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Aliases for CD3G Gene

Aliases for CD3G Gene

  • CD3g Molecule 2 3 5
  • CD3g Antigen, Gamma Polypeptide (TiT3 Complex) 2 3
  • CD3g Molecule, Gamma (CD3-TCR Complex) 2 3
  • T-Cell Receptor T3 Gamma Chain 3 4
  • T3G 3 4
  • T-Cell Antigen Receptor Complex, Gamma Subunit Of T3 3
  • T-Cell Surface Glycoprotein CD3 Gamma Chain 3
  • CD3g Molecule, Epsilon (CD3-TCR Complex) 3
  • CD3g Antigen 4
  • CD3-GAMMA 3
  • IMD17 3

External Ids for CD3G Gene

Previous GeneCards Identifiers for CD3G Gene

  • GC11P120571
  • GC11P119726
  • GC11P118248
  • GC11P117752
  • GC11P117720
  • GC11P114148

Summaries for CD3G Gene

Entrez Gene Summary for CD3G Gene

  • The protein encoded by this gene is the CD3-gamma polypeptide, which together with CD3-epsilon, -delta and -zeta, and the T-cell receptor alpha/beta and gamma/delta heterodimers, forms the T-cell receptor-CD3 complex. This complex plays an important role in coupling antigen recognition to several intracellular signal-transduction pathways. The genes encoding the epsilon, gamma and delta polypeptides are located in the same cluster on chromosome 11. Defects in this gene are associated with T cell immunodeficiency. [provided by RefSeq, Jul 2008]

GeneCards Summary for CD3G Gene

CD3G (CD3g Molecule) is a Protein Coding gene. Diseases associated with CD3G include Immunodeficiency 17, Cd3 Gamma Deficient and Immunodeficiency Due To Defect In Cd3-Gamma. Among its related pathways are CXCR4-mediated signaling events and HTLV-I infection. GO annotations related to this gene include protein heterodimerization activity and receptor signaling complex scaffold activity. An important paralog of this gene is CD3D.

UniProtKB/Swiss-Prot for CD3G Gene

  • The CD3 complex mediates signal transduction.

Gene Wiki entry for CD3G Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CD3G Gene

Genomics for CD3G Gene

Regulatory Elements for CD3G Gene

Enhancers for CD3G Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F118309 1.1 FANTOM5 Ensembl ENCODE 17.5 -28.0 -28008 13.4 HDGF PKNOX1 ATF1 DMAP1 FEZF1 ZNF48 ZNF121 SP5 REST PPARG CD3G CD3D MPZL3 UBE4A KMT2A CD3E ENSG00000255384 HMBS ARCN1 ENSG00000271751
GH11F118184 0.8 Ensembl ENCODE 12.1 -159.1 -159116 1.2 NR2F2 SCN2B SCN4B CD3D CD3G CD3E TMPRSS4 HSPE1P18
GH11F118186 0.6 Ensembl 12.1 -157.3 -157316 0.8 SIX4 PKNOX1 ZNF687 ZHX2 DPF2 RAD21 MBD2 CBX1 CTBP1 GATA3 SCN2B SCN4B CD3D CD3G CD3E TMPRSS4 HSPE1P18
GH11F118204 0.9 Ensembl ENCODE 12 -137.7 -137747 3.3 SIX4 PKNOX1 KLF1 ZMYM3 CTBP1 GATA3 ZFHX2 HSF1 FOS FOSL2 JAML MPZL3 LOC101929133 CD3D CD3G CD3E RNF214 HINFP MPZL2 IFT46
GH11F118210 0.7 Ensembl ENCODE 12 -129.7 -129733 8.4 HDGF ATF1 MLX ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF143 FOS MPZL3 JAML CD3D CD3G CD3E MPZL2 GC11M118201 HSPE1P18
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around CD3G on UCSC Golden Path with GeneCards custom track

Promoters for CD3G Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001772695 784 1801 RAD51 IKZF1 ETV6 MLLT1

Genomic Location for CD3G Gene

Chromosome:
11
Start:
118,344,316 bp from pter
End:
118,355,161 bp from pter
Size:
10,846 bases
Orientation:
Plus strand

Genomic View for CD3G Gene

Genes around CD3G on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CD3G Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CD3G Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CD3G Gene

Proteins for CD3G Gene

  • Protein details for CD3G Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P09693-CD3G_HUMAN
    Recommended name:
    T-cell surface glycoprotein CD3 gamma chain
    Protein Accession:
    P09693
    Secondary Accessions:
    • Q2HIZ6

    Protein attributes for CD3G Gene

    Size:
    182 amino acids
    Molecular mass:
    20469 Da
    Quaternary structure:
    • The TCR/CD3 complex of T-lymphocytes consists of either a TCR alpha/beta or TCR gamma/delta heterodimer coexpressed at the cell surface with the invariant subunits of CD3 labeled gamma, delta, epsilon, zeta, and eta.

    Three dimensional structures from OCA and Proteopedia for CD3G Gene

neXtProt entry for CD3G Gene

Post-translational modifications for CD3G Gene

  • Ubiquitination at Lys 32, Lys 79, Lys 93, Lys 95, Lys 150, and Lys 164
  • Glycosylation at Asn 52 and Asn 92
  • Modification sites at PhosphoSitePlus

Other Protein References for CD3G Gene

No data available for DME Specific Peptides for CD3G Gene

Domains & Families for CD3G Gene

Gene Families for CD3G Gene

Graphical View of Domain Structure for InterPro Entry

P09693

UniProtKB/Swiss-Prot:

CD3G_HUMAN :
  • A di-leucine motif and a tyrosine-based motif are individually sufficient to induce both endocytosis and delivery to lysosomes.
Domain:
  • A di-leucine motif and a tyrosine-based motif are individually sufficient to induce both endocytosis and delivery to lysosomes.
  • Contains 1 Ig-like (immunoglobulin-like) domain.
  • Contains 1 ITAM domain.
genes like me logo Genes that share domains with CD3G: view

Function for CD3G Gene

Molecular function for CD3G Gene

GENATLAS Biochemistry:
cell differentiation antigen CD3G (gp26),,gamma polypeptide (see CD3@),including an alternative splicing product pTAC12,component of the pre-T cell antigen receptor complex
UniProtKB/Swiss-Prot Function:
The CD3 complex mediates signal transduction.

Gene Ontology (GO) - Molecular Function for CD3G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity IMP 12794121
GO:0030159 receptor signaling complex scaffold activity NAS 12794121
GO:0042608 T cell receptor binding NAS 11186279
GO:0046982 protein heterodimerization activity IPI 9485181
genes like me logo Genes that share ontologies with CD3G: view
genes like me logo Genes that share phenotypes with CD3G: view

Human Phenotype Ontology for CD3G Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Models for CD3G Gene

MGI Knock Outs for CD3G:

Animal Model Products

miRNA for CD3G Gene

miRTarBase miRNAs that target CD3G

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for CD3G Gene

Localization for CD3G Gene

Subcellular locations from UniProtKB/Swiss-Prot for CD3G Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CD3G Gene COMPARTMENTS Subcellular localization image for CD3G gene
Compartment Confidence
plasma membrane 5
endoplasmic reticulum 3
extracellular 2
golgi apparatus 2
lysosome 1
mitochondrion 1
vacuole 1

Gene Ontology (GO) - Cellular Components for CD3G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane NAS 9485181
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0042101 T cell receptor complex NAS 9485181
genes like me logo Genes that share ontologies with CD3G: view

Pathways & Interactions for CD3G Gene

genes like me logo Genes that share pathways with CD3G: view

SIGNOR curated interactions for CD3G Gene

Activates:

Gene Ontology (GO) - Biological Process for CD3G Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006461 protein complex assembly NAS 12794121
GO:0007163 establishment or maintenance of cell polarity IMP 12407027
GO:0007166 cell surface receptor signaling pathway IEA,IMP 12407027
GO:0015031 protein transport IMP 12794121
GO:0031295 T cell costimulation TAS --
genes like me logo Genes that share ontologies with CD3G: view

Drugs & Compounds for CD3G Gene

(9) Drugs for CD3G Gene - From: DrugBank, DGIdb, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Muromonab Approved, Investigational Pharma binder, Target 0
ANTI-CD3 MONOCLONAL ANTIBODY Pharma 0
Catumaxomab Pharma Antibody Others 0
MT-103 Pharma 0
MT110 Pharma Others 0
genes like me logo Genes that share compounds with CD3G: view

Transcripts for CD3G Gene

Unigene Clusters for CD3G Gene

CD3g molecule, gamma (CD3-TCR complex):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CD3G Gene

No ASD Table

Relevant External Links for CD3G Gene

GeneLoc Exon Structure for
CD3G
ECgene alternative splicing isoforms for
CD3G

Expression for CD3G Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CD3G Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for CD3G Gene

This gene is overexpressed in Whole Blood (x22.0), Spleen (x7.1), and Small Intestine - Terminal Ileum (x5.8).

Protein differential expression in normal tissues from HIPED for CD3G Gene

This gene is overexpressed in CD4 Tcells (26.1), CD8 Tcells (21.0), Peripheral blood mononuclear cells (9.8), and Lymph node (6.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for CD3G Gene



Protein tissue co-expression partners for CD3G Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CD3G Gene:

CD3G

SOURCE GeneReport for Unigene cluster for CD3G Gene:

Hs.2259
genes like me logo Genes that share expression patterns with CD3G: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for CD3G Gene

Orthologs for CD3G Gene

This gene was present in the common ancestor of chordates.

Orthologs for CD3G Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CD3G 34 35
  • 99.45 (n)
dog
(Canis familiaris)
Mammalia CD3G 34 35
  • 80.77 (n)
cow
(Bos Taurus)
Mammalia CD3G 34 35
  • 80.15 (n)
mouse
(Mus musculus)
Mammalia Cd3g 34 16 35
  • 79.56 (n)
rat
(Rattus norvegicus)
Mammalia Cd3g 34
  • 79.19 (n)
oppossum
(Monodelphis domestica)
Mammalia CD3G 35
  • 54 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia CD3G 35
  • 53 (a)
OneToOne
chicken
(Gallus gallus)
Aves CD3D 35
  • 41 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 31 (a)
OneToMany
Species where no ortholog for CD3G was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CD3G Gene

ENSEMBL:
Gene Tree for CD3G (if available)
TreeFam:
Gene Tree for CD3G (if available)

Paralogs for CD3G Gene

Paralogs for CD3G Gene

(1) SIMAP similar genes for CD3G Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with CD3G: view

Variants for CD3G Gene

Sequence variations from dbSNP and Humsavar for CD3G Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs104894199 Pathogenic 118,344,424(+) CTGAC(A/G)TGGAA upstream-variant-2KB, reference, missense
rs199676861 Pathogenic 118,349,868(+) AAGAT(A/T)AAAAA reference, stop-gained
rs483352927 Pathogenic 118,349,743(+) TTCAG(-/GAAACCACTTGGTTAAG)GTGTA reference, frameshift-variant
rs111684880 -- 118,342,622(+) GAACT(C/T)ATCCA upstream-variant-2KB, utr-variant-5-prime
rs111912761 -- 118,351,918(+) ACAGG(C/G)TGGGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for CD3G Gene

Variant ID Type Subtype PubMed ID
nsv820176 CNV loss 19587683

Variation tolerance for CD3G Gene

Residual Variation Intolerance Score: 70.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 10.80; 91.69% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for CD3G Gene

Human Gene Mutation Database (HGMD)
CD3G
SNPedia medical, phenotypic, and genealogical associations of SNPs for
CD3G

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CD3G Gene

Disorders for CD3G Gene

MalaCards: The human disease database

(10) MalaCards diseases for CD3G Gene - From: OMIM, ClinVar, GeneTests, Orphanet, DISEASES, and GeneCards

- elite association - COSMIC cancer census association via MalaCards
Search CD3G in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

CD3G_HUMAN
  • Immunodeficiency 17 (IMD17) [MIM:615607]: An autosomal recessive primary immunodeficiency characterized by highly variable clinical severity. Some patients have onset of severe recurrent infections in early infancy that may be lethal, whereas others may be only mildly affected or essentially asymptomatic into young adulthood. More severely affected patients may have evidence of autoimmune disease or enteropathy. The immunologic pattern is similar among patients, showing partial T-cell lymphopenia, decreased amounts of the CD3 complex, and impaired proliferative responses to T-cell receptor dependent stimuli. The phenotype in some patients is reminiscent of severe combined immunodeficiency. {ECO:0000269 PubMed:1635567, ECO:0000269 PubMed:17277165}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Genatlas disease for CD3G Gene

immunodeficiency,severe,combined,defect in surface expression of T-cell receptor-CD3 complex and defective signal transduction,through the TCR

Relevant External Links for CD3G

Genetic Association Database (GAD)
CD3G
Human Genome Epidemiology (HuGE) Navigator
CD3G
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
CD3G
genes like me logo Genes that share disorders with CD3G: view

Publications for CD3G Gene

  1. Evaluation of 6 candidate genes on chromosome 11q23 for coeliac disease susceptibility: a case control study. (PMID: 20478055) Brophy K. … McManus R. (BMC Med. Genet. 2010) 3 46 64
  2. Genetic variants at CD28, PRDM1 and CD2/CD58 are associated with rheumatoid arthritis risk. (PMID: 19898481) Raychaudhuri S. … Plenge R.M. (Nat. Genet. 2009) 3 46 64
  3. Progressive loss of CD3 expression after HTLV-I infection results from chromatin remodeling affecting all the CD3 genes and persists despite early viral genes silencing. (PMID: 17822534) Akl H. … Willard-Gallo K.E. (Virol. J. 2007) 3 22 64
  4. Transcriptional regulation of the human CD3 gamma gene: the TATA-less CD3 gamma promoter functions via an initiator and contiguous Sp-binding elements. (PMID: 15879122) Badran B.M. … Willard-Gallo K.E. (J. Immunol. 2005) 3 22 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64

Products for CD3G Gene

Sources for CD3G Gene

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