Aliases for CD163 Gene
Aliases for CD163 Gene
External Ids for CD163 Gene
- HGNC: 1631
- Entrez Gene: 9332
- Ensembl: ENSG00000177575
- OMIM: 605545
- UniProtKB: Q86VB7
Previous GeneCards Identifiers for CD163 Gene
- GC12U990123
- GC12M007759
- GC12M007523
- GC12M007516
- GC12M007517
- GC12M007623
Summaries for CD163 Gene
-
The protein encoded by this gene is a member of the scavenger receptor cysteine-rich (SRCR) superfamily, and is exclusively expressed in monocytes and macrophages. It functions as an acute phase-regulated receptor involved in the clearance and endocytosis of hemoglobin/haptoglobin complexes by macrophages, and may thereby protect tissues from free hemoglobin-mediated oxidative damage. This protein may also function as an innate immune sensor for bacteria and inducer of local inflammation. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]
GeneCards Summary for CD163 Gene
CD163 (CD163 Molecule) is a Protein Coding gene. Diseases associated with CD163 include Rosai-Dorfman Disease and Non-Langerhans-Cell Histiocytosis. Among its related pathways are Vesicle-mediated transport and Dendritic Cells Developmental Lineage Pathway. GO annotations related to this gene include scavenger receptor activity. An important paralog of this gene is CD163L1.
UniProtKB/Swiss-Prot for CD163 Gene
-
Acute phase-regulated receptor involved in clearance and endocytosis of hemoglobin/haptoglobin complexes by macrophages and may thereby protect tissues from free hemoglobin-mediated oxidative damage. May play a role in the uptake and recycling of iron, via endocytosis of hemoglobin/haptoglobin and subsequent breakdown of heme. Binds hemoglobin/haptoglobin complexes in a calcium-dependent and pH-dependent manner. Exhibits a higher affinity for complexes of hemoglobin and multimeric haptoglobin of HP*1F phenotype than for complexes of hemoglobin and dimeric haptoglobin of HP*1S phenotype. Induces a cascade of intracellular signals that involves tyrosine kinase-dependent calcium mobilization, inositol triphosphate production and secretion of IL6 and CSF1. Isoform 3 exhibits the higher capacity for ligand endocytosis and the more pronounced surface expression when expressed in cells.
-
After shedding, the soluble form (sCD163) may play an anti-inflammatory role, and may be a valuable diagnostic parameter for monitoring macrophage activation in inflammatory conditions.
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CD163 Gene
Genomics for CD163 Gene
Regulatory Elements for CD163 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH12G007555 | 1.2 | FANTOM5 Ensembl ENCODE | 4 | -52.5 | -52462 | 1.6 | LEF1 ATF1 CEBPG GABPA MEF2D ATF3 EZH2 NFE2L2 | CD163L1 CD163 PEX5 SLC2A3 GC12M007519 |
| GH12G007512 | 1.3 | FANTOM5 Ensembl ENCODE | 1.7 | -8.9 | -8879 | 0.3 | MAX ZNF644 RAD21 YY1 HNF4G FOS NFE2 NFIA HLF REST | PEX5 SLC2A3 CD163 GC12M007519 |
| GH12G007498 | 0.7 | Ensembl ENCODE | 0.7 | +4.6 | 4593 | 1.8 | JUND ZEB1 | ATN1 CD163 CD163L1 |
| GH12G007500 | 0.5 | Ensembl | 0.7 | +1.5 | 1519 | 4.0 | ZNF600 NFE2 PRDM1 MAFK | ATN1 CD163 CD163L1 |
| GH12G007540 | 0.9 | Ensembl ENCODE | 0.3 | -38.2 | -38183 | 2.4 | NFIB CHD7 FOXA1 GATA3 NFIC GATA2 POU5F1 ZNF18 | DPPA3 GC12M007519 CD163 |
- Transcription factor binding sites by QIAGEN in the CD163 gene promoter:
Regulatory Element Products
Genomic Location for CD163 Gene
- Chromosome:
- 12
- Start:
- 7,470,813 bp from pter
- End:
- 7,503,893 bp from pter
- Size:
- 33,081 bases
- Orientation:
- Minus strand
Genomic View for CD163 Gene
- Cytogenetic band:
-
- 12p13.31 by Ensembl
- 12p13.31 by Entrez Gene
- 12p13.31 by HGNC
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CD163 Gene
Proteins for CD163 Gene
-
Protein details for CD163 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q86VB7-C163A_HUMAN
- Recommended name:
- Scavenger receptor cysteine-rich type 1 protein M130
- Protein Accession:
- Q86VB7
- C9JIG2
- Q07898
- Q07899
- Q07900
- Q07901
- Q2VLH7
Protein attributes for CD163 Gene
- Size:
- 1156 amino acids
- Molecular mass:
- 125451 Da
- Quaternary structure:
-
- Interacts with CSNK2B.
- Miscellaneous:
-
- Intravenous lipopolysaccharide (LPS) produces a rapid rise of sCD163 in plasma of patient as it induces metalloproteinase-mediated shedding from monocytes surface. Long-term LPS infusion finally increases expression of the membrane-bound form on circulating monocytes.
- The soluble form (sCD163) in plasma is a novel parameter in diseases affecting macrophage function and monocyte/macrophage load in the body. The concentration of sCD163 is probably reflecting the number of macrophages of the alternative macrophage activation phenotype with a high CD163 expression playing a major role in dampening the inflammatory response and scavenging components of damaged cells. This has initiated a number of clinical studies for evaluation of sCD163 as a disease marker in inflammatory conditions e.g. infection, autoimmune disease, transplantation, atherosclerosis and cancer.
- SequenceCaution:
-
- Sequence=CAA80541.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAA80542.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAA80543.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAA80544.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAB45233.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
Protein Expression for CD163 Gene
Post-translational modifications for CD163 Gene
- A soluble form (sCD163) is produced by proteolytic shedding which can be induced by lipopolysaccharide, phorbol ester and Fc region of immunoglobulin gamma. This cleavage is dependent on protein kinase C and tyrosine kinases and can be blocked by protease inhibitors. The shedding is inhibited by the tissue inhibitor of metalloproteinase TIMP3, and thus probably induced by membrane-bound metalloproteinases ADAMs.
- Phosphorylated.
- Glycosylation at Asn105, Asn140, posLast=767767, and Asn1027
- Modification sites at PhosphoSitePlus
Other Protein References for CD163 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- R&D Systems Antibodies for CD163 (CD163)
-
Custom Antibody ServicesOriGene Antibodies for CD163
- TA506393JM
- TA506393HM
- TA506393GM
- TA506393FM
- TA506393EM
- TA506393DM
- TA506393CM
- TA506393BM
- TA506393AM
- TA506392JM
- TA506392HM
- TA506392GM
- TA506392FM
- TA506392EM
- TA506392DM
- TA506392CM
- TA506392BM
- TA506392AM
- TA506391JM
- TA506391HM
- TA506391GM
- TA506391FM
- TA506391EM
- TA506391DM
- TA506391CM
- TA506391BM
- TA506391AM
- TA506390JM
- TA506390HM
- TA506390GM
- TA506390FM
- TA506390EM
- TA506390DM
- TA506390CM
- TA506390BM
- TA506390AM
- TA506389JM
- TA506389HM
- TA506389GM
- TA506389FM
- TA506389EM
- TA506389DM
- TA506389CM
- TA506389BM
- TA506389AM
- TA506388JM
- TA506388HM
- TA506388GM
- TA506388FM
- TA506388EM
- TA506388DM
- TA506388CM
- TA506388BM
- TA506388AM
- TA506387JM
- TA506387HM
- TA506387GM
- TA506387FM
- TA506387EM
- TA506387DM
- TA506387CM
- TA506387BM
- TA506387AM
- TA506386JM
- TA506386HM
- TA506386GM
- TA506386FM
- TA506386EM
- TA506386DM
- TA506386CM
- TA506386BM
- TA506386AM
- TA506384JM
- TA506384HM
- TA506384GM
- TA506384FM
- TA506384EM
- TA506384DM
- TA506384CM
- TA506384BM
- TA506384AM
- TA506383JM
- TA506383HM
- TA506383GM
- TA506383FM
- TA506383EM
- TA506383DM
- TA506383CM
- TA506383BM
- TA506383AM
- TA506382JM
- TA506382HM
- TA506382GM
- TA506382FM
- TA506382EM
- TA506382DM
- TA506382CM
- TA506382BM
- TA506382AM
- TA506381JM
- TA506381HM
- TA506381GM
- TA506381FM
- TA506381EM
- TA506381DM
- TA506381CM
- TA506381BM
- TA506381AM
- TA506380S
- TA506380JM
- TA506380HM
- TA506380GM
- TA506380FM
- TA506380EM
- TA506380DM
- TA506380CM
- TA506380BM
- TA506380AM
- CF506393
- TA506393
- CF506392
- TA506392
- CF506391
- TA506391
- CF506390
- TA506390
- CF506389
- TA506389
- CF506388
- TA506388
- CF506387
- TA506387
- CF506386
- TA506386
- CF506384
- TA506384
- CF506383
- TA506383
- CF506382
- TA506382
- CF506381
- TA506381
- CF506380
- TA506380
- TA353659
- TA353658
- TA353026
- TA352494
- TA352485
- TA350807
- TA327621
- TA320238
- SM2160P
- BM4112
- BM4041X
- BM4041PE
- BM4041F
- BM4041B
- BM4041
- BM4021
- BM4001S
- BM4001F
- BM4001B
- BM4001
- AP26434PU-N
- AP23809PU-S
- AP23809PU-N
- AP23809PU-M
- AM33401PU-N
- AM26138RP-N
- AM26138PU-N
- AM26138AC-N
- AM21062PU-S
- AM21062PU-N
- AM21062PU-M
- AM05884PU-S
- AM05884FC-N
- Novus Biologicals Antibodies for CD163
-
Abcam antibodies for CD163
- Invitrogen Antibodies for CD163
- antibodies-online Antibodies for CD163: See all 305
- GeneTex CD163 antibody for CD163
-
Santa Cruz Biotechnology (SCBT) Antibodies for CD163
Protein Products
- R&D Systems Proteins and Enzymes for CD163
-
OriGene Purified Proteins for CD163
- Search Origene for MassSpec and Protein Over-expression Lysates for CD163
- Origene Custom Protein Services for CD163
- antibodies-online Proteins for CD163: See all 13
- Search antibodies-online for peptides
- Search GeneTex for Proteins for CD163
-
Abcam proteins for CD163
Assay Products
-
Custom Assay ServicesOriGene ELISA Kits for CD163
- R&D Systems ELISAs, Luminex Assays, Proteome Profiler Antibody Arrays, and other biochemical assays for CD163 (CD163)
- antibodies-online Kits for CD163: See all 30
No data available for DME Specific Peptides for CD163 Gene
Domains & Families for CD163 Gene
Gene Families for CD163 Gene
Protein Domains for CD163 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for CD163 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q86VB7UniProtKB/Swiss-Prot:
C163A_HUMAN :- The SRCR domain 3 mediates calcium-sensitive interaction with hemoglobin/haptoglobin complexes.
- Domain:
-
- The SRCR domain 3 mediates calcium-sensitive interaction with hemoglobin/haptoglobin complexes.
Function for CD163 Gene
Molecular function for CD163 Gene
- GENATLAS Biochemistry:
- macrophage associated antigen,involved in myeloid specific gene expression,including several alternatively spliced isoforms,SRCR superfamily
- UniProtKB/Swiss-Prot BiophysicochemicalProperties:
- Kinetic parameters: KM=2.0 nM for hemoglobin/haptoglobin of HP*1S phenotype {ECO:0000269 PubMed:11196644}; KM=0.2 nM for hemoglobin/haptoglobin of HP*1F phenotype {ECO:0000269 PubMed:11196644};
- UniProtKB/Swiss-Prot Function:
- Acute phase-regulated receptor involved in clearance and endocytosis of hemoglobin/haptoglobin complexes by macrophages and may thereby protect tissues from free hemoglobin-mediated oxidative damage. May play a role in the uptake and recycling of iron, via endocytosis of hemoglobin/haptoglobin and subsequent breakdown of heme. Binds hemoglobin/haptoglobin complexes in a calcium-dependent and pH-dependent manner. Exhibits a higher affinity for complexes of hemoglobin and multimeric haptoglobin of HP*1F phenotype than for complexes of hemoglobin and dimeric haptoglobin of HP*1S phenotype. Induces a cascade of intracellular signals that involves tyrosine kinase-dependent calcium mobilization, inositol triphosphate production and secretion of IL6 and CSF1. Isoform 3 exhibits the higher capacity for ligand endocytosis and the more pronounced surface expression when expressed in cells.
- UniProtKB/Swiss-Prot Function:
- After shedding, the soluble form (sCD163) may play an anti-inflammatory role, and may be a valuable diagnostic parameter for monitoring macrophage activation in inflammatory conditions.
- UniProtKB/Swiss-Prot Induction:
- Induced by anti-inflammatory mediators such as glucocorticoids, interleukin-6/IL6 and interleukin-10/IL10; suppressed by proinflammatory mediators like bacterial lipopolysaccharides (LPS), IFNG/IFN-gamma and TNF.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005044 | scavenger receptor activity | NAS | 8370408 |
| GO:0005515 | protein binding | IPI | 15479433 |
Phenotypes for CD163 Gene
- MGI mutant phenotypes for CD163:
- inferred from 1 alleles
- GenomeRNAi human phenotypes for CD163:
-
- Increased vaccinia virus (VACV) infection
- Decreased viability
- Mildly decreased CFP-tsO45G cell surface transport
- Decreased shRNA abundance (Z-score < -2)
- Dynamic nuclei (hole, folded or small irregular)
- Increased shRNA abundance (Z-score > 2)
- Decreased Salmonella enterica Typhimurium invasion
- Decreased Salmonella proliferation
Animal Models for CD163 Gene
- MGI Knock Outs for CD163:
-
- Cd163 tm1(KOMP)Vlcg
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CD163
-
-
ViGene Biosciences lentiviral particle packaged cDNA for CD163 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CD163 gene
- Search ViGene Biosciences for CD163
CRISPR Products
-
OriGene CRISPR knockouts for CD163
-
Santa Cruz Biotechnology (SCBT) CRISPR for CD163
- GenScript: Design CRISPR guide RNA sequences for CD163
miRNA for CD163 Gene
- miRTarBase miRNAs that target CD163
miRNA Products
- Search ViGene Biosciences for CD163
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CD163
- Browse OriGene Inhibitory RNA Products For CD163
-
ViGene Biosciences ready-to-package AAV shRNAs for CD163 gene
Clone Products
- Sino Biological Human cDNA Clone for CD163
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CD163
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CD163
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
-
Horizon Cell Lines for CD163
-
ViGene Biosciences adenoviral particle packaged cDNA for CD163 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for CD163 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for CD163 gene
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for CD163 Gene
Localization for CD163 Gene
Subcellular locations from UniProtKB/Swiss-Prot for CD163 Gene
- Soluble CD163: Secreted.
- Cell membrane; Single-pass type I membrane protein. Note=Isoform 1 and isoform 2 show a lower surface expression when expressed in cells.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005576 | extracellular region | IEA | -- |
| GO:0005886 | plasma membrane | TAS | -- |
| GO:0005887 | integral component of plasma membrane | TAS | 8370408 |
| GO:0009897 | external side of plasma membrane | IDA | 24942581 |
| GO:0016020 | membrane | IEA | -- |
Pathways & Interactions for CD163 Gene
Pathways by source for CD163 Gene
3 Reactome pathways for CD163 Gene
2 R&D Systems pathways for CD163 Gene
Interacting Proteins for CD163 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006898 | receptor-mediated endocytosis | TAS | -- |
| GO:0006953 | acute-phase response | IEA | -- |
| GO:0006954 | inflammatory response | IEA | -- |
No data available for SIGNOR curated interactions for CD163 Gene
Drugs & Compounds for CD163 Gene
| Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs | |
|---|---|---|---|---|---|---|
| Fe2+ |
|
15438-31-0 |
|
Transcripts for CD163 Gene
mRNA/cDNA for CD163 Gene
- (5) REFSEQ mRNAs :
- (5) Additional mRNA sequences :
- (194) Selected AceView cDNA sequences:
- (11) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
-
OriGene CRISPR knockouts for CD163
-
Santa Cruz Biotechnology (SCBT) CRISPR for CD163
- GenScript: Design CRISPR guide RNA sequences for CD163
miRNA Products
- Search ViGene Biosciences for CD163
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CD163
- Browse OriGene Inhibitory RNA Products For CD163
-
ViGene Biosciences ready-to-package AAV shRNAs for CD163 gene
Clone Products
- Sino Biological Human cDNA Clone for CD163
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for CD163
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CD163
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16a | · | 16b | ^ | 17 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||||||||||||||||||||
| SP2: | - | ||||||||||||||||||||||||||||||||||
| SP3: | |||||||||||||||||||||||||||||||||||
| SP4: | - |
Expression for CD163 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Blood (Hematopoietic System)
-
Placenta (Extraembryonic Tissues)
- Hofbauer Cells Chorionic Villus
-
Chorion (Extraembryonic Tissues)
- Hofbauer Cells Chorionic Villus
-
Liver (Hepatobiliary System)
- Mature Mesothelial Cells Liver Lobule
-
Eye (Sensory Organs)
- Adult Retinal Pigmented Epithelium Cells Retinal Pigmented Epithelium
-
Epithelial Cells
- Adult Retinal Pigmented Epithelium Cells Retinal Pigmented Epithelium
-
Brain (Nervous System)
- Oligodendrocyte Precursor Cells Forebrain White Matter
- Bone (Muscoskeletal System)
-
Spleen (Hematopoietic System)
-
Gall Bladder (Hepatobiliary System)
-
Lung (Respiratory System)
-
Dermis (Integumentary System)
-
Adrenal Gland (Endocrine System)
-
Ovary (Reproductive System)
mRNA differential expression in normal tissues according to GTEx for CD163 Gene
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for CD163 Gene
NURSA nuclear receptor signaling pathways regulating expression of CD163 Gene:
CD163SOURCE GeneReport for Unigene cluster for CD163 Gene:
Hs.504641mRNA Expression by UniProt/SwissProt for CD163 Gene:
Q86VB7-C163A_HUMANEvidence on tissue expression from TISSUES for CD163 Gene
- Spleen(4.8)
- Liver(4.7)
- Bone marrow(4.5)
- Lung(3.5)
- Heart(3.4)
- Blood(3.3)
- Lymph node(3.1)
- Intestine(2.8)
- Kidney(2.8)
- Muscle(2.8)
- Nervous system(2.5)
- Skin(2.1)
Primer Products
-
OriGene qPCR primer pairs for CD163
-
OriGene qPCR primer pairs and template standards for CD163
No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for CD163 Gene
Orthologs for CD163 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | CD163 34 35 |
|
||
| dog (Canis familiaris) |
Mammalia | CD163 34 35 |
|
||
| cow (Bos Taurus) |
Mammalia | CD163 34 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Cd163 34 |
|
||
| mouse (Mus musculus) |
Mammalia | Cd163 34 16 35 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | -- 35 |
|
OneToMany | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 35 |
|
ManyToMany | |
| -- 35 |
|
ManyToMany | |||
| chicken (Gallus gallus) |
Aves | -- 35 |
|
ManyToMany | |
| -- 35 |
|
ManyToMany | |||
| -- 35 |
|
ManyToMany | |||
| -- 35 |
|
ManyToMany | |||
| -- 35 |
|
ManyToMany | |||
| zebrafish (Danio rerio) |
Actinopterygii | si:dkey-21h14.14 35 |
|
ManyToMany | |
| si:dkey-21h14.10 35 |
|
ManyToMany | |||
| si:dkey-21h14.9 35 |
|
ManyToMany | |||
| si:dkey-21h14.11 35 |
|
ManyToMany | |||
| si:dkey-21h14.8 35 |
|
ManyToMany | |||
| si:ch211-161n3.5 35 |
|
ManyToMany | |||
| si:ch211-161n3.4 35 |
|
ManyToMany |
- Species where no ortholog for CD163 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for CD163 Gene
Paralogs for CD163 Gene
(6) SIMAP similar genes for CD163 Gene using alignment to 7 proteins:
Pseudogenes.org Pseudogenes for CD163 Gene
Variants for CD163 Gene
| SNP ID | Clin | Chr 12 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000023282 | -- | 7,475,632(+) | ATATA(A/C)TATTG | intron-variant | |
| rs1000101139 | -- | 7,493,916(+) | CACAC(A/G)GTAAT | intron-variant | |
| rs1000165232 | -- | 7,504,119(+) | ATTTT(A/G)TCATA | upstream-variant-2KB | |
| rs1000234025 | -- | 7,473,578(+) | AGCAC(C/T)AAATA | intron-variant | |
| rs1000277112 | -- | 7,503,873(+) | CATTT(C/T)ATACT | upstream-variant-2KB |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1350n100 | CNV | loss | 25217958 |
| esv3303553 | CNV | mobile element insertion | 20981092 |
| esv3399549 | CNV | insertion | 20981092 |
| esv3402244 | CNV | insertion | 20981092 |
| nsv525458 | CNV | loss | 19592680 |
| nsv557269 | CNV | loss | 21841781 |
Relevant External Links for CD163 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CD163 Gene
Disorders for CD163 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| rosai-dorfman disease |
|
|
| non-langerhans-cell histiocytosis |
|
|
| adult xanthogranuloma |
|
|
| necrobiosis lipoidica |
|
|
| histiocytic sarcoma |
|
|
Relevant External Links for CD163
No data available for UniProtKB/Swiss-Prot and Genatlas for CD163 Gene
Publications for CD163 Gene
- Genomic organization and chromosomal localization of the human CD163 (M130) gene: a member of the scavenger receptor cysteine-rich superfamily. (PMID: 10403791) Ritter M. … Schmitz G. (Biochem. Biophys. Res. Commun. 1999) 2 3 4 22 64
- Cross-linking of FcgammaR triggers shedding of the hemoglobin- haptoglobin scavenger receptor CD163. (PMID: 15075364) Sulahian T.H. … Guyre P.M. (J. Leukoc. Biol. 2004) 3 4 22 64
- CD163: a regulated hemoglobin scavenger receptor with a role in the anti-inflammatory response. (PMID: 15478309) Moestrup S.K. … Moller H.J. (Ann. Med. 2004) 3 4 22 64
- Elevated levels of soluble CD163 in sera and fluids from rheumatoid arthritis patients and inhibition of the shedding of CD163 by TIMP- 3. (PMID: 12296867) Matsushita N. … Matsuyama T. (Clin. Exp. Immunol. 2002) 3 4 22 64
- Endotoxin induces rapid metalloproteinase-mediated shedding followed by up-regulation of the monocyte hemoglobin scavenger receptor CD163. (PMID: 12377940) Hintz K.A. … Guyre P.M. (J. Leukoc. Biol. 2002) 3 4 22 64
Products for CD163 Gene
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Sources for CD163 Gene
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