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Aliases & Descriptions for CD19
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| B4 2 | | Leu-12 3 | | MGC12802 2 |
| | | Descriptions |
|---|
| B-lymphocyte antigen CD19 2 | | B-lymphocyte surface antigen B4 3 | | CD19 antigen 1, 2, 3 | | CD19 molecule 2 | | Differentiation antigen CD19 3 |
|
| | Search outside databases for aliases for CD19 genePrevious GC identifers: GC16U990011 GC16P029266 GC16P028941 GC16P028980 |
Summaries for CD19(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CD19: Lymphocytes proliferate and differentiate in response to various concentrations of different antigens. The ability of the B cell to respond in a specific, yet sensitive manner to the various antigens is achieved with the use of low-affinity antigen receptors. This gene encodes a cell surface molecule which assembles with the antigen receptor of B lymphocytes in order to decrease the threshold for antigen receptor-dependent stimulation. [provided by RefSeq] UniProtKB/Swiss-Prot: CD19_HUMAN, P15391Function: Assembles with the antigen receptor of B lymphocytes in order to decrease the threshold for antigen receptor-dependent stimulationGene Wiki entry for CD19 |
Genomic Location for CD19
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CD19 gene 
Entrez Gene cytogenetic band: 16p11.2 Ensembl cytogenetic band: 16p11.2 HGNC cytogenetic band: 16p11.2CD19 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure GeneLoc location for GC16P028850:
(about GC identifiers)
Start:
|
28,850,761 bp from pter |
End:
|
28,858,164 bp from pter |
Size:
|
7,404 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000016.8 NT_010393.15
| Proteins for CD19
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CD19_HUMAN, P15391 (See
protein sequence)Recommended Name: B-lymphocyte antigen CD19 precursor Size: 556 amino acids; 61128 Da
Subunit: Forms a complex with CD21, CD81 and CD225 in the membrane of mature B cells. Interacts with VAV. Interacts with GRB2 and SOS when phosphorylated on Tyr-348 and/or Tyr-378. Interacts with PLCG2 when phosphorylated on Tyr-409
Subcellular location: Membrane; Single-pass type I membrane protein
Sequence caution: Sequence=AAA35533.1; Type=Frameshift; Positions=396;
Secondary accessions: Q96S68 Q9BRD6Post-translational modifications:
Phosphorylated on serine and threonine upon DNA damage, probably by ATM or ATR. Phosphorylated on tyrosine following B-cell activation1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001761.3
ENSEMBL proteins: ENSP00000370048 ENSP00000313419
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for CD19: Assays for CD19: | Protein
Domains/ Families for CD19(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P15391
ProtoNet protein and cluster: P15391 1 Blocks protein family: IPB003599 Immunoglobulin subtype
UniProtKB/Swiss-Prot: CD19_HUMAN, P15391Similarity: Contains 2 Ig-like C2-type (immunoglobulin-like) domains | Gene Function for CD19
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001770
Applied Biosystems Silencer® siRNAs for CD19
Sigma-Aldrich siRNA for CD19  Sigma-Aldrich shRNA Panels and shRNA for CD19  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001770                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001770                                  untagged cDNA clone in CMV expression vector: NM_001770 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001770
UniProtKB/Swiss-Prot: CD19_HUMAN, P15391Function: Assembles with the antigen receptor of B lymphocytes in order to decrease the threshold for antigen receptor-dependent stimulationGenatlas biochemistry entry for CD19:cell differentiation antigen CD19,95kDa,B cell surface membrane protein PAX5 (BSAP) dependent,identified by monoclonal antibodies B4,HD37 and others ,linked to the integrin associated CD9,CD81,KAI111 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Cd19):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CD19
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for CD19 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CD19 
5/131 Interacting proteins for CD19 (ENSP000003134193 P153911) via UniProtKB, MINT, and/or STRING (see all 131
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for CD19(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for CD19 5 Novoseek chemical compound relationships for CD19 gene
About this table
|
Transcripts for CD19(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001770
Sigma-Aldrich siRNA for CD19  Sigma-Aldrich shRNA Panels and shRNA for CD19  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001770 REFSEQ mRNAs for CD19 gene: NM_001770.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001770               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001770                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001770                                  untagged cDNA clone in CMV expression vector: NM_001770  Additional cDNA sequence: AK130657.1 AK301167.1 AK301363.1 AK304456.1 AK307295.1 AK313577.1 BC006338.2 BC052294.1 M21097.1 X13312.1 6 DOTS entries: DT.454928 DT.99961528 DT.95082330 DT.95268084 DT.91833223 DT.95268082 24/58 AceView cDNA sequences (see all 58
):AW574858 BP340570 BQ055377 BP340638 BX094429 BQ066405 BG258419 BI769680 AK130657 BC006338 BC052294 AW402245 NM_001770 BF238170 BG341660 BQ063609 BI837054 BQ709716 BM801076 BF975777 BG342178 BG754924 BQ057181 BG758327
highest scoring ESTs for CD19:AA760729 AI217645 AI356451 AI384038 AI475697 AI805108 AW574858 AW976846 BC006338 BC052294 Unigene Cluster for CD19: CD19 molecule Hs.652262 [show with all ESTs]Unigene Representative Sequence: BC052294
GeneLoc Exon Structure
5/6 Alternative Splicing Database (ASD) splice patterns (SP) for CD19 (see all 6
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7a | · | 7b | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for CD19
2 Ensembl transcripts including schematic representations: ENST00000380673
ENST00000324662
|
Expression for CD19
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CD19 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CD19
1 / 2 / 3 4 probe-sets matching CD19 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGGAAGATGC
SOURCE GeneReport for Unigene cluster: Hs.652262
Expression variation in blood from EXPOLDB for CD19 |
Orthologs for CD19
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CD19 gene from 4 species
About this table Species with no ortholog for CD19
ENSEMBL Gene Tree for CD19 | Paralogs for CD19(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for CD19(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CD19 (up to first 250kb)
|
Disorders & Mutations for CD19
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 107265 UniProtKB/Swiss-Prot: CD19_HUMAN, P15391
Defects in CD19 are a cause of hypogammaglobulinemia [MIM:107265]10/11 Novoseek disease relationships for CD19 gene (see all 11
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| lymphoblastic leukemia acute |
69.35 |
1 |
7517719 (1) |
| leukemia lymphocytic chronic |
64.57 |
1 |
7691238 (1) |
| plasma cell myeloma |
57.96 |
2 |
12002767 (1), 8639790 (1) |
| leukemia |
57.66 |
4 |
1705571 (1), 9684930 (1), 9566763 (1), 8528044 (1) |
| myeloma |
54.59 |
7 |
10201980 (2), 8639790 (1) |
| b-all |
48.47 |
4 |
16185473 (2), 16939815 (1) |
| lymphoma |
48.33 |
4 |
1705571 (1), 1692257 (1), 9566763 (1), 8528044 (1) |
| blast crisis |
45.61 |
1 |
1518143 (1) |
| lymphoma non-hodgkins |
33.94 |
2 |
1706642 (1), 7517719 (1) |
| lymphoma b-cell |
21.70 |
1 |
16506527 (1) |
About this table
1 PharmGKB disease relationship for CD19 geneAbout this table
GeneTests: CD19 Common Variable Immune Deficiency Human Gene Mutation Database: CD19 Genetic Association Database: CD19 Human Genome Epidemiology Navigator: CD19 (8 documents)
|
Medical News for CD19(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for CD19 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/155 PubMed articles for CD19 gene (see all 155
):- Polymorphisms of human CD19 gene: possible association with susceptibility to systemic lupus erythematosus in Japanese. (PubMed id 12215898)3, 4, 6 Kuroki K.... Tokunaga K. (2002)
- Structure of the genes encoding the CD19 antigen of human and mouse B lymphocytes. (PubMed id 1370948)1, 3, 4 Zhou L.J.... Tedder T.F. (1992)
- An antibody-deficiency syndrome due to mutations in the CD19 gene. (PubMed id 16672701)3, 4 van Zelm M.C.... Franco J.L. (2006)
- Association of a functional CD19 polymorphism with susceptibility to systemic sclerosis. (PubMed id 15593213)3, 6 Tsuchiya N....Sato S. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Systematic analysis of the role of CD19 cytoplasmic tyrosines in enhancement of activation in Daudi human B cells: clustering of phospholipase C and Vav and of Grb2 and Sos with different CD19 tyrosines. (PubMed id 10706702)3, 4 Brooks S.R.... Carter R.H. (2000)
- The promoter of the CD19 gene is a target for the B-cell-specific transcription factor BSAP. (PubMed id 1375324)3, 4 Kozmik Z.... Busslinger M. (1992)
- Isolation of cDNAs encoding the CD19 antigen of human and mouse B lymphocytes. A new member of the immunoglobulin superfamily. (PubMed id 2472450)3, 4 Tedder T.F. and Isaacs C.M. (1989)
- CD19, the earliest differentiation antigen of the B cell lineage, bears three extracellular immunoglobulin-like domains and an Epstein- Barr virus-related cytoplasmic tail. (PubMed id 2459292)3, 4 Stamenkovic I. and Seed B. (1988)
- CD19 regulates Src family protein tyrosine kinase activation in B lymphocytes through processive amplification. (PubMed id 10933394)1, 3 Fujimoto M....Tedder T.F. (2000)
|
Search for CD19
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CD19
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CD19
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CD19(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CD19(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CD19:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for CD19  |
| | Recombinant Proteins (CD3 + CD19, CD10 + CD19, Kappa + CD19, CD2 + CD19, CD19, CD3 + CD19 + CD45, Lambda + CD19, CD86 + CD19, CD5 + CD19) | | Antibodies (CD3 + CD19, CD10 + CD19, Kappa + CD19, CD2 + CD19, CD19, CD3 + CD19 + CD45, Lambda + CD19, CD86 + CD19, CD5 + CD19) |
| | | Search Tocris compounds for CD19 |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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