Aliases for CCT8L1P Gene
Aliases for CCT8L1P Gene
External Ids for CCT8L1P Gene
- HGNC: 32153
- Entrez Gene: 155100
- Ensembl: ENSG00000020219
- UniProtKB: A6NM43
Previous HGNC Symbols for CCT8L1P Gene
- CCT8L1
Previous GeneCards Identifiers for CCT8L1P Gene
- GC07P152143
Summaries for CCT8L1P Gene
GeneCards Summary for CCT8L1P Gene
CCT8L1P (Chaperonin Containing TCP1 Subunit 8 Like 1, Pseudogene) is a Pseudogene.
UniProtKB/Swiss-Prot for CCT8L1P Gene
-
Possible molecular chaperone; assists the folding of proteins upon ATP hydrolysis.
No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT8L1P Gene
Genomics for CCT8L1P Gene
Regulatory Elements for CCT8L1P Gene
Enhancers for CCT8L1P Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH07G152459 | 1.1 | Ensembl ENCODE | 0.4 | +14.9 | 14901 | 1.6 | HDAC1 HDGF ATF1 FOXA2 NFIB FEZF1 ZNF766 ZNF366 CREM KDM4B | LINC01003 CCT8L1P |
| GH07G152445 | 0.6 | dbSUPER | 0.7 | +0.5 | 461 | 1.2 | NFIA MIER1 NFIC SMARCA4 POLR2A GABPB1 PRDM4 ZNF558 | RNA5SP250 RPL36AP28 CCT8L1P LINC01003 |
| GH07G152438 | 0.9 | ENCODE dbSUPER | 0.4 | -7.1 | -7127 | 0.2 | SMARCE1 PKNOX1 MAFG ARID1B NFIC ZNF316 SMARCA4 PBX2 NFE2L1 NFE2 | ENSG00000212590 FABP5P3 CCT8L1P |
| GH07G152441 | 0.4 | Ensembl | 0.7 | -3.8 | -3817 | 0.4 | POLR2A | RNA5SP250 RPL36AP28 FABP5P3 CCT8L1P |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CCT8L1P on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for CCT8L1P Gene
- Chromosome:
- 7
- Start:
- 152,445,217 bp from pter
- End:
- 152,447,269 bp from pter
- Size:
- 2,053 bases
- Orientation:
- Plus strand
Genomic View for CCT8L1P Gene
Genes around CCT8L1P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7q36.1 by Ensembl
- 7q36.1 by Entrez Gene
- 7q36.1 by HGNC
CCT8L1P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CCT8L1P Gene
Proteins for CCT8L1P Gene
-
Protein details for CCT8L1P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A6NM43-TCPQL_HUMAN
- Recommended name:
- Putative T-complex protein 1 subunit theta-like 1
- Protein Accession:
- A6NM43
Protein attributes for CCT8L1P Gene
- Size:
- 557 amino acids
- Molecular mass:
- 59514 Da
- Quaternary structure:
- No Data Available
Protein Expression for CCT8L1P Gene
Post-translational modifications for CCT8L1P Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CCT8L1P
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CCT8L1P
- Origene Custom Protein Services for CCT8L1P
- Search GeneTex for Proteins for CCT8L1P
Assay Products
No data available for DME Specific Peptides for CCT8L1P Gene
Domains & Families for CCT8L1P Gene
Protein Domains for CCT8L1P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for CCT8L1P Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
A6NM43- Family:
-
- Belongs to the TCP-1 chaperonin family.
No data available for Gene Families for CCT8L1P Gene
Function for CCT8L1P Gene
Molecular function for CCT8L1P Gene
- UniProtKB/Swiss-Prot Function:
- Possible molecular chaperone; assists the folding of proteins upon ATP hydrolysis.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | -- |
| GO:0044183 | protein binding involved in protein folding | IBA | -- |
| GO:0051082 | unfolded protein binding | IBA | -- |
Phenotypes for CCT8L1P Gene
- GenomeRNAi human phenotypes for CCT8L1P:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCT8L1P
-
- Search ViGene Biosciences for CCT8L1P
CRISPR Products
- Browse CRISPR knockouts for CCT8L1P
miRNA Products
- Search ViGene Biosciences for CCT8L1P
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CCT8L1P
- Browse OriGene Inhibitory RNA Products For CCT8L1P
- Search ViGene Biosciences for CCT8L1P
Clone Products
- GenScript: Custom all cDNA clones Services for CCT8L1P
- VectorBuilder custom plasmid, inducible vectors for CCT8L1P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT8L1P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for CCT8L1P
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT8L1P Gene
Localization for CCT8L1P Gene
Subcellular locations from UniProtKB/Swiss-Prot for CCT8L1P Gene
- Cytoplasm.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005832 | chaperonin-containing T-complex | IBA | -- |
No data available for Subcellular locations from COMPARTMENTS for CCT8L1P Gene
Pathways & Interactions for CCT8L1P Gene
No Data Available
Interacting Proteins for CCT8L1P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006458 | de novo protein folding | IBA | -- |
| GO:0061077 | chaperone-mediated protein folding | IBA | -- |
No data available for Pathways by source and SIGNOR curated interactions for CCT8L1P Gene
Transcripts for CCT8L1P Gene
mRNA/cDNA for CCT8L1P Gene
- (1) REFSEQ mRNAs :
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CCT8L1P
miRNA Products
- Search ViGene Biosciences for CCT8L1P
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CCT8L1P
- Browse OriGene Inhibitory RNA Products For CCT8L1P
- Search ViGene Biosciences for CCT8L1P
Clone Products
- GenScript: Custom all cDNA clones Services for CCT8L1P
- VectorBuilder custom plasmid, inducible vectors for CCT8L1P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT8L1P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CCT8L1P Gene
mRNA differential expression in normal tissues according to GTEx for CCT8L1P Gene
This gene is overexpressed in Testis (x6.6).
This gene is overexpressed in Heart (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for CCT8L1P Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of CCT8L1P Gene:
CCT8L1PPrimer Products
-
OriGene qPCR primer pairs for CCT8L1P
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT8L1P Gene
Orthologs for CCT8L1P Gene
No data available for Orthologs for CCT8L1P Gene
Paralogs for CCT8L1P Gene
(2) SIMAP similar genes for CCT8L1P Gene using alignment to 1 proteins:
No data available for Paralogs for CCT8L1P Gene
Variants for CCT8L1P Gene
| SNP ID | Clin | Chr 07 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs12672139 | -- | ||||
| rs6953943 | -- | ||||
| rs6969304 | -- |
Relevant External Links for CCT8L1P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CCT8L1P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT8L1P Gene
Disorders for CCT8L1P Gene
No disorders were found for CCT8L1P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT8L1P Gene
Publications for CCT8L1P Gene
- The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4 64
- Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
Products for CCT8L1P Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CCT8L1P
- Origene Custom Protein Services for CCT8L1P
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for CCT8L1P
- Browse OriGene Inhibitory RNA Products For CCT8L1P
- OriGene qPCR primer pairs for CCT8L1P
- Browse CRISPR knockouts for CCT8L1P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CCT8L1P
- GenScript: Custom all cDNA clones Services for CCT8L1P
- GenScript Custom Purified and Recombinant Proteins Services for CCT8L1P
- GenScript Custom Assay Services for CCT8L1P
- GenScript Custom overexpressing Cell Line Services for CCT8L1P
- Browse GenScript CRISPR for CCT8L1P
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CCT8L1P
- Browse Sino Biological cDNA Clones
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- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCT8L1P
- VectorBuilder custom plasmid, inducible vectors for CCT8L1P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT8L1P
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CCT8L1P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer