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CCT3P1 Gene(Pseudogene)

Chaperonin Containing TCP1 Subunit 3 Pseudogene 1

GCID:
GC08P016275
GIFtS:
14
Genes Participants
UDN Logo

Aliases for CCT3P1 Gene

Subcategory (RNA class) for CCT3P1 Gene

lncRNA

Aliases for CCT3P1 Gene

  • Chaperonin Containing TCP1 Subunit 3 Pseudogene 1 2 3
  • Chaperonin Containing TCP1, Subunit 3 (Gamma) Pseudogene 1 2 3
  • RP11-447G11.1 5
  • CCT3-1P 3

External Ids for CCT3P1 Gene

ORGUL Members for CCT3P1 Gene

Previous GeneCards Identifiers for CCT3P1 Gene

  • GC00U922948
  • GC08P016133

Summaries for CCT3P1 Gene

GeneCards Summary for CCT3P1 Gene

CCT3P1 (Chaperonin Containing TCP1 Subunit 3 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCT3P1 Gene

Genomics for CCT3P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for CCT3P1 Gene

Enhancers for CCT3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G016283 0.5 ENCODE 0.4 +8.8 8772 2.1 TEAD4 POU5F1 RBBP5 CHD7 CCT3P1 GC08P016314
GH08G016264 0.4 ENCODE 0.4 -10.8 -10777 1.6 MAFK NFE2L2 CCT3P1 GC08M016126
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around CCT3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for CCT3P1 Gene

Chromosome:
8
Start:
16,275,677 bp from pter
End:
16,276,296 bp from pter
Size:
620 bases
Orientation:
Plus strand

Genomic View for CCT3P1 Gene

Genes around CCT3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CCT3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CCT3P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CCT3P1 Gene

Proteins for CCT3P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CCT3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CCT3P1 Gene

Domains & Families for CCT3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CCT3P1 Gene

Function for CCT3P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CCT3P1 Gene

Localization for CCT3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for CCT3P1 Gene

Pathways & Interactions for CCT3P1 Gene

SuperPathways for CCT3P1 Gene

PathCards logo More details on SuperPathways for CCT3P1
No Data Available

Interacting Proteins for CCT3P1 Gene

Gene Ontology (GO) - Biological Process for CCT3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CCT3P1 Gene

Drugs & Compounds for CCT3P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CCT3P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for CCT3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCT3P1 Gene

No ASD Table

Relevant External Links for CCT3P1 Gene

GeneLoc Exon Structure for
CCT3P1
ECgene alternative splicing isoforms for
CCT3P1

Expression for CCT3P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CCT3P1 Gene

mRNA expression in normal human tissues for CCT3P1 Gene
mRNA expression by GTEx for CCT3P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CCT3P1 Gene:

CCT3P1
genes like me logo Genes that share expression patterns with CCT3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CCT3P1 Gene

Orthologs for CCT3P1 Gene

Evolution for CCT3P1 Gene

ENSEMBL:
Gene Tree for CCT3P1 (if available)
TreeFam:
Gene Tree for CCT3P1 (if available)

No data available for Orthologs for CCT3P1 Gene

Paralogs for CCT3P1 Gene

No data available for Paralogs for CCT3P1 Gene

Variants for CCT3P1 Gene

Relevant External Links for CCT3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CCT3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CCT3P1 Gene

Disorders for CCT3P1 Gene

Relevant External Links for CCT3P1

Genetic Association Database (GAD)
CCT3P1

No disorders were found for CCT3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CCT3P1 Gene

Publications for CCT3P1 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for CCT3P1 Gene

Sources for CCT3P1 Gene

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