Accession:
    Q5MAI5
    Secondary Accessions:
    • Q2NME9

    Protein attributes for CDKL4 Gene

    Size:
    379 amino acids
    Molecular mass:
    43384 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for CDKL4 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CDKL4 Gene

Proteomics data for CDKL4 Gene at MOPED

Selected DME Specific Peptides for CDKL4 Gene

Post-translational modifications for CDKL4 Gene

No Post-translational modifications

Other Protein References for CDKL4 Gene

Domains for CDKL4 Gene

Gene Families for CDKL4 Gene

Protein Domains for CDKL4 Gene

UniProtKB/Swiss-Prot:

CDKL4_HUMAN
Domain:
  • The [NKR]KIAxRE motif seems to be a cyclin-binding region:
    • Q5MAI5
  • Contains 1 protein kinase domain.:
    • Q5MAI5
Family:
  • Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.:
    • Q5MAI5
genes like me logo Genes that share domains with CDKL4: view

Function for CDKL4 Gene

Molecular function for CDKL4 Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + a protein = ADP + a phosphoprotein

Enzyme Numbers (IUBMB) for CDKL4 Gene

Gene Ontology (GO) - Molecular Function for CDKL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity --
GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEA --
GO:0004713 protein tyrosine kinase activity --
GO:0005524 ATP binding IEA --
GO:0016772 transferase activity, transferring phosphorus-containing groups --
genes like me logo Genes that share ontologies with CDKL4: view

Phenotypes for CDKL4 Gene

GenomeRNAi human phenotypes for CDKL4:
genes like me logo Genes that share phenotypes with CDKL4: view

No data available for Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CDKL4 Gene

Localization for CDKL4 Gene

Subcellular locations from UniProtKB/Swiss-Prot for CDKL4 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CDKL4 Gene COMPARTMENTS Subcellular localization image for CDKL4 gene
Compartment Confidence
cytosol 2
mitochondrion 2
endoplasmic reticulum 1
nucleus 1

Gene Ontology (GO) - Cellular Components for CDKL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with CDKL4: view

Pathways for CDKL4 Gene

SuperPathways for CDKL4 Gene

No Data Available

Interacting Proteins for CDKL4 Gene

Gene Ontology (GO) - Biological Process for CDKL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006468 protein phosphorylation IEA --
GO:0008152 metabolic process --
GO:0051726 regulation of cell cycle IEA --
genes like me logo Genes that share ontologies with CDKL4: view

No data available for Pathways by source for CDKL4 Gene

Compounds for CDKL4 Gene

(2) HMDB Compounds for CDKL4 Gene

Compound Synonyms Cas Number PubMed IDs
Adenosine triphosphate
  • 5'-(tetrahydrogen triphosphate) Adenosine
56-65-5
ADP
  • adenosindiphosphorsaeure
58-64-0
genes like me logo Genes that share compounds with CDKL4: view

Transcripts for CDKL4 Gene

mRNA/cDNA for CDKL4 Gene

(6) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CDKL4 Gene

Cyclin-dependent kinase-like 4:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CDKL4 Gene

No ASD Table

Relevant External Links for CDKL4 Gene

GeneLoc Exon Structure for
CDKL4
ECgene alternative splicing isoforms for
CDKL4

Expression for CDKL4 Gene

mRNA expression in normal human tissues for CDKL4 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CDKL4 Gene

This gene is overexpressed in Testis (14.1).

SOURCE GeneReport for Unigene cluster for CDKL4 Gene Hs.403201

genes like me logo Genes that share expressions with CDKL4: view

Orthologs for CDKL4 Gene

This gene was present in the common ancestor of animals.

Orthologs for CDKL4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CDKL4 36
  • 98.4 (n)
  • 97.12 (a)
CDKL4 37
  • 81 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CDKL4 36
  • 92.7 (n)
  • 94.29 (a)
CDKL4 37
  • 94 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CDKL4 36
  • 92.12 (n)
  • 93.29 (a)
CDKL4 37
  • 87 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Cdkl4 36
  • 83.07 (n)
  • 90.73 (a)
Cdkl4 16
Cdkl4 37
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CDKL4 37
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CDKL4 37
  • 75 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Cdkl4 36
  • 83.08 (n)
  • 89.62 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7236 37
  • 36 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea Y42A5A.4 37
  • 38 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 65 (a)
OneToOne
Species with no ortholog for CDKL4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for CDKL4 Gene

ENSEMBL:
Gene Tree for CDKL4 (if available)
TreeFam:
Gene Tree for CDKL4 (if available)

Paralogs for CDKL4 Gene

Paralogs for CDKL4 Gene

genes like me logo Genes that share paralogs with CDKL4: view

Variants for CDKL4 Gene

Sequence variations from dbSNP and Humsavar for CDKL4 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs868841 -- 39,223,947(+) TAAGG(G/T)GAGGC intron-variant
rs1197380 -- 39,201,511(-) tgcaa(A/G)tatat intron-variant
rs1510113 -- 39,181,603(+) ataag(G/T)tcttt intron-variant
rs1543026 -- 39,225,636(-) CTACC(A/G)CAGAT intron-variant
rs1548170 -- 39,206,423(-) GATGA(C/G)GCAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CDKL4 Gene

Variant ID Type Subtype PubMed ID
nsv873885 CNV Loss 21882294
esv2666347 CNV Deletion 23128226
nsv833847 CNV Loss 17160897
esv2719953 CNV Deletion 23290073
esv1085195 CNV Deletion 17803354
esv2677029 CNV Deletion 23128226

Relevant External Links for CDKL4 Gene

HapMap Linkage Disequilibrium report
CDKL4

Disorders for CDKL4 Gene

Relevant External Links for CDKL4

Genetic Association Database (GAD)
CDKL4
Human Genome Epidemiology (HuGE) Navigator
CDKL4
genes like me logo Genes that share disorders with CDKL4: view

No data available for UniProtKB/Swiss-Prot for CDKL4 Gene

Publications for CDKL4 Gene

  1. Novel mutations in the CDKL5 gene, predicted effects and associated phenotypes. (PMID: 19241098) Russo S. … Larizza L. (Neurogenetics 2009) 3 49
  2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 4
  3. Patterns of somatic mutation in human cancer genomes. (PMID: 17344846) Greenman C. … Stratton M.R. (Nature 2007) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for CDKL4 Gene

Sources for CDKL4 Gene

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