CD52 Gene
protein-coding GIFtS : 49
GCID: GC01 P026644
CD52 molecule (Previous name: CD52 antigen (CAMPATH-1 antigen) ) (Previous symbol: CDW52 )
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Aliasesfor CD52 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases CD52 Molecule 1 2 CDW52 Antigen (CAMPATH-1 Antigen)2 CDW521 2 3 He53 CD52 Antigen (CAMPATH-1 Antigen)1 2 CDw523 Cambridge Pathology 1 Antigen2 3 HE53 Epididymal Secretory Protein E52 3 He53 Human Epididymis-Specific Protein 52 3 CD52 Antigen3 CAMPATH-1 Antigen2
Export aliases for CD52 gene to outside databases Previous GC identifers: GC01P026329 GC01P026516 GC01P024898
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Summariesfor CD52 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: CD52_HUMAN, P31358 Function : May play a role in carrying and orienting carbohydrate, as well as having a more specific role
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Genomic Viewsfor CD52 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004610.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CD52 gene promoter: GR COUP-TF1 COUP HNF-4alpha2 Evi-1 HNF-4alpha1 COUP-TF GR-alpha NF-kappaB1 Other transcription factors Search SABiosciences Chromatin IP Primers for CD52 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CD52
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1p36 Ensembl cytogenetic band: 1p36.11 HGNC cytogenetic band: 1p36 CD52 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01P026644: view genomic region
(about GC identifiers )
Start:
26,644,411 bp from pter
End:
26,647,014 bp from pter
Size:
2,604 bases
Orientation:
plus strand
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Proteinsfor CD52 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CD52_HUMAN, P31358 (See
protein sequence )Recommended Name: CAMPATH-1 antigen precursor Size : 61 amino acids; 6614 Da
Subcellular location : Cell membrane; Lipid-anchor, GPI-anchor
Secondary accessions : Q5T138 Q9BW46Explore the universe of human proteins at neXtProt for CD52: NX_P31358 CD52 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_001794.2 ENSEMBL proteins: ENSP00000363330 Human Recombinant Protein Products: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
CD52 for ontologies About GeneDecksing CD52 Antibody Products: Assay Products for CD52:
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Protein
Domains / Familiesfor CD52 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CD52 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry P31358 ProtoNet protein and cluster: P31358
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Functionfor CD52 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: CD52_HUMAN, P31358 Function : May play a role in carrying and orienting carbohydrate, as well as having a more specific role
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CD52 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CD52OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CD52 (NM_001803 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CD52 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CD52
1 GenomeRNAi human phenotype for CD52 :Animal Models: Mouse knock-out Cd52 tm1Osb for CD52 1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Cd52) :
CD52 for phenotypes About GeneDecksing
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Pathways & Interactionsfor CD52 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CD52 Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
CD52 for ontologies About GeneDecksing
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Drugs & Compoundsfor CD52 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CD52 for compounds About GeneDecksing Browse Tocris compounds for CD52 1 DrugBank Compound for CD52 About this table 5 Novoseek chemical compound relationships for CD52 gene About this table
Search CenterWatch for drugs/clinical trials and news about CD52
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Transcriptsfor CD52 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CD52 gene: NM_001803.2 Unigene Cluster for CD52:
CD52 molecule Hs.276770 [show with all ESTs ] Unigene Representative Sequence: BQ276596 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000374213 (uc001bmc.3 ) ENST00000492808 (uc009vsg.1 ) ENST00000470468 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CD52 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CD52OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CD52 (NM_001803 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CD52 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CD52
Additional cDNA sequence: AK311554.1 BC000644.2 BT007116.1 CR456874.1 X62466.1 X67699.1
13 DOTS entries : DT.100684959 DT.418763
DT.121392224 DT.100813681 DT.100813686 DT.100813685 DT.121392215 DT.121392198 DT.100813682 DT.121392240 DT.121392272 DT.95349573 DT.100887414 24/133 AceView cDNA sequences (see all 133 ):
AA352820 BG535652 X62466 AL553529 CR616675 AA352719 BM919818 AV714491 AI148019 CR607239 F23564 AL552682 AA335375 BC000644 AA654602 BU740772 AI081982 BM919108 BE043996 AI142305 AA687774 AV715738 BM720065 AA435559 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for CD52 About this scheme ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3a · 3b SP1 :         -       SP2 :       -   -       SP3 :              
ECgene alternative splicing isoforms for CD52
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Expression for CD52 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CD52 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGGGCAACAG
About this image CD52 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Adipose Body Subcutaneous White Adipose Adipose Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See CD52 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CD52 SOURCE GeneReport for Unigene cluster: Hs.276770 SABiosciences Custom PCR Arrays for CD52 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CD52Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse / rat CD52 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CD52 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CD52
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Orthologsfor CD52 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of human and mouse.
Orthologs for CD52 gene from 1 species (see representative species ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Cd525
CD52 antigen
--
 
4 (66.50 cM) 134082448
ENSEMBL Gene Tree for CD52 (if available)TreeFam Gene Tree for CD52 (if available)
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Paralogsfor CD52 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor CD52 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CD52 (26644411 - 26647014 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CD52: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CD52
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Disorders
/ Diseasesfor CD52 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CD52 for disorders About GeneDecksing
OMIM gene information: 114280
OMIM disorders : --20/33 diseases for CD52 (see all 33 ): About MalaCards relapsing-remitting multiple sclerosis paroxysmal nocturnal hemoglobinuria large granular lymphocyte leukemia waldenstrom macroglobulinemia prolymphocytic leukemia non-hodgkin lymphoma autoimmune hemolytic anemia hemolytic anemia demyelinating polyneuropathy t-cell prolymphocytic leukemia hairy cell leukemia hemoglobinuria mantle cell lymphoma multiple sclerosis lymphoid leukemia lymphocytic leukemia macroglobulinemia aplastic anemia hodgkin's lymphoma rheumatoid arthritis 3 diseases from the University of Copenhagen DISEASES database for CD52 :Chronic lymphocytic leukemia Lymphoma Leukopenia 10/11 Novoseek disease relationships for CD52 gene (see all 11 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
cll refractory
73.4
1
15325705 (1)
leukemia lymphocytic chronic
68.2
4
11999566 (1), 17624249 (1), 17960607 (1), 19642457 (1)
lymphoproliferative disorders
57.3
3
11999566 (1), 17624249 (1), 17428002 (1), 16371014 (1)
leukaemia lymphocytic
50.7
2
16371014 (1), 11792397 (1)
lymphoma t-cell
39.7
1
16371014 (1)
lymphoma non-hodgkins
37.2
3
11807632 (1), 9126378 (1), 8027367 (1)
lymphoma
24
3
11999566 (1), 10524207 (1)
autoimmune diseases
21
1
11792397 (1)
multiple sclerosis
15.4
2
8624684 (1), 9345418 (1)
rheumatoid arthritis
15.3
3
7718516 (1), 8707338 (1), 9126378 (1)
Human Genome Epidemiology (HuGE) Navigator: CD52 (1 document)Export disorders for CD52 gene to outside databases
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Publicationsfor CD52 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CD52 gene, integrated from 9 sources (see all 114 ): (articles sorted by number of sources associating them with CD52) Utopia : connect your pdf to the dynamic world of online information
Characterization of the CAMPATH-1 (CDw52) antigen: biochemical analysis and cDNA cloning reveal an unusually small peptide backbone. (PubMed id 1711975) 1 , 2 , 3 Xia M.-Q.... Waldmann H. (1991) A major mRNA of the human epididymal principal cells, HE5, encodes the leucocyte differentiation CDw52 antigen peptide backbone. (PubMed id 8418821) 1 , 2 , 9 Kirchhoff C.... Ivell R. (1993) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Structure of the CAMPATH-1 antigen, a glycosylphosphatidylinositol- anchored glycoprotein which is an exceptionally good target for complement lysis. (PubMed id 7688956) 1 , 2 Xia M.Q.... Waldmann H. (1993) Different levels of CD52 antigen expression evaluated by quantitative fluorescence cytometry are detected on B-lymphocytes, CD 34+ cells and tumor cells of patients with chronic B-cell lymphoproliferative diseases. (PubMed id 17428002) 1 , 9 Klabusay M....Mayer J. (2007) Structure and chromosomal location of mouse and human CD52 genes. (PubMed id 10524207) 1 , 9 Tone M.... Waldmann H. (1999) Cross-linking of the CAMPATH-1 antigen (CD52) triggers activation of normal human T lymphocytes. (PubMed id 7718516) 1 , 9 Rowan W.C....Brett S.J. (1995) Surface and mRNA expression of the CD52 antigen by human eosinophils but not by neutrophils. (PubMed id 8977262) 1 , 9 Elsner J....Kapp A. (1996) The GPI-anchored CD52 antigen of the sperm surface interacts with semenogelin and participates in clot formation and liquefaction of human semen. (PubMed id 17624925) 1 , 9 Flori F....Giovampaola C.D. (2008) CD52 antigen--a review. (PubMed id 11257744) 1 , 9 Domagal/a A. and Kurpisz M. (2001)
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External Searches for CD52 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CD52 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing CD52 gene
(According to HUGE )
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Specialized Databases showing CD52 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for CD52 gene: Search GeneIP for patents involving CD52 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CD52 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for CD52 OriGene shRNA RFP for CD52 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CD52 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CD52 OriGene Protein Over-expression Lysate for CD52 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CD52 OriGene 3'-UTR Clone for CD52 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CD52 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CD52 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for CD52 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CD52 OriGene Custom Protein Services for CD52 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CD52 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CD52 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CD52 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CD52 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CD52 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CD52
Search Tocris compounds for CD52
CD52 Proteins, Antibodies, CLIAs, and ELISAs
ThermoFisher Antibodies for CD52
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CD52
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Aliases for CD52
Databases for CD52
Disorders / Diseases for CD52
Domains / Families for CD52
Drugs / Compounds for CD52
Expression for CD52
Function for CD52
Genomic Views for CD52
Intellectual Property for CD52
Orthologs for CD52
Paralogs for CD52
Pathways / Interactions for CD52
Products for CD52
Proteins for CD52
Publications for CD52
Search Box for CD52
Summaries for CD52
Transcripts for CD52
Variants for CD52
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