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CD274 Gene

protein-coding   GIFtS: 57

GC09P005444
CD274 molecule
(Previous names: programmed cell death 1 ligand 1, CD274 antigen )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: PDCD1LG1)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
B7-H 1, 2
B7-H1 3
B7H1 1, 2, 3
MGC142294 2
MGC142296 2
OTTHUMP00000021029 2
PD-L1 1, 2, 3
PDCD1L1 2, 3
PDCD1LG1 2, 3
PDL1 1, 2, 3
Descriptions
B7 homolog 1 3
CD274 antigen 1, 2, 3
CD274 molecule 2
PDCD1 ligand 1 3
Programmed death ligand 1 3
programmed cell death 1 ligand 1 1, 2
External Ids
HGNC: 176351
Entrez Gene: 291262
UniProtKB: Q9NZQ73
Ensembl: ENSG000001202177
Search outside databases for aliases for CD274 gene

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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UniProtKB/Swiss-Prot: PD1L1_HUMAN, Q9NZQ7
Function: Involved in the costimulatory signal, essential for T-cell proliferation and production
of IL10 and IFNG, in an IL2-dependent and a PDCD1-independent manner. Interaction with PDCD1
inhibits T-cell proliferation and cytokine production

Gene Wiki entry for CD274

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the CD274 gene  

Entrez Gene cytogenetic band: 9p24   Ensembl cytogenetic band:  9p24.1   HGNC cytogenetic band: 9p24.1

CD274 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 9         GeneLoc Exon Structure

GeneLoc location for GC09P005444:     (about GC identifiers)

Start:
5,440,559 bp from pter
End:
5,471,569 bp from pter
Size:
31,011 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000009.10  NT_008413.17  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: PD1L1_HUMAN, Q9NZQ7 (See protein sequence)
Recommended Name: Programmed cell death 1 ligand 1 precursor  
Size: 290 amino acids; 33275 Da
Subunit: Interacts with PDCD1
Subcellular location: Isoform 1: Cell membrane; Single-pass type I membrane protein
Subcellular location: Isoform 2: Endomembrane system; Single-pass type I membrane protein
PDB structure from and Proteopedia :
3BIK (3D)    3BIS (3D)    
Secondary accessions: B4DU27 Q14CJ2 Q66RK1 Q6WEX4 Q9NUZ5
Alternative splicing: 3 isoforms:  Q9NZQ7-1   Q9NZQ7-2   Q9NZQ7-3   

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_054862.1  

    ENSEMBL proteins: 
    ENSP00000370989 ENSP00000262354 ENSP00000370985 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    R&D Systems Recombinant & Natural Proteins for CD274 (B7-H1/PD-L1)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (CD274)
    Human Recombinant Proteins from Abnova (CD274)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    3 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886 plasma membrane IEA--
    GO:0012505 endomembrane system IEA--
    GO:0016021 integral to membrane IEA--
    About this table

    Antibodies for CD274: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Sigma-Aldrich Antibodies for CD274
    R&D Systems Antibodies for CD274 (B7-H1/PD-L1)
    Antibodies from Abcam (CD274), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (CD274)
    Novus Biologicals Antibodies for CD274

    Assays for CD274: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5 InterPro domains/families:
     IPR013162 CD80_C2-set
     IPR013783 Ig-like_fold
     IPR007110 Ig-like
     IPR003599 Ig_sub
     IPR013151 Ig


       GeneDecks  CD274 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q9NZQ7

    ProtoNet protein and cluster: Q9NZQ7

    1 Blocks protein family: IPB013106 Immunoglobulin V-set

    UniProtKB/Swiss-Prot: PD1L1_HUMAN, Q9NZQ7
    Similarity: Belongs to the immunoglobulin superfamily. BTN/MOG family
    Similarity: Contains 1 Ig-like C2-type (immunoglobulin-like) domain
    Similarity: Contains 1 Ig-like V-type (immunoglobulin-like) domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CD274)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (CD274)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014143

                  Applied Biosystems Silencer® siRNAs for CD274

                  Sigma-Aldrich siRNA for CD274  
                         Sigma-Aldrich shRNA Panels and shRNA for CD274  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_014143
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_014143
                                     untagged cDNA clone in CMV expression vector: NM_014143 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_014143

    UniProtKB/Swiss-Prot: PD1L1_HUMAN, Q9NZQ7
    Function: Involved in the costimulatory signal, essential for T-cell proliferation and production
    of IL10 and IFNG, in an IL2-dependent and a PDCD1-independent manner. Interaction with PDCD1
    inhibits T-cell proliferation and cytokine production
    Induction: Up-regulated on T- and B-cells, dendritic cells, keratinocytes and monocytes after LPS
    and IFNG activation. Up-regulated in B-cells activated by surface Ig cross-linking

    3 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Cd274):

    hematopoietic systemimmune systemno phenotypic analysis

    1 Gene Ontology (GO) molecular function term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004872 receptor activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


    1 Kegg Pathway  (Kegg details for CD274):
     hsa04514 Cell adhesion molecules (CAMs)

       GeneDecks  CD274 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  CD274 


    5/17 Interacting proteins for CD274 (ENSP000002623543) via UniProtKB, MINT, and/or STRING (see all 17 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PDCD1ENSP000003350623STRING (score=.997)
    ICOSENSP000003194763STRING (score=.964)
    CD28ENSP000003248903STRING (score=.96)
    CTLA4ENSP000003039393STRING (score=.959)
    CD8AENSP000002836353STRING (score=.9)
    About this table

    3 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006955 immune response TAS10581077
    GO:0007166 cell surface receptor linked signal transduction TAS10581077
    GO:0008283 cell proliferation TAS10581077
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for CD274
    2 Novoseek chemical compound relationships for CD274 gene
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    ionomycin 15.72 1 15780196 (1)
    nitric oxide 0.00 7 16606666 (1), 17161871 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (CD274)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (CD274)
                  OriGene 29mer shRNA kit in GFP-retroviral vector: NM_014143

                  Sigma-Aldrich siRNA for CD274  
                         Sigma-Aldrich shRNA Panels and shRNA for CD274  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_014143  

    REFSEQ mRNAs for CD274 gene: 

    NM_014143.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_014143  

                  OriGene GFP tagged cDNA clone in CMV expression vector: NM_014143
                                     Myc/DDK tagged cDNA clone in CMV expression vector: NM_014143
                                     untagged cDNA clone in CMV expression vector: NM_014143 

    Additional cDNA sequence: 

    AF177937.1 AF233516.1 AK001894.1 AK300470.1 AK314567.1 AY254342.1 AY291313.1 AY714881.1 
    BC069381.1 BC074984.2 BC113734.1 BC113736.1 DQ286582.1 DQ836393.1 

    8 DOTS entries:

    DT.121168514  DT.95134823  DT.100831039  DT.101981824  DT.203629  DT.423576  DT.40281578  DT.91904332 

    24/92 AceView cDNA sequences (see all 92 ):

    BQ012403 BU629434 AI678841 BU621474 BX399016 AF233516 CK904743 CA309674 
    BC074984 NM_014143 AY254342 AK001894 AY291313 BX351715 BQ013314 N32809 
    AF177937 AY714881 BE043008 BG542122 CF529178 AU134845 CF529106 BC069381 

    highest scoring ESTs for CD274:

    AF177937 AF233516 AK001894 AU156706 AY254342 AY291313 BC069381 BQ012403 BQ013314 BQ013977 

    Unigene Cluster for CD274:

    CD274 molecule
    Hs.521989  [show with all ESTs]
    Unigene Representative Sequence: NM_014143


    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for CD274

    ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8
    SP1:                                                                        
    SP2:                                      -                 -               
    SP3:                          -                                             
    SP4:              -     -                                                   

    About this scheme

    ECgene alternative splicing isoforms for CD274

    3 Ensembl transcripts including schematic representations:
    ENST00000381577  ENST00000262354  ENST00000381573  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    CD274 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for CD274

    1 / 2 / 3

    3 probe-sets matching CD274 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    56769_at2, 3 U95-B 1 0.94 1.00 1.00 1.00 AA292201 0.40 1.00 0.76 1

    223834_at2, 3 U133-B 1 1.00 1.00 -- -- AF233516 0.80 1.00 0.91 1

    223834_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: GAGTATTTGT

    SOURCE GeneReport for Unigene cluster: Hs.521989

    UniProtKB/Swiss-Prot: PD1L1_HUMAN, Q9NZQ7
    Tissue specificity: Highly expressed in the heart, skeletal muscle, placenta and lung. Weakly
    expressed in the thymus, spleen, kidney and liver. Expressed on activated T- and B-cells,
    dendritic cells, keratinocytes and monocytes

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for CD274 gene from 5/6 species (see all 6 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    CD2741   -- CD274 molecule 86.11(n)
    81.14(a)
    484186  XM_541302.2  XP_541302.2 
    chimpanzee
    (Pan troglodytes)
    CD2741   -- CD274 molecule 99.54(n)
    99.66(a)
    464981  XM_001140705.1  XP_001140705.1 
    cow
    (Bos taurus)
    CD2741   -- CD274 molecule 83.27(n)
    75.85(a)
    533834  XM_613366.3  XP_613366.3 
    rat
    (Rattus norvegicus)
    Cd2741   -- CD274 molecule 76.24(n)
    70.21(a)
    499342  XM_574652.2  XP_574652.2 
    mouse
    (Mus musculus)
    Cd2741, 5 195
    CD274 antigen1, 5 76.36(n)1
    69.9(a)1
    605331  NM_021893.21  NP_068693.11 
     AF2335175  AF3170885  (see all 8)
    About this table        Species with no ortholog for CD274

    ENSEMBL Gene Tree for CD274
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for CD274 gene
    PDCD1LG22  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/125 NCBI SNPs in CD274 are shown (see all 125 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 80)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 9 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs22971361,2
    A,C,F,H,O5457955(-) ACGGGT/CCCATT 1 -- ut31 ese38Minor allele frequency- C:0.26EA NA EU WA 1490
    --
    rs8223371,2
    A,C,F,H5439154(+) GTACCA/TGTAAA 1 -- ng514Minor allele frequency- T:0.49EU EA WA 418
    rs41438151,2
    A,C,F,H5458257(+) AATTTC/GTTTTC 1 -- ut31 ese312Minor allele frequency- N:0.00EA NA EU WA 1054
    rs8223361,2
    A,F,H5438690(+) GAGCAG/CCAAGC 1 -- ng518Minor allele frequency- C:0.35EU EA WA NA 778
    rs108152251,2
    A,C5440497(+) CCTCCC/GGGCCT 1 -- ng510--------
    rs125513331,2
    C,H5447171(+) AATTAG/CACCTG 1 H/D mis1 ese34Minor allele frequency- C:0.00EU EA WA 416
    rs13299471,2
    C5439336(-) TAGGGG/TTTGGG 1 -- ng510--------
    rs42782011,2
    H5447212(+) GATAAG/AAACAT 1 K/K syn1 ese34Minor allele frequency- A:0.00EU EA WA 418
    rs8660661,2
    A,C,F,H,O5440953(-) AGCTGG/ACGGTG 1 -- int17Minor allele frequency- A:0.30NA EA EU WA 658
    rs22820551,2
    A,C,F,H,O5445732(-) TACAAA/CATTTC 1 -- int112Minor allele frequency- C:0.50EA NA EU WA 2410
    About this table

    HapMap Linkage Disequilibrium images for CD274 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 605402

    10/22 Novoseek disease relationships for CD274 gene (see all 22 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    tumor escape 51.47 1 19380770 (1)
    lupus nephritis 48.57 2 16386962 (1), 15885642 (1)
    autoimmune diseases 42.18 4 19081139 (1), 11323285 (1), 15599732 (1), 12721664 (1)
    hepatitis b chronic 38.52 8 18705009 (3), 17963598 (3), 18578991 (2)
    autoimmunity 32.48 1 11015443 (1)
    tumors 32.25 92 17239274 (6), 17186290 (5), 17340590 (5), 15297412 (4) (see all 31)
    virus infection 26.36 9 16876901 (2), 19075244 (2), 14686489 (1), 17195077 (1) (see all 6)
    cancer 26.23 43 17186290 (5), 12721664 (3), 16413538 (2), 17195077 (2) (see all 15)
    hepatitis autoimmune 25.13 2 16876901 (1)
    renal cancer 21.82 2 17239274 (1), 17340590 (1)
    About this table

    Human Genome Epidemiology Navigator: CD274 (4 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/156 PubMed articles for CD274 gene (see all 156 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 29126 HGNC: 17635 AceView: PDCD1LG1 Ensembl:ENSG00000120217 euGenes: HUgn29126
    ECgene: CD274 H-InvDB: CD274
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for CD274:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
      Invitrogen Antibodies  Invitrogen Assays
      Invitrogen Clones  Invitrogen Q-PCR Products
      Invitrogen Human Recombinant Kinases  Invitrogen Custom Antibody and Peptide Service
      Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for CD274-related products

     Millipore Custom Antibody & Bulk Services
     Millipore Preclinical / Clinical Development Services
     Millipore Immunoassay Services
     Millipore Target Screening & Profiling Services


     Predesigned and custom siRNAs for CD274 Antibodies for CD274
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for CD274 Browse small molecules at Sigma-Aldrich
     "Your Favorite Gene" Pathwaysfeedback


      
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     Antibodies for CD274

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