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Aliases for CDC42P3 Gene

Aliases for CDC42P3 Gene

  • Cell Division Cycle 42 Pseudogene 3 2 3 5

External Ids for CDC42P3 Gene

Previous GeneCards Identifiers for CDC42P3 Gene

  • GC08P144078

Summaries for CDC42P3 Gene

GeneCards Summary for CDC42P3 Gene

CDC42P3 (Cell Division Cycle 42 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CDC42P3 Gene

Genomics for CDC42P3 Gene

Regulatory Elements for CDC42P3 Gene

Enhancers for CDC42P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F142990 1.1 FANTOM5 Ensembl ENCODE 0.8 -2.8 -2829 4.4 HDGF ATF1 PKNOX1 ARNT ZNF766 KLF13 MEF2D SMARCA4 PBX2 STAT3 C8orf31 LOC100133669 JRK CYP11B2 ENSG00000253715 LY6D ZNF696 TSNARE1 LYPD2 CDC42P3
GH08F142984 0.5 ENCODE 0.4 -11.6 -11560 0.2 CTCF ZBTB48 GLIS1 SMC3 PRDM10 REST RAD21 CDC42P3 LOC105375794
GH08F142985 0.2 ENCODE 0.4 -11.3 -11300 0.2 CTCF ZBTB48 GLIS1 SMC3 PRDM10 REST RAD21 CDC42P3 LOC105375794
GH08F142968 0.2 ENCODE 0.3 -26.8 -26789 1.0 ZNF263 TAL1 REST EBF1 ARID1B HIC1 CBX1 NCOR1 POLR2A TRIM24 LYNX1 CDC42P3 LOC105375794
GH08F142950 1.1 FANTOM5 ENCODE 0.2 -44.2 -44207 3.0 TFAP4 CBX3 JUN TSC22D4 YBX1 RARA FOSL1 ZNF791 TRIM24 FOS ZNF623 ADGRB1 ENSG00000261710 LYNX1 LOC105375794 CDC42P3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CDC42P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for CDC42P3 Gene

Chromosome:
8
Start:
142,995,828 bp from pter
End:
142,997,663 bp from pter
Size:
1,836 bases
Orientation:
Plus strand

Genomic View for CDC42P3 Gene

Genes around CDC42P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CDC42P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CDC42P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CDC42P3 Gene

Proteins for CDC42P3 Gene

Post-translational modifications for CDC42P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CDC42P3 Gene

Domains & Families for CDC42P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CDC42P3 Gene

Function for CDC42P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CDC42P3 Gene

Localization for CDC42P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CDC42P3 Gene

Pathways & Interactions for CDC42P3 Gene

SuperPathways for CDC42P3 Gene

No Data Available

Interacting Proteins for CDC42P3 Gene

Gene Ontology (GO) - Biological Process for CDC42P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CDC42P3 Gene

Transcripts for CDC42P3 Gene

mRNA/cDNA for CDC42P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CDC42P3 Gene

No ASD Table

Relevant External Links for CDC42P3 Gene

GeneLoc Exon Structure for
CDC42P3
ECgene alternative splicing isoforms for
CDC42P3

Expression for CDC42P3 Gene

mRNA expression in normal human tissues for CDC42P3 Gene

mRNA differential expression in normal tissues according to GTEx for CDC42P3 Gene

This gene is overexpressed in Brain - Cerebellum (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of CDC42P3 Gene:

CDC42P3
genes like me logo Genes that share expression patterns with CDC42P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for CDC42P3 Gene

Orthologs for CDC42P3 Gene

Evolution for CDC42P3 Gene

ENSEMBL:
Gene Tree for CDC42P3 (if available)
TreeFam:
Gene Tree for CDC42P3 (if available)

No data available for Orthologs for CDC42P3 Gene

Paralogs for CDC42P3 Gene

No data available for Paralogs for CDC42P3 Gene

Variants for CDC42P3 Gene

Sequence variations from dbSNP and Humsavar for CDC42P3 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs111593449 -- 142,994,977(+) TCCTG(A/G)GTTCA intron-variant, upstream-variant-2KB
rs111853867 -- 142,996,246(+) TGCTT(-/G)TTGGG intron-variant, nc-transcript-variant
rs112171847 -- 142,996,853(+) TCTTA(A/G)TGTGT intron-variant, nc-transcript-variant
rs112231810 -- 142,997,786(+) CAGCC(C/T)CCCAA intron-variant, downstream-variant-500B
rs112505171 -- 142,997,821(+) CACCA(C/T)GCCCG intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CDC42P3 Gene

Variant ID Type Subtype PubMed ID
nsv971357 CNV duplication 23825009

Relevant External Links for CDC42P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CDC42P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CDC42P3 Gene

Disorders for CDC42P3 Gene

Relevant External Links for CDC42P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CDC42P3

No disorders were found for CDC42P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CDC42P3 Gene

Publications for CDC42P3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for CDC42P3 Gene

Sources for CDC42P3 Gene

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