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CCT4P1 Gene(Pseudogene)

Chaperonin Containing TCP1 Subunit 4 Pseudogene 1

GCID:
GC07M140997
GIFtS:
13
Genes Participants
UDN Logo

Aliases for CCT4P1 Gene

Aliases for CCT4P1 Gene

  • Chaperonin Containing TCP1 Subunit 4 Pseudogene 1 2 3 5
  • Chaperonin Containing TCP1, Subunit 4 (Delta) Pseudogene 1 2 3
  • CCT4-2P 3

External Ids for CCT4P1 Gene

Previous GeneCards Identifiers for CCT4P1 Gene

  • GC00U922978
  • GC07M140698
  • GC07M134993

Summaries for CCT4P1 Gene

GeneCards Summary for CCT4P1 Gene

CCT4P1 (Chaperonin Containing TCP1 Subunit 4 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT4P1 Gene

Genomics for CCT4P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for CCT4P1 Gene

Enhancers for CCT4P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G141001 0.8 ENCODE 0.7 -3.3 -3318 2.4 BCOR SOX13 HNRNPUL1 TFAP4 PKNOX1 MLX ZNF133 MAX RAD21 RARA TMEM178B MRPS33 NDUFB2-AS1 NDUFB2 CCT4P1
GH07G141013 1.2 ENCODE 0.4 -14.5 -14532 2.6 CREB3L1 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 MEF2D GLIS1 TMEM178B BRAF NDUFB2-AS1 NDUFB2 MRPS33 CCT4P1
GH07G141012 1 Ensembl ENCODE 0.4 -12.6 -12591 0.4 CTCF PKNOX1 CBX3 SAP130 TBL1XR1 ARID4B SIN3A ZNF384 ZNF2 RAD21 BRAF NDUFB2-AS1 NDUFB2 MRPS33 CCT4P1
GH07G140972 1.1 ENCODE 0.3 +26.5 26504 1.7 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT ARID4B SIN3A DMAP1 FEZF1 BRAF TMEM178B TAS2R6P NDUFB2 NDUFB2-AS1 TAS2R5 CCT4P1 LOC105375536
GH07G140975 1 ENCODE 0.3 +23.5 23488 1.4 ATF1 FOXA2 PKNOX1 ARID4B FEZF1 ZHX2 NCOA1 REST PPARG TBX21 TMEM178B BRAF NDUFB2 NDUFB2-AS1 CCT4P1 LOC105375536
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCT4P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCT4P1 Gene

Chromosome:
7
Start:
140,997,744 bp from pter
End:
140,999,800 bp from pter
Size:
2,057 bases
Orientation:
Minus strand

Genomic View for CCT4P1 Gene

Genes around CCT4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT4P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CCT4P1 Gene

Proteins for CCT4P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CCT4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCT4P1 Gene

Domains & Families for CCT4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCT4P1 Gene

Function for CCT4P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT4P1 Gene

Localization for CCT4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCT4P1 Gene

Pathways & Interactions for CCT4P1 Gene

SuperPathways for CCT4P1 Gene

PathCards logo More details on SuperPathways for CCT4P1
No Data Available

Interacting Proteins for CCT4P1 Gene

Gene Ontology (GO) - Biological Process for CCT4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCT4P1 Gene

Drugs & Compounds for CCT4P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CCT4P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for CCT4P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCT4P1 Gene

No ASD Table

Relevant External Links for CCT4P1 Gene

GeneLoc Exon Structure for
CCT4P1
ECgene alternative splicing isoforms for
CCT4P1

Expression for CCT4P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCT4P1 Gene

mRNA expression in normal human tissues for CCT4P1 Gene
mRNA expression by GTEx for CCT4P1 Gene

mRNA differential expression in normal tissues according to GTEx for CCT4P1 Gene

This gene is overexpressed in Testis (x44.9).

NURSA nuclear receptor signaling pathways regulating expression of CCT4P1 Gene:

CCT4P1
genes like me logo Genes that share expression patterns with CCT4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT4P1 Gene

Orthologs for CCT4P1 Gene

Evolution for CCT4P1 Gene

ENSEMBL:
Gene Tree for CCT4P1 (if available)
TreeFam:
Gene Tree for CCT4P1 (if available)

No data available for Orthologs for CCT4P1 Gene

Paralogs for CCT4P1 Gene

No data available for Paralogs for CCT4P1 Gene

Variants for CCT4P1 Gene

Relevant External Links for CCT4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT4P1 Gene

Disorders for CCT4P1 Gene

No disorders were found for CCT4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CCT4P1 Gene

Publications for CCT4P1 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 64

Products for CCT4P1 Gene

Sources for CCT4P1 Gene

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