Aliases for CCT5P1 Gene
Aliases for CCT5P1 Gene
External Ids for CCT5P1 Gene
- HGNC: 35135
- Entrez Gene: 402226
- Ensembl: ENSG00000250444
Previous GeneCards Identifiers for CCT5P1 Gene
- GC00U923006
- GC05P114847
- GC05P110029
Summaries for CCT5P1 Gene
GeneCards Summary for CCT5P1 Gene
CCT5P1 (Chaperonin Containing TCP1 Subunit 5 Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT5P1 Gene
Genomics for CCT5P1 Gene
Regulatory Elements for CCT5P1 Gene
Enhancers for CCT5P1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH05G115541 | 1.4 | FANTOM5 ENCODE | 10.9 | +31.4 | 31408 | 4.4 | HDGF HNRNPUL1 PKNOX1 FOXA2 CREB3L1 AGO1 ARID4B SIN3A FEZF1 DMAP1 | ENSG00000250015 SEMA6A-AS1 ENSG00000271918 CCT5P1 ATG12 LOC101927100 TICAM2 FEM1C |
| GH05G115507 | 0.5 | ENCODE | 0.7 | -4.2 | -4157 | 1.6 | NFIC NFIB EP300 | TMED7 TMED7-TICAM2 TICAM2 LOC101927100 CCT5P1 ENSG00000249433 |
| GH05G115513 | 0.5 | FANTOM5 | 0.7 | +1.3 | 1331 | 0.3 | NFIC NFIB CEBPB | CCT5P1 FEM1C |
| GH05G115494 | 0.7 | ENCODE | 0.4 | -17.4 | -17379 | 0.2 | MTA2 ZBED1 BACH1 JUNB BMI1 EBF1 DPF2 TBX21 ARID3A JUND | ENSG00000249433 CCT5P1 |
| GH05G115511 | 0.4 | FANTOM5 | 0.7 | 0.0 | -9 | 0.3 | ZNF558 | TICAM2 FEM1C CCT5P1 ENSG00000249433 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around CCT5P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for CCT5P1 Gene
- Chromosome:
- 5
- Start:
- 115,512,077 bp from pter
- End:
- 115,513,697 bp from pter
- Size:
- 1,621 bases
- Orientation:
- Plus strand
Genomic View for CCT5P1 Gene
Genes around CCT5P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 5q22.3 by Ensembl
- 5q22.3 by Entrez Gene
- 5q22.3 by HGNC
CCT5P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CCT5P1 Gene
Proteins for CCT5P1 Gene
Post-translational modifications for CCT5P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for CCT5P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CCT5P1
- Origene Custom Protein Services for CCT5P1
- Search GeneTex for Proteins for CCT5P1
Assay Products
No data available for DME Specific Peptides for CCT5P1 Gene
Domains & Families for CCT5P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCT5P1 Gene
Function for CCT5P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCT5P1
-
- Search ViGene Biosciences for CCT5P1
CRISPR Products
- Browse CRISPR knockouts for CCT5P1
miRNA Products
- Search ViGene Biosciences for CCT5P1
Inhibitory RNA Products
- Search ViGene Biosciences for CCT5P1
Clone Products
- GenScript: Custom all cDNA clones Services for CCT5P1
- VectorBuilder custom plasmid, inducible vectors for CCT5P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT5P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for CCT5P1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT5P1 Gene
Localization for CCT5P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCT5P1 Gene
Transcripts for CCT5P1 Gene
mRNA/cDNA for CCT5P1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for CCT5P1
miRNA Products
- Search ViGene Biosciences for CCT5P1
Inhibitory RNA Products
- Search ViGene Biosciences for CCT5P1
Clone Products
- GenScript: Custom all cDNA clones Services for CCT5P1
- VectorBuilder custom plasmid, inducible vectors for CCT5P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT5P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for CCT5P1 Gene
NURSA nuclear receptor signaling pathways regulating expression of CCT5P1 Gene:
CCT5P1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT5P1 Gene
Orthologs for CCT5P1 Gene
No data available for Orthologs for CCT5P1 Gene
Paralogs for CCT5P1 Gene
No data available for Paralogs for CCT5P1 Gene
Variants for CCT5P1 Gene
Relevant External Links for CCT5P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CCT5P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT5P1 Gene
Disorders for CCT5P1 Gene
No disorders were found for CCT5P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT5P1 Gene
Publications for CCT5P1 Gene
- Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
Products for CCT5P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CCT5P1
- Origene Custom Protein Services for CCT5P1
- Browse OriGene Inhibitory RNA Products For CCT5P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CCT5P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CCT5P1
- GenScript: Custom all cDNA clones Services for CCT5P1
- GenScript Custom Purified and Recombinant Proteins Services for CCT5P1
- GenScript Custom Assay Services for CCT5P1
- GenScript Custom overexpressing Cell Line Services for CCT5P1
- Browse GenScript CRISPR for CCT5P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for CCT5P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for CCT5P1
- VectorBuilder custom plasmid, inducible vectors for CCT5P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for CCT5P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for CCT5P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer