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CDK4 Gene

protein-coding   GIFtS: 74

GC12M056428
cyclin-dependent kinase 4
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
CMM3 2, 5
EC 2.7.11.22 3
MGC14458 2
PSK-J3 1, 2, 3
Descriptions
cell division kinase 4 2
cyclin-dependent kinase 4 2, 3
melanoma cutaneous malignant, 3 2
External Ids
HGNC: 17731
Entrez Gene: 10192
UniProtKB: P118023
Ensembl: ENSG000001354467
Search outside databases for aliases for CDK4 gene

Previous GC identifers: GC12M057743 GC12M058284 GC12M057858

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for CDK4:
The protein encoded by this gene is a member of the Ser/Thr protein kinase family. This protein is
highly similar to the gene products of S. cerevisiae cdc28 and S. pombe cdc2. It is a catalytic
subunit of the protein kinase complex that is important for cell cycle G1 phase progression. The
activity of this kinase is restricted to the G1-S phase, which is controlled by the regulatory
subunits D-type cyclins and CDK inhibitor p16(INK4a). This kinase was shown to be responsible for
the phosphorylation of retinoblastoma gene product (Rb). Mutations in this gene as well as in its
related proteins including D-type cyclins, p16(INK4a) and Rb were all found to be associated with
tumorigenesis of a variety of cancers. Multiple polyadenylation sites of this gene have been
reported. [provided by RefSeq]

UniProtKB/Swiss-Prot: CDK4_HUMAN, P11802
Function: Probably involved in the control of the cell cycle

Gene Wiki entry for CDK4 (Cyclin-dependent_kinase_4)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the CDK4 gene  

Entrez Gene cytogenetic band: 12q14   Ensembl cytogenetic band:  12q14.1   HGNC cytogenetic band: 12q13

CDK4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12M056428:     (about GC identifiers)

Start:
56,428,270 bp from pter
End:
56,432,431 bp from pter
Size:
4,162 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000012.10  NT_029419.11  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: CDK4_HUMAN, P11802 (See protein sequence)
Recommended Name: Cell division protein kinase 4  
Size: 303 amino acids; 33730 Da
Subunit: Forms a stable complex with D-type G1 cyclins. Interacts with SEI1 and ZNF655/VIK
PDB structures from and Proteopedia :
1LD2 (3D)    2W96 (3D)    2W99 (3D)    2W9F (3D)    2W9Z (3D)    3G33 (3D)    
Secondary accessions: O00576

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_000066.1  

    ENSEMBL proteins: 
    ENSP00000316889 ENSP00000257904 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Sigma-Aldrich Proteins for CDK4  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Cdk4 + Cyclin D1, Cdks, Cdk4)
    Human Recombinant Proteins from Abnova (CDK4)
                  OriGene Purified Recombinant Human Protein: CDK4 

    5 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEA--
    GO:0005634 nucleus IDA16109376
    GO:0005654 nucleoplasm EXP9190208 16782892
    GO:0005667 transcription factor complex IEA--
    GO:0005829 cytosol EXP9106657
    About this table

    Antibodies for CDK4: 
    Invitrogen Antibodies for CDK4
    Millipore Mono- and Polyclonal Antibodies for the study of CDK4
    Sigma-Aldrich Antibody Arrays and Antibodies for CDK4
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for CDK4 
    Antibodies from Abcam (Cdk4 + Cyclin D1, Cdks, Cdk4), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (CDK4)
    Novus Biologicals Antibodies for CDK4

    Assays for CDK4: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5 InterPro domains/families:
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser_thr_pkinase
     IPR008271 Ser_thr_pkin_AS
     IPR000719 Prot_kinase_core
     IPR017442 Se/Thr_pkinase-rel


       GeneDecks  CDK4 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P11802

    ProtoNet protein and cluster: P11802

    UniProtKB/Swiss-Prot: CDK4_HUMAN, P11802
    Similarity: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family.
    CDC2/CDKX subfamily
    Similarity: Contains 1 protein kinase domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CDK4)
    Millipore RNAi Products for the Analysis of CDK4 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (CDK4)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_000075

                  Applied Biosystems Silencer® siRNAs for CDK4

                  Sigma-Aldrich siRNA and siRNA Panels for CDK4  
                         Sigma-Aldrich shRNA Panels and shRNA for CDK4  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for CDK4
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_000075
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_000075
                                     untagged cDNA clones in CMV expression vector (see all 5): NM_000075 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_000075

    UniProtKB/Swiss-Prot: CDK4_HUMAN, P11802
    Function: Probably involved in the control of the cell cycle
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Phosphorylation at Thr-172 is necessary for enzymatic activity (By similarity)
    Enzyme Number (IUBMB): EC 2.7.11.22 

    Genatlas biochemistry entry for CDK4:
    cyclin dependent kinase 4 involved in cell cycle regulation (G1 to S transition),complexing with
    cyclin D (D1,D2,D3),amplified in malignant glioblastoma and anaplastic astrocytoma,and in diffuse
    large B cell lymphoma ; amplified in osteosarcoma with OS9,SAS and PRIM1and in sporadic breast
    carcinomas,predisposing to familial melanoma by inducing abnormal repair of ultraviolet radiation.
    Loss of CDK4 expression causes insulin deficient diabetes,and CDK4 activation results in B islet
    cell hyperplasia in mice

    15/21 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Cdk4) (see all 21 ):

    behavior/neurologicalcellulardigestive/alimentaryembryogenesis
    endocrine/exocrine glandgrowth/sizehematopoietic systemhomeostasis/metabolismimmune system
    lethality-postnatallethality-prenatal/perinatalliver/biliary systemmusclenervous system

    5 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0004693 cyclin-dependent protein kinase activity IEA--
    GO:0005515 protein binding IPI9106657 11896535 15232106 15558030 16169070 16326706 17274640 17353931 17517622
    GO:0005524 ATP binding IEA--
    GO:0016740 transferase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    5/6 Invitrogen iPath™ Online BioAtlas - Pathways for CDK4 (see all 6 ) (Maps provided by GeneGo):
     Cdc25 regulation of cell cycle
     Opioid and somatostatin systems in negative cell growth regulation via MAP kinase pathways
     ATM/ATR regulation of G1/S checkpoint
     MAPK cascade. Part IV, Map 3. Nuclear function of p38-MAPK
     Regulatory cascade of cyclin gene expression

       GeneDecks  CDK4 for the pathways selected above  
    About GeneDecksing

    5/13 Millipore Pathways for CDK4 (see all 13 )
     DNA damage ATM/ATR regulation of G1/S checkpoint
     Cell cycle Regulation of G1/S transition (part 2)
     Cell cycle Role of APC in cell cycle regulation
     Meiosis
     Cell cycle Regulation of G1/S transition (part 1)

       GeneDecks  CDK4 for the pathways selected above  
    About GeneDecksing

    5/14 Sigma-Aldrich "Your Favorite Gene" Pathways for  CDK4  (Your Favorite Gene powered by Ingenuity) (see all 14
     Melanoma Signaling
     Aryl Hydrocarbon Receptor Signaling
     Molecular Mechanisms of Cancer
     Tight Junction Signaling
     Nicotinate and Nicotinamide Metabolism

       GeneDecks  CDK4 for the pathways selected above  
    About GeneDecksing

    5/12 Kegg Pathways  (Kegg details for CDK4) (see all 12 ):
     hsa04110 Cell cycle
     hsa04115 p53 signaling pathway
     hsa04530 Tight junction
     hsa04660 T cell receptor signaling pathway
     hsa05200 Pathways in cancer

       GeneDecks  CDK4 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  CDK4 


    5/132 Interacting proteins for CDK4 (ENSP000002579043 P118021, 2) via UniProtKB, MINT, and/or STRING (see all 132 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CCND2P302791STRING (score=.999) EBI-295644, EBI-748789
    CDC37Q165431STRING (score=.999) EBI-295644, EBI-295634
    CDKN2AP427711STRING (score=.999) EBI-295644, EBI-375053
    CDKN2BP427721STRING (score=.999) EBI-295644, EBI-711280
    CDKN2CP427731STRING (score=.999) EBI-295644, EBI-711290
    About this table

    5/10 Gene Ontology (GO) biological process terms (links to tree view) (see all 10 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000082 G1/S transition of mitotic cell cycle IMP7603984
    GO:0006468 protein amino acid phosphorylation IEA--
    GO:0007165 signal transduction IEA--
    GO:0007623 circadian rhythm IEA--
    GO:0010468 regulation of gene expression IMP17420273
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Enzo Life Sciences drugs & compounds for CDK4
    Sigma-Aldrich Small Molecules for CDK4:
    Inhibitor

    Compounds for CDK4 available from Tocris Bioscience
    CompoundAction CAS number
    RyuvidineCyclin-dependent kinase 4 (cdk4) inhibitor[265312-55-8]
    NSC 625987Cyclin-dependent kinase 4 (cdk4) inhibitor[141992-47-4]
    About this table


    10/52 Novoseek chemical compound relationships for CDK4 gene (see all 52 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    fascaplysin 84.43 12 10973815 (4), 16816972 (2), 16936279 (1), 16904725 (1) (see all 6)
    nu6102 69.63 2 15928920 (2)
    17-(allylamino)-17-demethoxygeldanamycin 63.78 4 18281495 (1), 18245548 (1), 18193424 (1), 17157164 (1)
    imidazo[1,2-a]pyridine 42.32 1 12941325 (1)
    thymidine 40.22 6 15665290 (1), 10432388 (1), 8622883 (1), 12153614 (1) (see all 6)
    bromodeoxyuridine 36.49 3 8988060 (2), 15755480 (1)
    pga2 30.47 7 8622677 (4), 8621603 (1)
    threonine 28.91 12 10851085 (2), 17892862 (2), 12861061 (1), 18855578 (1) (see all 7)
    apigenin 27.71 4 18656338 (1), 11299771 (1), 15620704 (1)
    berberine 27.35 5 18379040 (1), 19189664 (1), 16621886 (1), 16505103 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CDK4)
    Millipore RNAi Products for the Analysis of CDK4 Gene knock-down
    Abnova Chimera RNAi Products for Gene knock-down (CDK4)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_000075

                  Sigma-Aldrich siRNA and siRNA Panels for CDK4  
                         Sigma-Aldrich shRNA Panels and shRNA for CDK4  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_000075  

    REFSEQ mRNAs for CDK4 gene: 

    NM_000075.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_000075  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_000075
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_000075
                                     untagged cDNA clones in CMV expression vector (see all 5): NM_000075 

    Additional cDNA sequence: 

    AK297901.1 AK310724.1 AK313701.1 BC003644.2 BC005864.2 BC010153.2 BC015669.2 CR407668.1 
    CR542247.1 CR590586.1 CR591116.1 CR594194.1 CR597992.1 CR598582.1 CR602761.1 CR602927.1 
    CR608247.1 CR609991.1 CR616342.1 CR622282.1 M14505.1 U79269.1 Z48970.1 

    24/25 DOTS entries (see all 25 ):

    DT.219465  DT.100851448  DT.92408932  DT.40113477  DT.100851457  DT.95222712  DT.97856917  DT.100851439 
    DT.121198842  DT.121198896  DT.95284131  DT.97789050  DT.121198761  DT.91928527  DT.100716609  DT.121198886 
    DT.40118681  DT.445603  DT.91772477  DT.91921800  DT.95339064  DT.95339068  DT.95339116  DT.97860433 

    24/974 AceView cDNA sequences (see all 974 ):

    BU850002 AW298172 BF222951 BE905374 BM472703 BU165914 CB143270 CB160114 
    AI264566 BE383376 AW411404 AI674577 BI255420 AA356998 AI567341 BU943900 
    CR597992 BQ681906 F04615 BM458189 BQ232036 BU520905 AU104590 AA235586 

    highest scoring ESTs for CDK4:

    AA315694 AA338741 AA339057 AA362679 AL546134 AL602986 AU117043 AW246398 AW410442 AW411404 

    Unigene Cluster for CDK4:

    Cyclin-dependent kinase 4
    Hs.95577  [show with all ESTs]
    Unigene Representative Sequence: BM467999


    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for CDK4 (see all 9 )

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b · 2c · 2d ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b
    SP1:                                -                                               -     -                                 
    SP2:                                -                                         -           -                                 
    SP3:                                -     -     -                                   -     -                                 
    SP4:                                -     -     -     -                             -     -                                 
    SP5:                                -     -                                                                                 

    About this scheme

    ECgene alternative splicing isoforms for CDK4

    2 Ensembl transcripts including schematic representations:
    ENST00000312990  ENST00000257904  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    CDK4 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for CDK4

    1 / 2 / 3

    3 probe-sets matching CDK4 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    1942_s_at2, 3 U95-A 2 1.00 0.97 1.00 1.00 U37022 0.20 1.00 0.72 1

    202246_s_at2, 3 U133-A 2 1.00 0.91 -- -- NM_000075 0.40 0.67 0.55 1

    202246_s_at2 U133Plus2 2 1.00 0.91 -- -- -- -- -- -- --
    GeneDecks  CDK4 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: GAAGGAAGAA

    SOURCE GeneReport for Unigene cluster: Hs.95577

    Expression variation in blood from EXPOLDB for CDK4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for CDK4 gene from 5/10 species (see all 10 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    CDK41   -- cyclin-dependent kinase 4 90.76(n)
    97.03(a)
    481131  XM_538252.2  XP_538252.1 
    chimpanzee
    (Pan troglodytes)
    CDK41   -- cyclin-dependent kinase 4 99.89(n)
    100(a)
    452025  XM_509173.2  XP_509173.2 
    cow
    (Bos taurus)
    CDK41   -- cyclin-dependent kinase 4 92.52(n)
    97.03(a)
    510618  NM_001037594.1  NP_001032683.1 
    rat
    (Rattus norvegicus)
    Cdk41   -- cyclin-dependent kinase 4 87.9(n)
    95.05(a)
    94201  NM_053593.2  NP_446045.1 
    mouse
    (Mus musculus)
    Cdk41, 5 105
    cyclin-dependent kinase 41, 5 88.12(n)1
    94.72(a)1
    125671  NM_009870.21  NP_034000.11 
     AA7919625  AF2233905  (see all 26)
    About this table        Species with no ortholog for CDK4

    ENSEMBL Gene Tree for CDK4
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for CDK4 gene
    CDK62  CCRK2  CDK72  

    Pseudogenes
    1 related pseudogene


    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/53 NCBI SNPs in CDK4 are shown (see all 53 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 65)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 12 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    --
    rs2385321,2
    C,F,H56432648(+) ACCCCC/TGCTGC 1 -- ng318Minor allele frequency- T:0.00EA NA NS EU WA 622
    rs32116071,2
    C,F,H56433043(-) TAGAAG/TACCCC 1 -- ng3110Minor allele frequency- T:0.02NS EU EA WA MN CSAM 972
    rs20720521,2
    C,F,H56432986(+) CTGTCC/ACTGGC 1 -- ng3113Minor allele frequency- A:0.43EA NS EU WA MN CSAM 2262
    rs20695001,2
    C,F,H56432464(-) GTGGCG/AGTCAC 1 -- ng315Minor allele frequency- A:0.01NA EA WA NS 634
    rs32116121,2
    H56431366(-) ATCCCG/AAACTG 1 Q/R mis1 ese35Minor allele frequency- A:0.00NS EU EA WA 594
    --
    rs32116061,2
    F56433152(-) GTGAGAG/-GATTA 1 -- ng311Minor allele frequency- -:0.01NS 154
    rs115473281,2
    H56431698(-) AGGCCC/TGTGAT 1 R/C mis1 ese34Minor allele frequency- T:0.00EU EA WA 406
    rs343865321,2
    C56431130(+) ACTGGC/TGCATC 1 R/H mis14Minor allele frequency- T:0.00EU EA WA 420
    --
    rs49868651,2
    F56432950(-) CATACA/TCACTG 1 -- ng315Minor allele frequency- T:0.01MN CSAM EA 408
    --
    rs111723211,2
    C56432721(+) GGCCAC/TCCAGA 1 -- ng310--------
    About this table

    HapMap Linkage Disequilibrium images for CDK4 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 123829   disorders: 609048  

    UniProtKB/Swiss-Prot: CDK4_HUMAN, P11802

  • CDK4 mutations are involved in tumor formation
  • Defects in CDK4 are the cause of cutaneous malignant melanoma 3 (CMM3) [MIM:609048,
    155600]. Malignant melanoma is a malignant neoplasm of melanocytes, arising de novo or from a
    preexisting benign nevus, which occurs most often in the skin but also may involve other sites
  • 10/95 Novoseek disease relationships for CDK4 gene (see all 95 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    retinoblastoma 91.78 183 10493518 (2), 9103470 (2), 7585516 (2), 9488660 (2) (see all 99)
    liposarcoma dedifferentiated 76.79 14 15221942 (4), 18214854 (2), 12640106 (1), 18204431 (1) (see all 9)
    tumors 70.74 362 17139501 (5), 9703873 (5), 16160477 (5), 12163365 (4) (see all 99)
    melanoma 70.33 227 8746340 (5), 9036865 (5), 9311594 (5), 17505264 (4) (see all 99)
    liposarcoma 67.48 20 14694526 (4), 18820664 (3), 9713346 (2), 12640106 (1) (see all 11)
    cancer 67.30 115 11756559 (4), 10398121 (3), 14648178 (2), 17481885 (2) (see all 85)
    multiple tumors 62.68 18 8821952 (2), 9827724 (1), 10094876 (1), 7744694 (1) (see all 17)
    glioblastoma 61.99 34 8806696 (4), 8811128 (4), 9600204 (3), 8586464 (2) (see all 14)
    anaplastic astrocytoma 60.11 3 7987821 (1), 16319692 (1), 9161727 (1)
    glioma 56.33 30 7585516 (3), 9815774 (3), 7954404 (2), 10587703 (2) (see all 19)
    About this table

    Human Gene Mutation Database: CDK4
    Genetic Association Database: CDK4
    Human Genome Epidemiology Navigator: CDK4 (30 documents)
    Tumor Gene Database: CDK4

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/1329 PubMed articles for CDK4 gene (see all 1329 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 1019 HGNC: 1773 AceView: CDK4 Ensembl:ENSG00000135446 euGenes: HUgn1019
    ECgene: CDK4 H-InvDB: CDK4
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for CDK4 Genetics and Cytogenetics in Oncology and Haematology
    GeneReviewshttp://www.genetests.org/query?gene=CDK4
    NIEHS-SNPshttp://egp.gs.washington.edu/data/cdk4/
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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