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Aliases & Descriptions for CD81
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| S5.7 2 | | TAPA-1 1 | | TAPA1 2, 3, 5 | | TSPAN28 1, 2, 3 | | Tetraspanin-28 3 | | Tspan-28 3 |
| | | Descriptions |
|---|
| 26 kDa cell surface protein TAPA-1 2, 3 | | CD81 antigen 2, 3 | | CD81 antigen (target of antiproliferative antibody 1) 1, 2 | | CD81 molecule 2 | | Target of the antiproliferative antibody 1 3 | | target of antiproliferative antibody 1 2 |
|
| | Search outside databases for aliases for CD81 genePrevious GC identifers: GC11P002460 GC11P002599 GC11P002356 GC11P002363 |
Summaries for CD81(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CD81: The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. This encoded protein is a cell surface glycoprotein that is known to complex with integrins. This protein appears to promote muscle cell fusion and support myotube maintenance. Also it may be involved in signal transduction. This gene is localized in the tumor-suppressor gene region and thus it is a candidate gene for malignancies. [provided by RefSeq] UniProtKB/Swiss-Prot: CD81_HUMAN, P60033Function: May play an important role in the regulation of lymphoma cell growth. Interacts with a 16-kDa Leu-13 protein to form a complex possibly involved in signal transduction. May acts a the viral receptor for HCVGene Wiki entry for CD81 |
Genomic Location for CD81
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CD81 gene 
Entrez Gene cytogenetic band: 11p15.5 Ensembl cytogenetic band: 11p15.5 HGNC cytogenetic band: 11pter-p11.2CD81 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P002355:
(about GC identifiers)
Start:
|
2,355,123 bp from pter |
End:
|
2,375,225 bp from pter |
Size:
|
20,103 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000011.8 NT_009237.17
| Proteins for CD81
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CD81_HUMAN, P60033 (See
protein sequence)Recommended Name: CD81 antigen Size: 236 amino acids; 25809 Da
Subunit: Plays a critical role in HCV attachment and/or cell entry by interacting with HCV E1/E2 glycoproteins heterodimer. Interacts directly with IGSF8
Subcellular location: Membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :1G8Q (3D)
 1IV5 (3D)
 2AVZ (3D)
 
Secondary accessions: P18582 Q5U0J6Post-translational modifications:
Not glycosylated (Probable)1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004347.1
ENSEMBL proteins: ENSP00000263645 ENSP00000370424
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CD81: Assays for CD81: | Protein
Domains/ Families for CD81(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P60033
ProtoNet protein and cluster: P60033 UniProtKB/Swiss-Prot: CD81_HUMAN, P60033Similarity: Belongs to the tetraspanin (TM4SF) family | Gene Function for CD81
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004356
Applied Biosystems Silencer® siRNAs for CD81
Sigma-Aldrich siRNA and siRNA Panels for CD81  Sigma-Aldrich shRNA Panels and shRNA for CD81  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004356                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004356                                  untagged cDNA clone in CMV expression vector: NM_004356 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004356
UniProtKB/Swiss-Prot: CD81_HUMAN, P60033Function: May play an important role in the regulation of lymphoma cell growth. Interacts with a 16-kDa Leu-13 protein to form a complex possibly involved in signal transduction. May acts a the viral receptor for HCVGenatlas biochemistry entry for CD81:integral membrane protein (26kDa),associated with CD19,B cell surface molecule,expressed on many cell types,target of an antiproliferative antibody5 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Cd81):
1 Gene Ontology (GO) molecular function term (links to tree view): About this table | Pathways & Interactions for CD81
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for CD81 
5/44 Interacting proteins for CD81 (P600332 ENSP000003704243) via UniProtKB, MINT, and/or STRING (see all 44
)About this table
5/11 Gene Ontology (GO) biological process terms (links to tree view) (see all 11
): About this table
|
Drugs & Compounds for CD81(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CD81 7 Novoseek chemical compound relationships for CD81 gene
About this table
|
Transcripts for CD81(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004356
Sigma-Aldrich siRNA and siRNA Panels for CD81  Sigma-Aldrich shRNA Panels and shRNA for CD81  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004356 REFSEQ mRNAs for CD81 gene: NM_004356.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004356               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004356                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004356                                  untagged cDNA clone in CMV expression vector: NM_004356  Additional cDNA sequence: AB209380.1 BC002978.1 BC093047.1 BT019507.1 BT019508.1 CR593787.1 CR595315.1 CR597052.1 CR597764.1 CR597813.1 CR598183.1 CR598692.1 CR599310.1 CR601869.1 CR604204.1 CR604277.1 CR604916.1 CR605197.1 CR608902.1 CR616730.1 CR617842.1 CR618893.1 CR621738.1 CR622188.1 CR625241.1 M33680.1 24/29 DOTS entries (see all 29
): DT.92453568 DT.100885968 DT.100040647 DT.451059 DT.97864485 DT.95157455 DT.451056 DT.91978911 DT.91689119 DT.120734561 DT.120734601 DT.100769546 DT.100885965 DT.95157374 DT.100885949 DT.100885952 DT.101985222 DT.120734607 DT.121632864 DT.97856641 DT.100885951 DT.100885953 DT.120734553 DT.120734571 24/858 AceView cDNA sequences (see all 858
):BU187454 BE392104 BQ688058 CR604916 AA460973 CF121199 BM823137 CA434584 BM851827 BU848699 CD367805 BM981166 BI759896 BU625142 BI013033 CA418965 BQ691409 BQ883552 AA335633 CA430012 CR617842 BU751874 CR593787 CR622188
highest scoring ESTs for CD81:AI972078 M33680 AA027242 AA037705 AA055991 AA099591 AA132176 AA216044 AA247187 AA251438 Unigene Cluster for CD81: CD81 molecule Hs.54457 [show with all ESTs]Unigene Representative Sequence: AB209380
GeneLoc Exon Structure
5/12 Alternative Splicing Database (ASD) splice patterns (SP) for CD81 (see all 12
)
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | · | 11c | ^ | 12a | · | 12b | · | 12c | ^ | 13 | ^ | 14a | · | 14b | ^ | 15 | ^ | 16a | · | 16b | |
| SP1: | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | - |   | - |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CD81
2 Ensembl transcripts including schematic representations: ENST00000263645
ENST00000381036
|
Expression for CD81
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CD81 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CD81
1 / 2 / 3 4 probe-sets matching CD81 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.54457
Expression variation in blood from EXPOLDB for CD81 UniProtKB/Swiss-Prot: CD81_HUMAN, P60033Tissue specificity: Hematolymphoid, neuroectodermal and mesenchymal tumor cell lines |
Orthologs for CD81
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CD81 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for CD81
ENSEMBL Gene Tree for CD81 | Paralogs for CD81(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CD81 gene
- TSPAN22 CD92
|
SNPs/Variants for CD81(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CD81 (up to first 250kb)
|
Disorders & Mutations for CD81
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 186845
10/15 Novoseek disease relationships for CD81 gene (see all 15
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| hepatitis c |
78.02 |
46 |
12645944 (2), 14722300 (2), 11024134 (2), 11134943 (2) (see all 36) |
| hepatitis c chronic |
57.69 |
9 |
11130883 (2), 16735696 (2), 16623441 (1), 11391542 (1) (see all 7) |
| virus infection |
40.74 |
11 |
11985527 (2), 14722300 (1), 11602742 (1), 17194487 (1) (see all 9) |
| hepatocellular carcinoma |
31.59 |
6 |
11115611 (2), 12210407 (1), 11130883 (1), 16819966 (1) |
| lymphoproliferative disorders |
24.01 |
2 |
17177963 (1), 12558906 (1) |
| immunodeficiency |
12.29 |
2 |
17177963 (1), 15767432 (1) |
| metastasis |
8.92 |
8 |
15698400 (2), 11115611 (2), 18466772 (1), 9597125 (1) |
| hepatitis |
3.59 |
1 |
11130883 (1) |
| necrosis |
0.00 |
2 |
8668914 (1), 18805782 (1) |
| cancer |
0.00 |
4 |
11115611 (2), 9671393 (1), 19211836 (1) |
About this table
Genetic Association Database: CD81 Human Genome Epidemiology Navigator: CD81 (2 documents)
|
Medical News for CD81(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CD81 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/238 PubMed articles for CD81 gene (see all 238
):- TAPA-1, the target of an antiproliferative antibody, defines a new family of transmembrane proteins. (PubMed id 1695320)1, 3, 4 Oren R.... Levy S. (1990)
- Subunit association and conformational flexibility in the head subdomain of human CD81 large extracellular loop. (PubMed id 12437138)1, 3, 4 Kitadokoro K.... Bolognesi M. (2002)
- Cell entry of hepatitis C virus requires a set of co-receptors that include the CD81 tetraspanin and the SR-B1 scavenger receptor. (PubMed id 12913001)1, 3, 4 Bartosch B.... Cosset F.-L. (2003)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- CD81-dependent binding of hepatitis C virus E1E2 heterodimers. (PubMed id 12970454)3, 4 Cocquerel L.... Levy S. (2003)
- Association of low-density lipoprotein receptor polymorphisms and outcome of hepatitis C infection. (PubMed id 12209363)3, 6 Hennig B.J....Hill A.V. (2002)
- CD81 extracellular domain 3D structure: insight into the tetraspanin superfamily structural motifs. (PubMed id 11226150)3, 4 Kitadokoro K.... Bolognesi M. (2001)
- EWI-2 is a major CD9 and CD81 partner and member of a novel Ig protein subfamily. (PubMed id 11504738)3, 4 Stipp C.S.... Hemler M.E. (2001)
- Structure and membrane topology of TAPA-1. (PubMed id 1860863)3, 4 Levy S.... Takahashi S. (1991)
- Genomic organization and chromosomal localization of the TAPA-1 gene. (PubMed id 1650385)2, 3 Andria M.L....Levy S. (1991)
|
Search for CD81
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CD81
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CD81
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CD81(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CD81(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CD81:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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