Aliases for CD164L2 Gene
Aliases for CD164L2 Gene
External Ids for CD164L2 Gene
- HGNC: 32043
- Entrez Gene: 388611
- Ensembl: ENSG00000174950
- UniProtKB: Q6UWJ8
Previous GeneCards Identifiers for CD164L2 Gene
- GC01M027578
- GC01M027705
- GC01M025961
Summaries for CD164L2 Gene
GeneCards Summary for CD164L2 Gene
CD164L2 (CD164 Molecule Like 2) is a Protein Coding gene. An important paralog of this gene is CD164.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CD164L2 Gene
Genomics for CD164L2 Gene
Regulatory Elements for CD164L2 Gene
Enhancers for CD164L2 Gene
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CD164L2 on UCSC Golden Path with GeneCards custom track
- Transcription factor binding sites by QIAGEN in the CD164L2 gene promoter:
Regulatory Element Products
Genomic Location for CD164L2 Gene
- Chromosome:
- 1
- Start:
- 27,379,100 bp from pter
- End:
- 27,383,380 bp from pter
- Size:
- 4,281 bases
- Orientation:
- Minus strand
Genomic View for CD164L2 Gene
Genes around CD164L2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p36.11 by Ensembl
- 1p36.11 by Entrez Gene
- 1p36.11 by HGNC
CD164L2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CD164L2 Gene
Proteins for CD164L2 Gene
-
Protein details for CD164L2 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6UWJ8-C16L2_HUMAN
- Recommended name:
- CD164 sialomucin-like 2 protein
- Protein Accession:
- Q6UWJ8
- B2RPJ0
- Q5JXD6
Protein attributes for CD164L2 Gene
- Size:
- 174 amino acids
- Molecular mass:
- 18534 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for CD164L2 Gene
Other Protein References for CD164L2 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for CD164L2
- Invitrogen Antibodies for CD164L2
- Search GeneTex for Antibodies for CD164L2
Protein Products
-
OriGene Purified Proteins for CD164L2
- Search Origene for MassSpec and Protein Over-expression Lysates for CD164L2
- Origene Custom Protein Services for CD164L2
- Novus Biologicals proteins for CD164L2
- ProSpec Recombinant Proteins for CD164L2
- Search GeneTex for Proteins for CD164L2
Assay Products
No data available for DME Specific Peptides for CD164L2 Gene
Domains & Families for CD164L2 Gene
Protein Domains for CD164L2 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for CD164L2 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q6UWJ8- Family:
-
- Belongs to the CD164 family.
No data available for Gene Families for CD164L2 Gene
Function for CD164L2 Gene
Phenotypes for CD164L2 Gene
- GenomeRNAi human phenotypes for CD164L2:
Animal Model Products
-
Taconic Biosciences Mouse Models for CD164L2
- Cyagen custom Knockout/knockin (KOKI) mouse models for CD164L2
-
-
ViGene Biosciences lentiviral particle packaged cDNA for CD164L2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CD164L2 gene
- Search ViGene Biosciences for CD164L2
CRISPR Products
-
OriGene CRISPR knockouts for CD164L2
-
Santa Cruz Biotechnology (SCBT) CRISPR for CD164L2
- GenScript: Design CRISPR guide RNA sequences for CD164L2
miRNA Products
- Search ViGene Biosciences for CD164L2
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CD164L2
- Browse OriGene Inhibitory RNA Products For CD164L2
-
ViGene Biosciences ready-to-package AAV shRNAs for CD164L2 gene
Clone Products
-
OriGene ORF clones in human for CD164L2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CD164L2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CD164L2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for CD164L2
-
ViGene Biosciences adenoviral particle packaged cDNA for CD164L2 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for CD164L2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CD164L2 gene
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CD164L2 Gene
Localization for CD164L2 Gene
Subcellular locations from UniProtKB/Swiss-Prot for CD164L2 Gene
- Membrane; Single-pass type I membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 2 |
| extracellular | 2 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016021 | integral component of membrane | IEA | -- |
Pathways & Interactions for CD164L2 Gene
No Data Available
No data available for Pathways by source and SIGNOR curated interactions for CD164L2 Gene
Transcripts for CD164L2 Gene
mRNA/cDNA for CD164L2 Gene
- (4) REFSEQ mRNAs :
- (2) Additional mRNA sequences :
- (18) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for CD164L2 Gene
CRISPR Products
-
OriGene CRISPR knockouts for CD164L2
-
Santa Cruz Biotechnology (SCBT) CRISPR for CD164L2
- GenScript: Design CRISPR guide RNA sequences for CD164L2
miRNA Products
- Search ViGene Biosciences for CD164L2
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CD164L2
- Browse OriGene Inhibitory RNA Products For CD164L2
-
ViGene Biosciences ready-to-package AAV shRNAs for CD164L2 gene
Clone Products
-
OriGene ORF clones in human for CD164L2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CD164L2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CD164L2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CD164L2 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Bone (Muscoskeletal System)
mRNA differential expression in normal tissues according to GTEx for CD164L2 Gene
This gene is overexpressed in Esophagus - Mucosa (x10.9), Skin - Sun Exposed (Lower leg) (x6.3), Vagina (x5.3), Skin - Not Sun Exposed (Suprapubic) (x5.1), and Fallopian Tube (x4.2).
NURSA nuclear receptor signaling pathways regulating expression of CD164L2 Gene:
CD164L2SOURCE GeneReport for Unigene cluster for CD164L2 Gene:
Hs.664836Primer Products
-
OriGene qPCR primer pairs for CD164L2
No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CD164L2 Gene
Orthologs for CD164L2 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | CD164L2 34 35 |
|
||
| dog (Canis familiaris) |
Mammalia | CD164L2 34 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | LOC100359977 34 |
|
||
| mouse (Mus musculus) |
Mammalia | Cd164l2 34 16 35 |
|
||
| cow (Bos Taurus) |
Mammalia | CD164L2 35 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | CD164L2 35 |
|
OneToOne | |
| zebrafish (Danio rerio) |
Actinopterygii | cd164l2 34 35 |
|
- Species where no ortholog for CD164L2 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for CD164L2 Gene
(1) SIMAP similar genes for CD164L2 Gene using alignment to 2 proteins:
Variants for CD164L2 Gene
| SNP ID | Clin | Chr 01 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000690253 | -- | 27,381,640(+) | TCCAA(A/C)CCATT | intron-variant | |
| rs1001135366 | -- | 27,384,185(+) | CCATC(A/T)GTCCC | upstream-variant-2KB | |
| rs1002194981 | -- | 27,385,119(+) | ATCAC(G/T)TGGAC | upstream-variant-2KB | |
| rs1002272046 | -- | 27,378,751(+) | TCAAA(A/G)ATGAA | downstream-variant-500B | |
| rs1002323172 | -- | 27,383,019(+) | CTCCC(A/G)CCCCT | intron-variant |
Residual Variation Intolerance Score:
57.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
3.96;
59.85% of all genes are more intolerant (likely to be disease-causing)
Relevant External Links for CD164L2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CD164L2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CD164L2 Gene
Disorders for CD164L2 Gene
Relevant External Links for CD164L2
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- CD164L2
No disorders were found for CD164L2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CD164L2 Gene
Publications for CD164L2 Gene
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4 64
- Signal peptide prediction based on analysis of experimentally verified cleavage sites. (PMID: 15340161) Zhang Z. … Henzel W.J. (Protein Sci. 2004) 3 4 64
- The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3 4 64
- The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
- A common genetic variant of FCN3/CD164L2 is associated with essential hypertension in a Chinese population. (PMID: 22471352) Lu J. … Jia W. (Clin. Exp. Hypertens. 2012) 3 64
Products for CD164L2 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
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- Browse cDNA Clones
- Browse Cell Culture Products
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- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for CD164L2
- Search Origene for MassSpec and Protein Over-expression Lysates for CD164L2
- Origene Custom Protein Services for CD164L2
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CD164L2
- Browse OriGene Inhibitory RNA Products For CD164L2
- OriGene qPCR primer pairs for CD164L2
- OriGene CRISPR knockouts for CD164L2
- OriGene ORF clones in human for CD164L2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CD164L2
- GenScript: Next-day shipping cDNA ORF clone for CD164L2 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for CD164L2
- GenScript Custom Assay Services for CD164L2
- GenScript Custom overexpressing Cell Line Services for CD164L2
- GenScript: Design CRISPR guide RNA sequences for CD164L2
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagents
- Novus Biologicals Antibodies for CD164L2
- Novus Biologicals proteins for CD164L2
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- ProSpec Recombinant Proteins for CD164L2
- Taconic Biosciences Mouse Models for CD164L2
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- ViGene Biosciences adenoviral particle packaged cDNA for CD164L2 gene
- ViGene Biosciences lentiviral particle packaged cDNA for CD164L2 gene
- ViGene Biosciences ready-to-package AAV shRNAs for CD164L2 gene
- Search ViGene Biosciences for CD164L2
- Horizon Cell Lines for CD164L2
- Cyagen custom Knockout/knockin (KOKI) mouse models for CD164L2
- VectorBuilder custom plasmid, inducible vectors for CD164L2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CD164L2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CD164L2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer