Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CCT8L1P Gene

Aliases for CCT8L1P Gene

  • Chaperonin Containing TCP1 Subunit 8 Like 1, Pseudogene 2 3 5
  • Chaperonin Containing TCP1, Subunit 8 (Theta)-Like 1, Pseudogene 2 3
  • CCT8L1 3 4
  • Chaperonin Containing TCP1, Subunit 8 (Theta)-Like 1 2

External Ids for CCT8L1P Gene

Previous HGNC Symbols for CCT8L1P Gene

  • CCT8L1

Previous GeneCards Identifiers for CCT8L1P Gene

  • GC07P152143

Summaries for CCT8L1P Gene

GeneCards Summary for CCT8L1P Gene

CCT8L1P (Chaperonin Containing TCP1 Subunit 8 Like 1, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for CCT8L1P Gene

  • Possible molecular chaperone; assists the folding of proteins upon ATP hydrolysis.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT8L1P Gene

Genomics for CCT8L1P Gene

Regulatory Elements for CCT8L1P Gene

Enhancers for CCT8L1P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G152459 1.1 Ensembl ENCODE 0.4 +14.9 14901 1.6 HDAC1 HDGF ATF1 FOXA2 NFIB FEZF1 ZNF766 ZNF366 CREM KDM4B LINC01003 CCT8L1P
GH07G152445 0.6 dbSUPER 0.7 +0.5 461 1.2 NFIA MIER1 NFIC SMARCA4 POLR2A GABPB1 PRDM4 ZNF558 RNA5SP250 RPL36AP28 CCT8L1P LINC01003
GH07G152438 0.9 ENCODE dbSUPER 0.4 -7.1 -7127 0.2 SMARCE1 PKNOX1 MAFG ARID1B NFIC ZNF316 SMARCA4 PBX2 NFE2L1 NFE2 ENSG00000212590 FABP5P3 CCT8L1P
GH07G152441 0.4 Ensembl 0.7 -3.8 -3817 0.4 POLR2A RNA5SP250 RPL36AP28 FABP5P3 CCT8L1P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCT8L1P on UCSC Golden Path with GeneCards custom track

Genomic Location for CCT8L1P Gene

Chromosome:
7
Start:
152,445,217 bp from pter
End:
152,447,269 bp from pter
Size:
2,053 bases
Orientation:
Plus strand

Genomic View for CCT8L1P Gene

Genes around CCT8L1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT8L1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT8L1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCT8L1P Gene

Proteins for CCT8L1P Gene

  • Protein details for CCT8L1P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NM43-TCPQL_HUMAN
    Recommended name:
    Putative T-complex protein 1 subunit theta-like 1
    Protein Accession:
    A6NM43

    Protein attributes for CCT8L1P Gene

    Size:
    557 amino acids
    Molecular mass:
    59514 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CCT8L1P Gene

Post-translational modifications for CCT8L1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCT8L1P Gene

Domains & Families for CCT8L1P Gene

Protein Domains for CCT8L1P Gene

Suggested Antigen Peptide Sequences for CCT8L1P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NM43

UniProtKB/Swiss-Prot:

TCPQL_HUMAN :
  • Belongs to the TCP-1 chaperonin family.
Family:
  • Belongs to the TCP-1 chaperonin family.
genes like me logo Genes that share domains with CCT8L1P: view

No data available for Gene Families for CCT8L1P Gene

Function for CCT8L1P Gene

Molecular function for CCT8L1P Gene

UniProtKB/Swiss-Prot Function:
Possible molecular chaperone; assists the folding of proteins upon ATP hydrolysis.

Gene Ontology (GO) - Molecular Function for CCT8L1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005524 ATP binding IEA --
GO:0044183 protein binding involved in protein folding IBA --
GO:0051082 unfolded protein binding IBA --
genes like me logo Genes that share ontologies with CCT8L1P: view

Phenotypes for CCT8L1P Gene

GenomeRNAi human phenotypes for CCT8L1P:
genes like me logo Genes that share phenotypes with CCT8L1P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT8L1P Gene

Localization for CCT8L1P Gene

Subcellular locations from UniProtKB/Swiss-Prot for CCT8L1P Gene

Cytoplasm.

Gene Ontology (GO) - Cellular Components for CCT8L1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005832 chaperonin-containing T-complex IBA --
genes like me logo Genes that share ontologies with CCT8L1P: view

No data available for Subcellular locations from COMPARTMENTS for CCT8L1P Gene

Pathways & Interactions for CCT8L1P Gene

SuperPathways for CCT8L1P Gene

No Data Available

Interacting Proteins for CCT8L1P Gene

Gene Ontology (GO) - Biological Process for CCT8L1P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006458 de novo protein folding IBA --
GO:0061077 chaperone-mediated protein folding IBA --
genes like me logo Genes that share ontologies with CCT8L1P: view

No data available for Pathways by source and SIGNOR curated interactions for CCT8L1P Gene

Drugs & Compounds for CCT8L1P Gene

No Compound Related Data Available

Transcripts for CCT8L1P Gene

mRNA/cDNA for CCT8L1P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCT8L1P Gene

No ASD Table

Relevant External Links for CCT8L1P Gene

GeneLoc Exon Structure for
CCT8L1P
ECgene alternative splicing isoforms for
CCT8L1P

Expression for CCT8L1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCT8L1P Gene

mRNA differential expression in normal tissues according to GTEx for CCT8L1P Gene

This gene is overexpressed in Testis (x6.6).

Protein differential expression in normal tissues from HIPED for CCT8L1P Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CCT8L1P Gene



Protein tissue co-expression partners for CCT8L1P Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CCT8L1P Gene:

CCT8L1P
genes like me logo Genes that share expression patterns with CCT8L1P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT8L1P Gene

Orthologs for CCT8L1P Gene

Evolution for CCT8L1P Gene

ENSEMBL:
Gene Tree for CCT8L1P (if available)
TreeFam:
Gene Tree for CCT8L1P (if available)

No data available for Orthologs for CCT8L1P Gene

Paralogs for CCT8L1P Gene

(2) SIMAP similar genes for CCT8L1P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CCT8L1P: view

No data available for Paralogs for CCT8L1P Gene

Variants for CCT8L1P Gene

Sequence variations from dbSNP and Humsavar for CCT8L1P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs12672139 --
rs6953943 --
rs6969304 --

Relevant External Links for CCT8L1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT8L1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT8L1P Gene

Disorders for CCT8L1P Gene

No disorders were found for CCT8L1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT8L1P Gene

Publications for CCT8L1P Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4 64
  2. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64

Products for CCT8L1P Gene

Sources for CCT8L1P Gene

Content
Loading form....