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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CDK11B Gene

protein-coding   GIFtS: 52
GCID: GC01M001574

cyclin-dependent kinase 11B

(Previous name: cell division cycle 2-like 1 (PITSLRE proteins) )
(Previous symbol: CDC2L1)
 Explore 11 diseases affiliated with
CDK11B via our new
 Human Malady Compendium 
Biological research products
for CDK11B
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cyclin-Dependent Kinase 11B1 2     PITSLREA2 3
CDC2L11 2 3 5     PK582 3
CDK112 3 5     P58 CLK-12 3
CDK11-P1101     PITSLRE Serine/Threonine-Protein Kinase CDC2L12 3
CDK11-P461     EC 2.7.11.223 8
CDK11-P581     CDC-Related Protein Kinase P582
Cell Division Cycle 2-Like 1 (PITSLRE Proteins)1 2     P585
Cell Division Cycle 2-Like Protein Kinase 12 3     P58CDC2L11
Cell Division Protein Kinase 11B2 3     P58CLK-11
Galactosyltransferase-Associated Protein Kinase P58/GTA2 3     P585
CLK-12 3     EC 2.7.118

External Ids:    HGNC: 17291   Entrez Gene: 9842   Ensembl: ENSG000002483337   OMIM: 1768735   UniProtKB: P211273   

Export aliases for CDK11B gene to outside databases

Previous GC identifers: GC01M001628 GC01M001572


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CDK11B:
This gene encodes a member of the p34Cdc2 protein kinase family. p34Cdc2 kinase family members are known to be
essential for eukaryotic cell cycle control. This gene is in close proximity to CDC2L2, a nearly identical gene in the
same chromosomal region. The gene loci including this gene, CDC2L2, as well as metalloprotease MMP21/22, consist of
two identical, tandemly linked genomic regions which are thought to be a part of the larger region that has been
duplicated. This gene and CDC2L2 were shown to be deleted or altered frequently in neuroblastoma with amplified MYCN
genes. The protein kinase encoded by this gene could be cleaved by caspases and was demonstrated to play roles in cell
apoptosis. Several alternatively spliced variants of this gene have been reported. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: CD11B_HUMAN, P21127
Function: Appears to play multiple roles in cell cycle progression, cytokinesis and apoptosis. The p110 isoforms have
been suggested to be involved in pre-mRNA splicing, potentially by phosphorylating the splicing protein SFRS7. The p58
isoform may act as a negative regulator of normal cell cycle progression

Gene Wiki entry for CDK11B (CDC2L1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004350.19  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for CDK11B
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for CDK11B

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CDK11B


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p36.33   Ensembl cytogenetic band:  1p36.33   HGNC cytogenetic band: 1p36.33

CDK11B Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CDK11B gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M001574:  view genomic region     (about GC identifiers)

Start:
1,570,603 bp from pter      End:
1,590,473 bp from pter
Size:
19,871 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CD11B_HUMAN, P21127 (See protein sequence)
Recommended Name: Cyclin-dependent kinase 11B  
Size: 795 amino acids; 92707 Da
Cofactor: Magnesium
Subunit: The cleaved p110 isoform, p110C, binds to the serine/threonine kinase PAK1 and RANBP9. p110C interacts with
RNPS1. The p58 isoform but not the p110 isoforms or p110C interacts with CCND3. The p110 isoforms are found in large
molecular weight complexes containing CCNL1 and SFRS7
Subcellular location: Cytoplasm. Nucleus
Miscellaneous: Duplicated gene. CDK11A and CDK11B encode almost identical protein kinases of 110 kDa that contain at
their C-termini the open reading frame of a smaller 58 kDa isoform which is expressed following IRES-mediated
alternative initiation of translation
Caution: Many references talk about 'p110 isoforms' but it is not yet known if this refers to CDK11A and/or CDK11B or
one/some of the isoforms of each
Sequence caution: Sequence=AAC83664.1; Type=Erroneous gene model prediction; Sequence=AAF36538.1; Type=Erroneous
initiation;
Secondary accessions: O95265 Q12817 Q12818 Q12819 Q12820 Q12822 Q8N530 Q9NZS5 Q9UBJ0 Q9UBQ1 Q9UBR0
Q9UNY2 Q9UP57 Q9UP58 Q9UP59
Alternative splicing, Alternative initiation: 10 isoforms:  P21127-1   P21127-2   P21127-3   P21127-4   P21127-5   P21127-6   P21127-8   P21127-9   
P21127-10   P21127-12   (Produced by alternative initiation at Met-357 of isoform SV9)

Explore the universe of human proteins at neXtProt for CDK11B: NX_P21127

Post-translational modifications:

  • During apoptosis, induced by Fas or tumor necrosis factor, specific CKD11 p110 isoforms are cleaved by caspases to
  • produce a protein (p110C) that contains the C-terminal kinase domain of the CDK11 proteins1
  • Phosphorylation at Ser-115 creates a binding site for 14-3-3 proteins. p110C can be autophosphorylated1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P21127

  • 4/13 DME Specific Peptides for CDK11B (P21127) (see all 13)
     VKRGTSP  ILHRDLK  EQLERKR  VVTLWYR 

    CDK11B Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (6 alternative transcripts): 
    NP_277021.1  NP_277022.1  NP_277023.1  NP_277024.1  NP_277027.1  NP_277028.1  

    ENSEMBL proteins: 
     ENSP00000463404   ENSP00000344418   ENSP00000464036   ENSP00000463200   ENSP00000464016  
     ENSP00000463048  
    Reactome Protein details: P21127
    Human Recombinant Protein Products: 
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    Uscn Proteins for CDK11B

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005737cytoplasm IDA--


    CDK11B for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CDK11B for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR000719 Prot_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry P21127

    ProtoNet protein and cluster: P21127

    UniProtKB/Swiss-Prot: CD11B_HUMAN, P21127
    Similarity: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: CD11B_HUMAN, P21127
    Function: Appears to play multiple roles in cell cycle progression, cytokinesis and apoptosis. The p110 isoforms have
    been suggested to be involved in pre-mRNA splicing, potentially by phosphorylating the splicing protein SFRS7. The p58
    isoform may act as a negative regulator of normal cell cycle progression
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Phosphorylation at Thr-448 or Tyr-449 inactivates the enzyme, while phosphorylation at Thr-595
    activates it (By similarity)
    Induction: The p58 isoform is specifically induced in G2/M phase of the cell cycle

    Enzyme Numbers (IUBMB): EC 2.7.11.221 2 EC 2.7.112

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    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004672protein kinase activity TAS8195233
    GO:0004674protein serine/threonine kinase activity IDA12501247
    GO:0004693cyclin-dependent protein kinase activity IEA--
    GO:0005515protein binding IPI12624090
    GO:0005524ATP binding IDA12501247


    CDK11B for ontologies           About GeneDecksing


    6 GenomeRNAi human phenotypes for CDK11B:
     Decreased substrate adherent c  Decreased viability  Increased apoptosis  Increased circadian period len 
     Increased viability with 4OH t  Weaker migration 

    Animal Models:
         Mouse knock-out Cdk11btm1Vjk for CDK11B
         5 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Cdk11b):
     cellular  embryogenesis  integument  mortality/aging  tumorigenesis 

    CDK11B for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Recruitment of mitotic centrosome proteins and complexes
    Centrosome maturation1.00
    G2/M Transition0.83
    Recruitment of mitotic centrosome proteins and complexes1.00
    Mitotic G2-G2/M phases0.81
    2Cell Cycle
    Cell Cycle1.00
    Cell Cycle, Mitotic0.84
    3Cell Cycle / Checkpoint Control
    Cell Cycle / Checkpoint Control1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 Cell Signaling Technology (CST) Pathway for CDK11B
        Cell Cycle / Checkpoint Control

    5/6        Reactome Pathways for CDK11B (see all 6)
        Centrosome maturation
    G2/M Transition
    Cell Cycle
    Recruitment of mitotic centrosome proteins and complexes
    Mitotic G2-G2/M phases



    CDK11B for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CDK11B

    5/24 Interacting proteins for CDK11B (P211271, 2, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 24)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PAK1Q131531, 2, 3EBI-1298,EBI-1307 MINT-1771821 I2D: score=3 
    KAT7O952512, 3MINT-62237 MINT-62238 MINT-62239 MINT-62236 MINT-62240 MINT-62241 I2D: score=2 
    EIF3FO003032, 3MINT-6948862 MINT-6948836 MINT-6948849 I2D: score=1 
    URM1Q9BTM92, 3MINT-63553 I2D: score=3 
    CCND3P302813I2D: score=2 
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001558regulation of cell growth IEP10882096
    GO:0001824blastocyst development ----
    GO:0006355regulation of transcription, DNA-dependent NAS9750192
    GO:0006468protein phosphorylation IDA12501247
    GO:0006915apoptotic process NAS9750192


    CDK11B for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CDK11B for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    3 HMDB Compounds for CDK11B    About this table
    CompoundSynonyms CAS #PubMed Ids
    ADPadenosindiphosphorsaeure (see all 8)58-64-0--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    MagnesiumMagnesium (see all 2)7439-95-4--
    Search CenterWatch for drugs/clinical trials and news about CDK11B / CD11B 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CDK11B gene (8 alternative transcripts): 
    NM_033486.1  NM_033487.1  NM_033488.1  NM_033489.1  NM_033492.1  NM_033493.1  NM_001787.1  NM_033490.1  

    Unigene Cluster for CDK11B:

    Cyclin-dependent kinase 11B
    Hs.709182  [show with all ESTs]
    Unigene Representative Sequence: AK000081
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000513088 ENST00000341028(uc001ahc.1) ENST00000407249 ENST00000317673
    ENST00000340677 ENST00000341832(uc009vkj.2 uc010nyr.1 uc001ags.1 uc001agt.1 uc001aha.1 uc001agw.1 uc001agv.1 uc001agy.1 uc001agx.1 uc001agz.1)


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    Additional cDNA sequence: 

    AF067512.1 AF067513.1 AF067514.1 AF067515.1 AF067516.1 AF174497.1 AK000081.1 AK295607.1 
    AK301495.1 AK303446.1 AK303451.1 AK304679.1 BC009375.2 BC062579.1 BC139777.1 BC140714.1 
    BC171773.1 U04816.1 U04817.1 U04818.1 U04824.1 

    24/32 DOTS entries (see all 32):

    DT.40308783  DT.92453672  DT.95224500  DT.75133401  DT.92453679  DT.92453688  DT.100887081  DT.91946997 
    DT.100887093  DT.100887090  DT.121399105  DT.121399199  DT.100887079  DT.100887091  DT.99977005  DT.121399213 
    DT.121643403  DT.92453670  DT.100044908  DT.40105999  DT.40223002  DT.101985235  DT.92453681  DT.95224492 

    24/499 AceView cDNA sequences (see all 499):

    BF589317 BI753229 AA159745 AL519809 BQ717326 CK823856 BE047587 NM_182838 
    BE328002 AL043340 CK429285 AI263381 AW662168 AA300538 BM761686 BX646365 
    AI066775 CR606630 BF058069 BQ045355 BF868528 AW292671 BC014464 CB161273 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CDK11B expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See CDK11B Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CDK11B

    SOURCE GeneReport for Unigene cluster: Hs.709182

    UniProtKB/Swiss-Prot: CD11B_HUMAN, P21127
    Tissue specificity: Expressed ubiquitously. Some evidence of isoform-specific tissue distribution

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CDK11B gene from 8/34 species (see all 34)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CDC2L11 cell division cycle 2-like 1 (PITSLRE proteins) 77.94(n)
    93.37(a)
      419406  NM_001030871.2  NP_001026042.1 
    lizard
    (Anolis carolinensis)
    Reptilia CDK11A6
    --
    93(a)
    1 → many
    GL344966.1(2083-13920)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.238882 Xenopus laevis transcribed sequence with strong similarity more 76.01(n)    BU916896.1 
    zebrafish
    (Danio rerio)
    Actinopterygii CA472942.12   -- 83.33(n)    CA472942.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Pitslre1 CG4268-PA 53.27(n)
    49.51(a)
      40292  NM_168869.2  NP_730563.1 
    worm
    (Caenorhabditis elegans)
    Secernentea B0495.21 Protein B0495.2 47.65(n)
    42.25(a)
      174244  NM_063216.4  NP_495617.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT1G675801 protein kinase-like protein 55.51(n)
    57.05(a)
      843079  NM_105425.4  NP_176925.1 
    rice
    (Oryza sativa)
    Liliopsida Os.118892 Oryza sativa (japonica cultivar-group) cDNA cloneJ more 69.42(n)    AK111593.1 


    ENSEMBL Gene Tree for CDK11B (if available)
    TreeFam Gene Tree for CDK11B (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CDK11B gene
    CDK11A1 2  CDK102  
    18/60 SIMAP similar genes for CDK11B using alignment to 6 protein entries:     CD11B_HUMAN (see all proteins) (see all similar genes):
    CDC2L2    CDC2L1    CDK11A    DYRK4    NDUFA9    CDK10
    CDC2    PHKG2    CDK1    CDK3    CDK5    CDK6
    DKFZp686L20222    NEK9    CDK2    CDK7    CDK9    CDK4

    CDK11B for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for CDK11B
    PGOHUM00000247147


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/21 NCBI SNPs in CDK11B are shown (see all 21    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs617749081,2
    --842034(+) ACGGCC/TGCCTC 6 -- int12Minor allele frequency- T:0.21NA EA 122
    rs1130036351,2
    --842906(+) ATCCCT/CTCCCA 6 -- int11Minor allele frequency- C:0.00CSA 1
    rs763763511,2
    F,--843147(+) CTCTTC/TGCTCC 6 -- int11Minor allele frequency- T:0.09WA 118
    rs287589251,2
    C--843328(+) CCCCAC/TCACAC 6 -- int12Minor allele frequency- T:0.00NA 4
    rs38199951,2
    C--849975(+) TCACAT/CAGTCG 6 -- int12Minor allele frequency- C:0.25NA 4
    rs38200011,2
    C--855933(+) GTTCAC/GGCGTC 6 -- int11Minor allele frequency- G:0.00NA 2
    rs38200021,2
    C,--855970(+) TCTGCC/TAGGTC 6 -- int12Minor allele frequency- T:0.00NA 4
    rs343192881,2
    --865700(+) AAAAA-/ATATGG 6 -- int10--------
    rs716309361,2
    C,F--868655(+) AGCTCC/TGCCAC 6 -- us2k12Minor allele frequency- T:0.50NA 4
    rs617767631,2
    C--868665(+) CCCGGG/ATTCAC 6 -- us2k15Minor allele frequency- A:0.00NA 10

    HapMap Linkage Disequilibrium report for CDK11B (1570603 - 1590473 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 16 variations for CDK11B
         13 CNVs: 2042 22925 38832 2295 30362 3276 0002 60788 31596 84001 63709 23342 74286
         3 Indels: 11373 23983 59918

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CDK11B for disorders           About GeneDecksing

    OMIM gene information: 176873    OMIM disorders: --

    11 diseases for CDK11B:    About MalaCards
    endodermal sinus tumor    childhood endodermal sinus tumor    neuroblastoma    non-hodgkin lymphoma
    hodgkin's lymphoma    sinusitis    hepatocellular carcinoma    alzheimer's disease
    melanoma    breast cancer    carcinoma

    2 Novoseek disease relationships for CDK11B gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    melanoma 19.5 2 15344906 (1)
    tumors 0 1 9162192 (1)

    Human Genome Epidemiology (HuGE) Navigator: CDK11B (1 document)

    Export disorders for CDK11B gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CDK11B gene, integrated from 9 sources (see all 74):
    (articles sorted by number of sources associating them with CDK11B)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The cyclin-dependent kinase 11(p46) isoform interacts with RanBPM. (PubMed id 14511641)1, 2, 3 Mikolajczyk M.... Nelson M. (2003)
    2. CDK11 complexes promote pre-mRNA splicing. (PubMed id 12501247)1, 2, 9 Hu D.... Kidd V.J. (2003)
    3. Structure and expression of the human p58clk-1 protein kinase chromosomal gene. (PubMed id 1639388)1, 2, 9 Eipers P.G.... Kidd V.J. (1992)
    4. Cyclin-dependent kinases: a family portrait. (PubMed id 19884882)1, 3 Malumbres M....Wolgemuth D.J. (2009)
    5. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)1, 2 Beausoleil S.A.... Gygi S.P. (2006)
    6. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    7. The cyclin-dependent kinase 11 interacts with 14-3-3 proteins. (PubMed id 15883043)1, 2 Feng Y....Nelson M.A. (2005)
    8. The C-terminal kinase domain of the p34cdc2-related PITSLRE protein kinase (p110C) associates with p21-activated kinase 1 and inhibits its activity during anoikis. (PubMed id 12624090)1, 2 Chen S.... Gu J. (2003)
    9. Identification and characterization of a novel cell cycle-regulated internal ribosome entry site. (PubMed id 10882096)1, 2 Cornelis S....Beyaert R. (2000)
    10. Duplication of a genomic region containing the Cdc2L1-2 and MMP21-22 genes on human chromosome 1p36.3 and their linkage to D1Z2. (PubMed id 9750192)1, 2 Gururajan R....Kidd V.J. (1998)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 984 HGNC: 1729 AceView: CDC2L1andSLC35E2 Ensembl:ENSG00000248333 euGenes: HUgn984
    ECgene: CDK11B H-InvDB: CDK11B

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CDK11B Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CDK11B gene:
    Search GeneIP for patents involving CDK11B

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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