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Aliases for CCT6P1 Gene

Aliases for CCT6P1 Gene

  • Chaperonin Containing TCP1, Subunit 6 (Zeta) Pseudogene 1 2 3
  • Chaperonin Containing TCP1, Subunit 6A (Zeta 1) Pseudogene 1 2 3
  • Chaperonin Containing TCP1, Subunit 6A Pseudogene 3
  • CCT6-5P 3
  • CCT6AP1 3

External Ids for CCT6P1 Gene

Previous HGNC Symbols for CCT6P1 Gene

  • CCT6AP1

Previous GeneCards Identifiers for CCT6P1 Gene

  • GC07P064853
  • GC07P065220
  • GC07P064553
  • GC07P065224

Summaries for CCT6P1 Gene

GeneCards Summary for CCT6P1 Gene

CCT6P1 (Chaperonin Containing TCP1, Subunit 6 (Zeta) Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT6P1 Gene

Genomics for CCT6P1 Gene

Regulatory Elements for CCT6P1 Gene

Genomic Location for CCT6P1 Gene

Start:
65,751,105 bp from pter
End:
65,763,675 bp from pter
Size:
12,571 bases
Orientation:
Plus strand

Genomic View for CCT6P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCT6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCT6P1 Gene

Proteins for CCT6P1 Gene

Post-translational modifications for CCT6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCT6P1 Gene

Domains for CCT6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCT6P1 Gene

Function for CCT6P1 Gene

miRNA for CCT6P1 Gene

miRTarBase miRNAs that target CCT6P1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for CCT6P1 Gene

Localization for CCT6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCT6P1 Gene

Pathways for CCT6P1 Gene

SuperPathways for CCT6P1 Gene

No Data Available

Interacting Proteins for CCT6P1 Gene

Gene Ontology (GO) - Biological Process for CCT6P1 Gene

None

No data available for Pathways by source for CCT6P1 Gene

Transcripts for CCT6P1 Gene

mRNA/cDNA for CCT6P1 Gene

(5) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CCT6P1 Gene

Chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCT6P1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCT6P1 Gene

No ASD Table

Relevant External Links for CCT6P1 Gene

GeneLoc Exon Structure for
CCT6P1
ECgene alternative splicing isoforms for
CCT6P1

Expression for CCT6P1 Gene

mRNA expression in normal human tissues for CCT6P1 Gene

SOURCE GeneReport for Unigene cluster for CCT6P1 Gene Hs.488399

genes like me logo Genes that share expressions with CCT6P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for CCT6P1 Gene

Orthologs for CCT6P1 Gene

Evolution for CCT6P1 Gene

ENSEMBL:
Gene Tree for CCT6P1 (if available)
TreeFam:
Gene Tree for CCT6P1 (if available)

No data available for Orthologs for CCT6P1 Gene

Paralogs for CCT6P1 Gene

No data available for Paralogs for CCT6P1 Gene

Variants for CCT6P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for CCT6P1 Gene

Variant ID Type Subtype PubMed ID
dgv1147e201 CNV Deletion 23290073
dgv226e55 CNV Loss 17911159
nsv517778 CNV Gain+Loss 19592680
esv2734586 CNV Deletion 23290073
dgv1213e199 CNV Deletion 23128226
dgv2088e1 CNV Complex 17122850
dgv229e55 CNV Loss 17911159
nsv888320 CNV Gain 21882294
dgv2090e1 CNV Complex 17122850
nsv819275 CNV Gain 19587683
nsv436763 CNV Insertion 17901297

Relevant External Links for CCT6P1 Gene

HapMap Linkage Disequilibrium report
CCT6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for CCT6P1 Gene

Disorders for CCT6P1 Gene

No disorders were found for CCT6P1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for CCT6P1 Gene

Publications for CCT6P1 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. An integrated workflow for charting the human interaction proteome: insights into the PP2A system. (PMID: 19156129) Glatter T. … Gstaiger M. (Mol. Syst. Biol. 2009) 3
  5. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3

Products for CCT6P1 Gene

Sources for CCT6P1 Gene

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