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Aliases for CCT7P2 Gene

Aliases for CCT7P2 Gene

  • Chaperonin Containing TCP1 Subunit 7 Pseudogene 2 2 3 5
  • Chaperonin Containing TCP1, Subunit 7 (Eta) Pseudogene 2 2 3
  • CCT7-1P 3

External Ids for CCT7P2 Gene

Previous GeneCards Identifiers for CCT7P2 Gene

  • GC05M092252
  • GC00U929659
  • GC05M092223

Summaries for CCT7P2 Gene

GeneCards Summary for CCT7P2 Gene

CCT7P2 (Chaperonin Containing TCP1 Subunit 7 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT7P2 Gene

Genomics for CCT7P2 Gene

Regulatory Elements for CCT7P2 Gene

Enhancers for CCT7P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G092884 1.8 VISTA 0.4 +6.1 6136 1.3 CTCF PRDM6 SMARCA4 EP300 ATF2 CCT7P2 LDHBP3
GH05G092907 1.1 Ensembl ENCODE 0.4 -17.5 -17504 2.2 ELF3 FOXA2 ZSCAN4 THRB ZSCAN9 RAD21 RARA FOS CREM JUNB CCT7P2 LINC02058
GH05G092926 1 ENCODE 0.3 -36.6 -36631 1.7 PKNOX1 FOXA2 ATF1 MLX ARID4B DMAP1 ZNF48 FOS ZHX2 MXD4 LINC02058 CCT7P2
GH05G092909 0.6 ENCODE 0.4 -19.0 -18970 0.2 SOX13 GATAD2A CTCF MAZ SMC3 ZNF48 RAD21 KAT8 CCT7P2 LINC02058
GH05G092910 0.6 ENCODE 0.4 -18.8 -18790 0.2 SOX13 GATAD2A CTCF MAZ TEAD4 ZNF48 RAD21 KAT8 SMC3 MAFK CCT7P2 LINC02058
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCT7P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCT7P2 Gene

Chromosome:
5
Start:
92,889,372 bp from pter
End:
92,890,919 bp from pter
Size:
1,548 bases
Orientation:
Minus strand

Genomic View for CCT7P2 Gene

Genes around CCT7P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT7P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCT7P2 Gene

Proteins for CCT7P2 Gene

Post-translational modifications for CCT7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCT7P2 Gene

Domains & Families for CCT7P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCT7P2 Gene

Function for CCT7P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT7P2 Gene

Localization for CCT7P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCT7P2 Gene

Pathways & Interactions for CCT7P2 Gene

SuperPathways for CCT7P2 Gene

No Data Available

Interacting Proteins for CCT7P2 Gene

Gene Ontology (GO) - Biological Process for CCT7P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCT7P2 Gene

Drugs & Compounds for CCT7P2 Gene

No Compound Related Data Available

Transcripts for CCT7P2 Gene

mRNA/cDNA for CCT7P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CCT7P2 Gene

No ASD Table

Relevant External Links for CCT7P2 Gene

GeneLoc Exon Structure for
CCT7P2
ECgene alternative splicing isoforms for
CCT7P2

Expression for CCT7P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCT7P2 Gene

mRNA differential expression in normal tissues according to GTEx for CCT7P2 Gene

This gene is overexpressed in Brain - Cerebellum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of CCT7P2 Gene:

CCT7P2
genes like me logo Genes that share expression patterns with CCT7P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT7P2 Gene

Orthologs for CCT7P2 Gene

Evolution for CCT7P2 Gene

ENSEMBL:
Gene Tree for CCT7P2 (if available)
TreeFam:
Gene Tree for CCT7P2 (if available)

No data available for Orthologs for CCT7P2 Gene

Paralogs for CCT7P2 Gene

No data available for Paralogs for CCT7P2 Gene

Variants for CCT7P2 Gene

Relevant External Links for CCT7P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT7P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT7P2 Gene

Disorders for CCT7P2 Gene

Relevant External Links for CCT7P2

Genetic Association Database (GAD)
CCT7P2

No disorders were found for CCT7P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCT7P2 Gene

Publications for CCT7P2 Gene

  1. Genome-wide association analysis and fine mapping of NT-proBNP level provide novel insight into the role of the MTHFR-CLCN6-NPPA-NPPB gene cluster. (PMID: 21273288) Del Greco M F. … Pramstaller P.P. (Hum. Mol. Genet. 2011) 3 46 64
  2. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D. … Mitchell G.F. (BMC Med. Genet. 2007) 46 64
  4. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for CCT7P2 Gene

Sources for CCT7P2 Gene

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