CDK2 Gene
protein-coding GIFtS : 76
GCID: GC12 P056360
cyclin-dependent kinase 2
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Aliasesfor CDK2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Cyclin-Dependent Kinase 2 1 2 Cell Devision Kinase 22 Cell Division Protein Kinase 22 3 P33(CDK2)1 P33 Protein Kinase2 3 CDKN23 EC 2.7.11.223 8 EC 2.7.118 Cdc2-Related Protein Kinase2
Export aliases for CDK2 gene to outside databases Previous GC identifers: GC12M056216 GC12P056923 GC12P056077 GC12P054646 GC12P053399
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Summariesfor CDK2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for CDK2 : The protein encoded by this gene is a member of the Ser/Thr protein kinase family. This protein kinase is highly similar to the gene products of S. cerevisiae cdc28, and S. pombe cdc2. It is a catalytic subunit of the cyclin-dependent protein kinase complex, whose activity is restricted to the G1-S phase, and essential for cell cycle G1/S phase transition. This protein associates with and regulated by the regulatory subunits of the complex including cyclin A or E, CDK inhibitor p21Cip1 (CDKN1A) and p27Kip1 (CDKN1B). Its activity is also regulated by its protein phosphorylation. Two alternatively spliced variants and multiple transcription initiation sites of this gene have been reported. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: CDK2_HUMAN, P24941 Function : Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, butdispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization summary
for CDK2 : Cdks (cyclin-dependent kinases) are heteromeric serine/threonine kinases that control progression throughthe cell cycle in concert with their regulatory subunits, the cyclins. Although there are 12 different cdkgenes, only 5 have been shown to directly drive the cell cycle (Cdk1, -2, -3, -4, and -6). Followingextracellular mitogenic stimuli, cyclin D gene expression is upregulated. Cdk4 forms a complex with cyclin Dand phosphorylates Rb protein, leading to liberation of the transcription factor E2F. E2F inducestranscription of genes including cyclins A and E, DNA polymerase and thymidine kinase. Cdk4-cyclin Ecomplexes form and initiate G1/S transition. Subsequently, Cdk1-cyclin B complexes form and induce G2/Mphase transition. Cdk1-cyclin B activation induces the breakdown of the nuclear envelope and the initiationof mitosis. Cdks are constitutively expressed and are regulated by several kinases and phosphastases,including Wee1, CDK-activating kinase and Cdc25 phosphatase. In addition, cyclin expression is induced bymolecular signals at specific points of the cell cycle, leading to activation of Cdks. Tight control of Cdksis essential as misregulation can induce unscheduled proliferation, and genomic and chromosomal instability.Cdk4 has been shown to be mutated in some types of cancer, whilst a chromosomal rearrangement can lead toCdk6 overexpression in lymphoma, leukemia and melanoma. Cdks are currently under investigation as potentialtargets for antineoplastic therapy, but as Cdks are essential for driving each cell cycle phase, therapeuticstrategies that block Cdk activity are unlikely to selectively target tumor cells. Gene Wiki entry for CDK2 (Cyclin-dependent kinase 2)
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Genomic Viewsfor CDK2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000012.11 NC_018923.1 NT_029419.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CDK2 gene promoter: C/EBPbeta Sp1 Other transcription factors Search SABiosciences Chromatin IP Primers for CDK2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CDK2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 12q13 Ensembl cytogenetic band: 12q13.2 HGNC cytogenetic band: 12q13 CDK2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P056360: view genomic region
(about GC identifiers )
Start:
56,360,553 bp from pter
End:
56,366,568 bp from pter
Size:
6,016 bases
Orientation:
plus strand
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Proteinsfor CDK2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CDK2_HUMAN, P24941 (See
protein sequence )Recommended Name: Cyclin-dependent kinase 2 Size : 298 amino acids; 33930 Da
Subunit : Found in a complex with CABLES1, CCNA1 and CCNE1. Interacts with CABLES1 (By similarity). Interacts withUHRF2. Part of a complex consisting of UHRF2, CDK2 and CCNE1. Interacts with the Speedy/Ringo proteins SPDYA and SPDYC. Found in a complex with both SPDYA and CDKN1B/KIP1. Binds to RB1 and CDK7. Binding to CDKN1A (p21) leads to CDK2/cyclin E inactivation at the G1-S phase DNA damage checkpoint, thereby arresting cells at the G1-S transition during DNA repair. Associated with PTPN6 and beta-catenin/CTNNB1. Interacts with CACUL1. May interact with CEP63
Subcellular location : Cytoplasm, cytoskeleton, centrosome. Nucleus, Cajal body. Cytoplasm. Endosome. Note=Localized atthe centrosomes in late G2 phase after separation of the centrosomes but before the start of prophase. Nuclear-cytoplasmic trafficking is mediated during the inhibition by 1,25-(OH)(2)D(3)
6/315 PDB 3D structures from and Proteopedia for CDK2 (see all 315 ):1AQ1 (3D)
  1B38 (3D)
  1B39 (3D)
  1BUH (3D)
  1CKP (3D)
  1DI8 (3D)
 
Secondary accessions : A8K7C6 O75100Alternative splicing : 2 isoforms : P24941-1 P24941-2 Explore the universe of human proteins at neXtProt for CDK2: NX_P24941 Post-translational modifications:
Phosphorylated at Thr-160 by CDK7 in a CAK complex. Phosphorylation at Thr-160 promotes kinase activity, whereas phosphorylation at Tyr-15 by WEE1 reduces slightly kinase activity. Phosphorylated on Thr-14 and Tyr-15 during S and G2 phases before being dephosphorylated by CDC25A1
Nitrosylated after treatment with nitric oxide (DETA-NO)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P24941 4/25 DME Specific Peptides for CDK2 (P24941 ) (see all 25 )CDK2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001789.2 NP_439892.2 ENSEMBL proteins: ENSP00000266970 ENSP00000450983 ENSP00000452514 ENSP00000393605 ENSP00000452138 ENSP00000243067 Reactome Protein details: P24941 Human Recombinant Protein Products: Gene Ontology (GO): 5/13 cellular component terms (GO ID links to tree view) (see all 13 ): About this table
CDK2 for ontologies About GeneDecksing CDK2 Antibody Products: Assay Products for CDK2:
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Protein
Domains / Familiesfor CDK2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CDK2 for domains About GeneDecksing 5 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P24941 ProtoNet protein and cluster: P24941
UniProtKB/Swiss-Prot: CDK2_HUMAN, P24941 Similarity : Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamilySimilarity : Contains 1 protein kinase domain
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Functionfor CDK2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: CDK2_HUMAN, P24941 Function : Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, butdispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme regulation : Phosphorylation at Thr-14 or Tyr-15 inactivates the enzyme, while phosphorylation at Thr-160activates it. Inhibited by 1,25-dihydroxyvitamin D(3) (1,25-(OH)(2)D(3)), AG-024322, N-(4-Piperidinyl)-4-(2,6-dichlorobenzoylamino)-1H-pyrazole-3-carboxamide (AT7519), R547 (Ro-4584820), purine, pyrimidine and pyridine derivatives, 2-aminopyrimidines, paullones, thiazo derivatives, macrocyclic quinoxalin-2-one, pyrazolo[1,5-a]-1,3,5-triazine, pyrazolo[1,5-a]pyrimidine, 2-(1-ethyl-2-hydroxyethylamino)-6-benzylamino-9-isopropylpurine (roscovitine, seliciclib and CYC202), SNS-032 (BMS-387032), triazolo[1,5-a]pyrimidines, staurosporine and olomoucine. Stimulated by MYC. Inactivated by CDKN1A (p21) Induction : Induced transiently by TGFB1 at an early phase of TGFB1-mediated apoptosis
Genatlas biochemistry entry for CDK2 : cyclin dependent kinase 2,involved in cell cycle regulation (G1 to S transition),complexing with cyclin E for the regulation of chromosome stability,activated in apoptosis by TP53 regulated,BAX and BCL2,putative checkpoint between cell cycle and cell death pathway Enzyme Numbers (IUBMB): EC 2.7.11.22 1 2 EC 2.7.11 2 Inhib. RNA Products: EMD Millipore RNAi Products for the Analysis of CDK2 Gene knock-down OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CDK2 (see all 7 ) OriGene shRNA RFP: CDK2 OriGene siRNA: CDK2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CDK2
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): CDK2 (NM_052827 ) Sino Biological Human cDNA Clone for CDK2 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CDK2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CDK2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CDK2
Gene Ontology (GO): 5/9 molecular function terms (GO ID links to tree view) (see all 9 ): About this table
CDK2 for ontologies About GeneDecksing 4 GenomeRNAi human phenotypes for CDK2 :Animal Models: Mouse knock-outs for CDK2: Cdk2 tm1Kald Cdk2 tm1Sgo 15 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Cdk2) :
CDK2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor CDK2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/63 super-pathways (see all 63 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Ubiquitinated Orc1 is degraded by the proteasome 2 Cell cycle_Cell cycle (generic schema) 3 Cyclins and Cell Cycle Regulation 4 Chks in Checkpoint Regulation 5 Cell cycle
Pathway sources See GeneCards unified pathways Show all pathways 5/13 EMD Millipore Pathways for CDK2 (see all 13 )5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CDK2 (see all 15 )1
Cell Signaling Technology (CST) Pathway for CDK2 5/11 GeneGo (Thomson Reuters) Pathways for CDK2 (see all 11 )5/26 BioSystems Pathways for CDK2 (see all 26 ) 5/38
Reactome Pathways for CDK2 (see all 38 )5/8
Kegg Pathways (Kegg details for CDK2) (see all 8 ):
CDK2 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CDK2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/302 Interacting proteins for CDK2 (P24941 1 , 2 , 3 ENSP00000266970 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 302 )Interactant Interaction Details GeneCard External ID(s) CDKN1A P38936 1 , 2 , 3 , ENSP00000244741 4 EBI-375096,EBI-375077 MINT-2635357 MINT-73323 MINT-3370697 MINT-50415 I2D:
score=13 STRING: ENSP00000244741 CDKN3 Q16667 1 , 2 , 3 , ENSP00000335357 4 EBI-375096,EBI-1031527 MINT-17387 MINT-17388 MINT-24981 I2D:
score=6 STRING: ENSP00000335357 CDKN1B P46527 1 , 2 , 3 , ENSP00000228872 4 EBI-375096,EBI-519280 MINT-3379700 I2D:
score=8 STRING: ENSP00000228872 CCNA2 P20248 1 , 3 , ENSP00000274026 4 EBI-375096,EBI-457097 I2D:
score=9 STRING: ENSP00000274026 CCNE2 O96020 1 , 3 , ENSP00000309181 4 EBI-375096,EBI-375033 I2D:
score=6 STRING: ENSP00000309181
About this table Gene Ontology (GO): 5/30 biological process terms (GO ID links to tree view) (see all 30 ): About this table
CDK2 for ontologies About GeneDecksing
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Drugs & Compoundsfor CDK2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CDK2 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for CDK2
Compounds for CDK2 available from Tocris Bioscience About this table Compound Action
CAS
# SU 9516 Potent cdk2 inhibitor [377090-84-1] Ro 3306 Cyclin-dependent kinase (cdk) 1 inhibitor [872573-93-8] Purvalanol A Cyclin-dependent kinase inhibitor [212844-53-6] Purvalanol B Cyclin-dependent kinase inhibitor [212844-54-7] Olomoucine Cyclin-dependent kinase inhibitor [101622-51-9] NU 2058 Cdk1 and cdk2 inhibitor [161058-83-9]
2 HMDB Compounds for CDK2 About this table 10/135 DrugBank Compounds for CDK2 (see all 135 ) About this table 10/158 Novoseek chemical compound relationships for CDK2 gene (see all 158 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
roscovitine
89.5
102
9030780 (4), 9288122 (4), 9841966 (3), 16575928 (3) (see all 66 )
olomoucine
86.5
42
9288122 (4), 9841966 (3), 10234573 (3), 11896531 (2) (see all 25 )
nu2058
82
16
19426695 (6), 17599054 (2), 10956187 (1), 14657672 (1)
fascaplysin
80.2
2
16750360 (1), 10973815 (1)
flavopiridol
78.8
26
8674031 (3), 15185335 (2), 11289134 (2), 12852762 (2) (see all 19 )
nu6102
78
3
15928920 (2), 19426695 (1)
su9516
77.4
11
12234612 (4), 11507069 (2), 14550307 (2), 12749903 (1)
7-hydroxystaurosporine
71
3
10665655 (1), 15715961 (1), 12181445 (1)
purvalanol
67.7
4
16168436 (1), 16733081 (1), 16140252 (1)
aminopurvalanol
66.6
1
10220373 (1)
Search CenterWatch for drugs/clinical trials and news about CDK2
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Transcriptsfor CDK2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CDK2 gene (2 alternative transcripts): NM_001798.3 NM_052827.2 Unigene Cluster for CDK2:
Cyclin-dependent kinase 2 Hs.19192 [show with all ESTs ] Unigene Representative Sequence: NM_001798 12 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000266970 (uc001sit.4 uc001siu.4 uc010spy.2 ) ENST00000556464 ENST00000555408 ENST00000553376 ENST00000440311 ENST00000555357 ENST00000354056 ENST00000554619 ENST00000556276 ENST00000556656 ENST00000556146 ENST00000554545 Inhib. RNA Products: EMD Millipore RNAi Products for the Analysis of CDK2 Gene knock-down OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CDK2 (see all 7 ) OriGene shRNA RFP: CDK2 OriGene siRNA: CDK2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CDK2
Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 (see all 5 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): CDK2 (NM_052827 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CDK2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CDK2
Additional cDNA sequence: AB012305.1 AK291941.1 AK293246.1 BC003065.2 BT006821.1 M68520.1 X61622.1 X62071.1
15 DOTS entries : DT.95327485 DT.92441495
DT.99990963 DT.313922 DT.91866813 DT.95107346 DT.95326857 DT.100893294 DT.121208040 DT.92441489 DT.92441490 DT.92436457 DT.95190554 DT.97862514 DT.75102502 24/232 AceView cDNA sequences (see all 232 ):
BQ215672 BQ220088 BQ217507 BQ049334 AU119029 BQ421647 AU139504 CB112879 BX343446 BX324447 AA463909 BQ218421 BU172812 BI093689 BQ434863 CR610978 BX336328 AL121503 BU174856 AA810989 BQ230342 AU131320 BX397060 CB129784 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for CDK2 (see all 7 ) About this scheme ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 SP1 :         -   -   -   -                   SP2 :         -   -   -   -         -           SP3 :               -                   SP4 :         -   -   -   -         -           SP5 :             -   -                  
ECgene alternative splicing isoforms for CDK2
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Expression for CDK2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CDK2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TGCACCTTGG
About this image CDK2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Testis Seminiferous Tubules Secondary Spermatocyte Germ Cells, Male Gametocytes Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See CDK2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CDK2 SOURCE GeneReport for Unigene cluster: Hs.19192 SABiosciences Expression via Pathway-Focused PCR Arrays including CDK2 (see all 9 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CDK2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CDK2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CDK2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CDK2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CDK2
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Orthologsfor CDK2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for CDK2 gene from 9/35 species (see all 35 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
CDK21
cyclin-dependent kinase 2
79.75(n) 93.29(a)
 
100529062 NM_001199857.1 NP_001186786.1
lizard (Anolis carolinensis)
Reptilia
CDK26
--
92(a)
1 ↔ 1
GL343198.1(3371965-3384039)
African clawed frog (Xenopus laevis)
Amphibia
Xl.42272
X. laevis Eg1 mRNA for serine/threonine kinase (cdc2) more
78.65(n)
 
X14227.1
zebrafish (Danio rerio)
Actinopterygii
Dr.178832
Danio rerio cDNA clone MGC56598 IMAGE5915295, complete more
76.04(n)
 
BC049499.1
fruit fly (Drosophila melanogaster)
Insecta
cdc23 cdc2c1
G2/M transition of mitotic cell cycle protein more 3 CG10498-PA1
64(a) (best of 3)3 62.81(n) 1 65.65(a) 1
 
31D113 42453 1 NM_001170195.1 1 NP_001163666.1 1
worm (Caenorhabditis elegans)
Secernentea
cdk-13
serine/threonine kinase (CDC2/CDKX subfamily)
60(a) (best of 3)
 
III(9819189-9820383) --
baker's yeast (Saccharomyces cerevisiae)
Saccharomycetes
CDC28(YBR160W)4 CDC281
Catalytic subunit of the main cell cycle cyclin-dependent more 4 Cdc28p1
61.37(n) 1 65.37(a) 1
 
2(560078-560974) 4 852457 1, 4 NP_009718.3 1 NP_009718.1 4
thale cress (Arabidopsis thaliana)
eudicotyledons
CDC21
cyclin-dependent kinase A-1
63.21(n) 68.86(a)
 
824036 NM_114734.3 NP_566911.1
rice (Oryza sativa)
Liliopsida
Os.34282
O.sativa Rcdc2-2 gene for p34-cdc2 protein kinase
77.16(n)
 
AK101344.1
ENSEMBL Gene Tree for CDK2 (if available)TreeFam Gene Tree for CDK2 (if available)
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Paralogsfor CDK2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CDK2 gene CDK6 2 CDK18 2 CDK5 2 CDK15 2 CDK4 2 CDK1 2 CDK3 2 CDK14 2 CDK16 2 CDK17 2 18/81 SIMAP similar genes for CDK2 using alignment to 4 protein entries: CDK2_HUMAN (see all proteins )
(see all similar genes ):CDK3 MAP4K2 MAP4K3 MAP4K5 STK4 CDK18 CDK1 CDC2 STK11 CDK17 CDKL4 CDK11A CDK16 CDK14 CDK11B CDC2L1 DKFZp686L20222 CDKL1
CDK2 for paralogs About GeneDecksing
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Genomic Variantsfor CDK2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 12 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CDK2 (56360553 - 56366568 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CDK2: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CDK2
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Disorders
/ Diseasesfor CDK2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CDK2 for disorders About GeneDecksing
OMIM gene information: 116953
OMIM disorders : --20/134 diseases for CDK2 (see all 134 ): About MalaCards leukemia malignant peripheral nerve sheath tumor melanoma smooth muscle tumor diffuse large b-cell lymphoma human t-cell leukemia virus type 1 cervical intraepithelial neoplasia dna topoisomerase ii non-small cell lung carcinoma adenomatous polyposis coli b-cell lymphomas germ cell tumor laryngeal squamous cell carcinoma anaplastic large cell lymphoma testicular germ cell tumor male germ cell tumor clear cell renal cell carcinoma non-hodgkin lymphoma squamous cell carcinoma pemphigus vulgaris 4 diseases from the University of Copenhagen DISEASES database for CDK2 :Retinoblastoma Breast cancer Carcinoma Leukemia 10/94 Novoseek disease relationships for CDK2 gene (see all 94 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
retinoblastoma
89.6
154
7954429 (2), 9103470 (2), 16824683 (2), 9492054 (2) (see all 99 )
cancer
66.2
103
20423616 (4), 12888290 (2), 16740735 (2), 19525400 (2) (see all 72 )
tumors
61.5
155
11585414 (4), 11299721 (3), 12352662 (3), 10995786 (2) (see all 99 )
breast cancer
53.6
77
8867812 (3), 20010939 (3), 17671085 (3), 10995786 (2) (see all 46 )
colon cancer
50.1
4
12920809 (1), 15763423 (1), 10216486 (1), 12676582 (1)
prostate cancer
48.7
22
20147522 (3), 9492054 (2), 12954644 (2), 11062725 (1) (see all 12 )
prostate carcinoma
47
3
9794232 (1), 11052627 (1), 12352461 (1)
colon carcinoma
41
3
7601562 (1), 12234612 (1), 11052627 (1)
carcinoma squamous cell
35.5
15
11710944 (2), 10390005 (2), 11267947 (1), 11676482 (1) (see all 12 )
pancreatic cancer
35.5
5
9841966 (1), 11376563 (1), 15084985 (1), 19639215 (1) (see all 5 )
Human Genome Epidemiology (HuGE) Navigator: CDK2 (14 documents) Tumor Gene Database (TGDB) : CDK2 Export disorders for CDK2 gene to outside databases
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Publicationsfor CDK2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CDK2 gene, integrated from 9 sources (see all 1852 ): (articles sorted by number of sources associating them with CDK2) Utopia : connect your pdf to the dynamic world of online information
Cloning of a human cDNA encoding a CDC2-related kinase by complementation of a budding yeast cdc28 mutation. (PubMed id 1717994) 1 , 2 , 3, 9 Ninomiya-Tsuji J.... Matsumoto K. (1991) Nuclear targeting of cyclin-dependent kinase 2 reveal s essential roles of cyclin-dependent kinase 2 localization and cyclin E in vit amin D-mediated growth inhibition. (PubMed id 20147522) 1 , 2 , 9 Flores O....Burnstein K.L. (2010) Cell cycle regulation of CDK2 activity by phosphorylation of Thr160 and Tyr15. (PubMed id 1396589) 1 , 2 , 9 Gu Y.... O'Morgan D.O. (1992) Reciprocal activation by cyclin-dependent kinases 2 and 7 is directed by substrate specificity determinants outside the T loop. (PubMed id 11113184) 1 , 2 , 9 Garrett S....Fisher R.P. (2001) High-resolution crystal structures of human cyclin-dependent kinase 2 with and without ATP: bound waters and natural ligand as guides for inhibitor design. (PubMed id 8917641) 1 , 2 , 9 Schulze-Gahmen U.... Kim S.-H. (1996) Chromosomal mapping of human CDK2, CDK4, and CDK5 cel l cycle kinase genes. (PubMed id 8275715) 1 , 3, 9 Demetrick D.J....Beach D.H. (1994) Cdk2 nitrosylation and loss of mitochondrial potentia l mediate NO-dependent biphasic effect on HL-60 cell cycle. (PubMed id 20079829) 1 , 2 , 9 Kumar S....Dikshit M. (2010) Cyclin B and cyclin A confer different substrate recognition properties on CDK2. (PubMed id 17495531) 1 , 2 , 9 Brown N.R....Johnson L.N. (2007) Cdk phosphorylation triggers sequential intramolecular interactions that progressively block Rb functions as cells move through G1. (PubMed id 10499802) 1 , 2 , 9 Harbour J.W....Dean D.C. (1999) Phosphorylation by Cdk2 is required for Myc to repres s Ras-induced senescence in cotransformation. (PubMed id 19966300) 1 , 2 , 9 Hydbring P....Larsson L.G. (2010)
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External Searches for CDK2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CDK2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing CDK2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing CDK2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for CDK2 gene: Search GeneIP for patents involving CDK2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CDK2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for CDK2 OriGene shRNA RFP for CDK2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CDK2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CDK2 OriGene Protein Over-expression Lysate for CDK2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CDK2 OriGene 3'-UTR Clone for CDK2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CDK2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for CDK2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CDK2 OriGene Custom Protein Services for CDK2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CDK2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CDK2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat CDK2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CDK2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CDK2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CDK2
Antibodies & Assays for CDK2  
Tocris compounds for CDK2
Recombinant Protein for CDK2
CDK2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CDK2
ThermoFisher Antibody for CDK2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CDK2
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