Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CDIPT-AS1 Gene

Subcategory (RNA class) for CDIPT-AS1 Gene


Quality Score for this RNA gene is


Aliases for CDIPT-AS1 Gene

  • CDIPT Antisense RNA 1 (Head To Head) 2 3
  • Putative Uncharacterized Protein LOC440356 3
  • CTD-2574D22.5 3

External Ids for CDIPT-AS1 Gene

ORGUL Members for CDIPT-AS1 Gene

Summaries for CDIPT-AS1 Gene

GeneCards Summary for CDIPT-AS1 Gene

CDIPT-AS1 (CDIPT Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDIPT-AS1 Gene

Genomics for CDIPT-AS1 Gene

Genomic Location for CDIPT-AS1 Gene

29,863,593 bp from pter
29,868,053 bp from pter
4,461 bases
Plus strand

Genomic View for CDIPT-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CDIPT-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDIPT-AS1 Gene

No data available for Regulatory Elements for CDIPT-AS1 Gene

Proteins for CDIPT-AS1 Gene

Post-translational modifications for CDIPT-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDIPT-AS1 Gene

Domains for CDIPT-AS1 Gene

Gene Families for CDIPT-AS1 Gene

  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CDIPT-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDIPT-AS1 Gene

Function for CDIPT-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for CDIPT-AS1 Gene

Localization for CDIPT-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CDIPT-AS1 Gene

Pathways for CDIPT-AS1 Gene

SuperPathways for CDIPT-AS1 Gene

No Data Available

Interacting Proteins for CDIPT-AS1 Gene

Gene Ontology (GO) - Biological Process for CDIPT-AS1 Gene


No data available for Pathways by source for CDIPT-AS1 Gene

Transcripts for CDIPT-AS1 Gene

mRNA/cDNA for CDIPT-AS1 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate CDIPT-AS1
    • Block miRNA regulation of CDIPT-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for CDIPT-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for CDIPT-AS1 Gene

    No ASD Table

    Relevant External Links for CDIPT-AS1 Gene

    GeneLoc Exon Structure for
    ECgene alternative splicing isoforms for

    Expression for CDIPT-AS1 Gene

    mRNA expression in normal human tissues for CDIPT-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for CDIPT-AS1 Gene

    This gene is overexpressed in Testis (41.1).
    genes like me logo Genes that share expressions with CDIPT-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CDIPT-AS1 Gene

    Orthologs for CDIPT-AS1 Gene

    This gene was present in the common ancestor of human and mouse.

    Orthologs for CDIPT-AS1 Gene

    Organism Taxonomy Gene Similarity Type Details
    (Mus musculus)
    Mammalia D830044I16Rik 16
    Species with no ortholog for CDIPT-AS1:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • chimpanzee (Pan troglodytes)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for CDIPT-AS1 Gene

    Gene Tree for CDIPT-AS1 (if available)
    Gene Tree for CDIPT-AS1 (if available)

    Paralogs for CDIPT-AS1 Gene

    No data available for Paralogs for CDIPT-AS1 Gene

    Variants for CDIPT-AS1 Gene

    Sequence variations from dbSNP and Humsavar for CDIPT-AS1 Gene

    SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
    rs4474709 -- 29,866,840(-) TTTTT(A/T)AAATT intron-variant
    rs4787482 -- 29,866,928(+) aaggc(G/T)ggtgg intron-variant
    rs7190671 -- 29,865,717(+) GAGCT(G/T)Cttct intron-variant
    rs7198022 -- 29,867,147(+) ttagc(C/T)gggtt intron-variant
    rs9924348 -- 29,866,228(+) aaTAA(A/T)TTTCC intron-variant

    Relevant External Links for CDIPT-AS1 Gene

    HapMap Linkage Disequilibrium report

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for CDIPT-AS1 Gene

    Disorders for CDIPT-AS1 Gene

    No disorders were found for CDIPT-AS1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CDIPT-AS1 Gene

    Publications for CDIPT-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
    3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3

    Products for CDIPT-AS1 Gene

    Sources for CDIPT-AS1 Gene

    Back to Top