Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CCR3 Gene

protein-coding   GIFtS: 66
GCID: GC03P046227

chemokine (C-C motif) receptor 3


(Previous symbol: CMKBR3)
 Explore 92 diseases affiliated with
CCR3 via our new
 Human Malady Compendium 
Biological research products
for CCR3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Chemokine (C-C Motif) Receptor 31 2     C-C CKR-32 3
CKR31 2 3 5     B-Chemokine Receptor2
CMKBR31 2 3 5     C-C Chemokine Receptor Type 32
CC-CKR-31 2 3     CC Chemokine Receptor 32
CD1931 2     Eosinophil CC Chemokine Receptor 32
Eosinophil Eotaxin Receptor2 3     CD193 Antigen3
CCR-32 3     

External Ids:    HGNC: 16041   Entrez Gene: 12322   Ensembl: ENSG000001836257   OMIM: 6012685   UniProtKB: P516773   

Export aliases for CCR3 gene to outside databases

Previous GC identifers: GC03P045547 GC03P046024 GC03P046244


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CCR3:
The protein encoded by this gene is a receptor for C-C type chemokines. It belongs to family 1 of the G protein-coupled
receptors. This receptor binds and responds to a variety of chemokines, including eotaxin (CCL11), eotaxin-3 (CCL26),
MCP-3 (CCL7), MCP-4 (CCL13), and RANTES (CCL5). It is highly expressed in eosinophils and basophils, and is also
detected in TH1 and TH2 cells, as well as in airway epithelial cells. This receptor may contribute to the accumulation
and activation of eosinophils and other inflammatory cells in the allergic airway. It is also known to be an entry
co-receptor for HIV-1. This gene and seven other chemokine receptor genes form a chemokine receptor gene cluster on
the chromosomal region 3p21. Alternatively spliced transcript variants have been described. (provided by RefSeq, Sep
2009)

UniProtKB/Swiss-Prot: CCR3_HUMAN, P51677
Function: Receptor for a C-C type chemokine. Binds to eotaxin, eotaxin-3, MCP-3, MCP-4, RANTES and MIP-1 delta.
Subsequently transduces a signal by increasing the intracellular calcium ions level. Alternative coreceptor with CD4
for HIV-1 infection

summary for CCR3:
Chemokines (chemotactic cytokines) belong to a family of chemoattractant molecules involved in the directed
migration of immune cells. Over fifty human chemokines have been identified that can be categorised into
four groups; CC, CXC, CX3C and C (XCL1 and XCL2); depending on the spacing of their first two cysteine
residues. Chemokines exert their effects by binding to G-protein-coupled chemokine receptors on the surface
of cells, predominantly leukocytes. Eighteen human chemokine receptors have been identified that are
classified according to the class of chemokines that they bind. The major function of chemokines is to
regulate leukocyte trafficking in hematopoiesis and in innate and adaptive immunity. Other functions include
angiogenic activity, apoptosis, T-cell differentiation and phagocyte activation. Inadvertent activation of
chemokine receptors leads to autoimmunity by inappropriately targeting self antigens for destruction by
cytotoxic T-cells and macrophages.

Gene Wiki entry for CCR3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_022517.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CCR3 gene promoter:
         STAT5B   AML1a   GCNF   ATF-2   C/EBPalpha   AREB6   c-Jun   Ik-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidCCR3 promoter sequence
   Search SABiosciences Chromatin IP Primers for CCR3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCR3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3p21.3   Ensembl cytogenetic band:  3p21.31   HGNC cytogenetic band: 3p21.3

CCR3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CCR3 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P046227:  view genomic region     (about GC identifiers)

Start:
46,205,096 bp from pter      End:
46,308,197 bp from pter
Size:
103,102 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CCR3_HUMAN, P51677 (See protein sequence)
Recommended Name: C-C chemokine receptor type 3  
Size: 355 amino acids; 41044 Da
Subunit: Binds to HIV-1 Tat
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: Overexpression of CCR3 together with its ligands appears to be a characteristic of ulcerative colitis
(UC). The production of CCR3 ligands by human colonic epithelial cells suggests further that the epithelium can play a
role in modulating pathological T-cell-mediated mucosal inflammation (PubMed:21077277)
Secondary accessions: B3KVQ1 Q15748 Q2YDB9 Q86WD2 Q9ULY8

Explore the universe of human proteins at neXtProt for CCR3: NX_P51677

CCR3 Protein expression data from MOPED and PaxDb:    About this image 
CCR3 Protein Expression

REFSEQ proteins (4 alternative transcripts): 
NP_001158152.1  NP_001828.1  NP_847898.1  NP_847899.1  

ENSEMBL proteins: 
 ENSP00000350003   ENSP00000379271   ENSP00000389336   ENSP00000401822   ENSP00000379273  
 ENSP00000441600   ENSP00000440097  
Reactome Protein details: P51677
Human Recombinant Protein Products for CCR3: 
Browse Purified and Recombinant Proteins at EMD Millipore
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
OriGene Protein Over-expression Lysate: CCR3
OriGene Custom Protein Services for CCR3 
GenScript Custom Purified and Recombinant Proteins Services for CCR3
Novus Biologicals CCR3 Proteins
Novus Biologicals CCR3 Lysate
Browse Sino Biological Recombinant Proteins
Browse ProSpec Recombinant Proteins
Uscn Proteins for CCR3

Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005615extracellular space ----
GO:0005768endosome ----
GO:0005886plasma membrane TAS--
GO:0005887integral to plasma membrane TAS9302298
GO:0016021integral to membrane ----

CCR3 for ontologies           About GeneDecksing



CCR3 Antibody Products: 
Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
R&D Systems Antibodies for CCR3
OriGene Antibodies (see all 3): CCR3
OriGene Custom Antibody Services for CCR3 
GenScript Superior Antibodies for CCR3
Novus Biologicals CCR3 Antibodies
Abcam antibodies for CCR3 
Uscn Antibodies for CCR3
ThermoFisher Antibodies for CCR3

Assay Products for CCR3: 
Browse Kits and Assays available from EMD Millipore
OriGene Custom Immunoassay Development
Browse OriGene Fluorogenic Cell Assay Kits
Browse R&D Systems for biochemical assays
GenScript Custom Assay Services for CCR3
Browse Enzo Life Sciences for kits & assays
Uscn ELISAs and CLIAs for CCR3


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

CCR3 for domains           About GeneDecksing

4 InterPro domains/families:
 IPR017452 GPCR_Rhodpsn_7TM
 IPR002238 Chemokine_CCR3
 IPR000355 Chemokine_rcpt
 IPR000276 GPCR_Rhodpsn

Graphical View of Domain Structure for InterPro Entry P51677

ProtoNet protein and cluster: P51677

2 Blocks protein families:
IPB000355 Chemokine receptor signature
IPB002238 C-C chemokine receptor type 3 signature


UniProtKB/Swiss-Prot: CCR3_HUMAN, P51677
Similarity: Belongs to the G-protein coupled receptor 1 family


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Molecular Function:

     UniProtKB/Swiss-Prot Summary: CCR3_HUMAN, P51677
Function: Receptor for a C-C type chemokine. Binds to eotaxin, eotaxin-3, MCP-3, MCP-4, RANTES and MIP-1 delta.
Subsequently transduces a signal by increasing the intracellular calcium ions level. Alternative coreceptor with CD4
for HIV-1 infection

     Genatlas biochemistry entry for CCR3:
chemokine CC,beta,receptor 3,expressed in eosinophil,basophil and T helper 2 cell,G protein coupled receptor
superfamily,expressed by the thymocytes for the mobilization of lymphocytes within and from the thymus

     Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0004950chemokine receptor activity TAS10415069
GO:0005515protein binding ----
GO:0016493C-C chemokine receptor activity IEA--
     
CCR3 for ontologies           About GeneDecksing


Phenotypes:
     1 GenomeRNAi human phenotype for CCR3:
 Increased G1 DNA content 

     5 MGI mutant phenotypes (inferred from 1 allele(MGI details for Ccr3):
 cellular  hematopoietic system  homeostasis/metabolism  immune system  respiratory system 

CCR3 for phenotypes           About GeneDecksing

Animal Models:
     Mouse knock-out Ccr3tm1Cge for CCR3
   inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CCR3 

miRNA
Products:
    
Browse 3'-UTR reporter clones for miRNA target validation
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CCR3
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CCR3
SwitchGear 3'UTR luciferase reporter plasmidCCR3 3' UTR sequence
Inhib. RNA
Products:
    
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CCR3 (see all 7)
OriGene shRNA RFP: CCR3
OriGene siRNA: CCR3
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CCR3
Sirion Biotech Custom design and validation of potent shRNA sequences against CCR3 

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for CCR3
Sirion Biotech Customized adenovirus for overexpression of CCR3 
Sirion Biotech Customized adenovirus for potent knockdown of CCR3

Clone
Products:
     
Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3 (see all 6)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3 (see all 4)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector (see all 4): CCR3 (NM_001164680)
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for CCR3
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CCR3 

Cell Line
Products:
     
GenScript Custom overexpressing Cell Line Services for CCR3
Search LifeMap BioReagents cell lines for CCR3
Sirion Biotech Customized stable knockdown cell line services for CCR3 
Sirion Biotech Customized inducible knockdown cell line services for CCR3
Sirion Biotech Customized stable overexpressing cell line services for CCR3
Sirion Biotech Customized inducible overexpressing cell line services for CCR3

In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CCR3


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/12 super-pathways (see all 12About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1Class A/1 (Rhodopsin-like receptors)
Class A/1 (Rhodopsin-like receptors)1.00
G alpha (i) signalling events0.44
GPCR ligand binding0.75
GPCRs, Class A Rhodopsin-like0.41
Peptide ligand-binding receptors0.61
2Akt Signaling
Akt Signaling1.00
Tec Kinases Signaling0.55
p38 Signaling0.60
3Signaling by GPCR
Signaling by GPCR1.00
Signal Transduction0.56
GPCR downstream signaling0.89
4Immune response _CCR3 signaling in eosinophils
Immune response _CCR3 signaling in eosinophils1.00
Immune response CCR3 signaling in eosinophils1.00
5Neuropeptides signaling through G-protein alpha-i & G-protein alpha-q
Neuropeptides signaling through G-protein alpha-i & G-protein alpha-q1.00
Peptide GPCRs0.46

Pathway sources
See GeneCards unified pathways
Show all pathways

2 EMD Millipore Pathways for CCR3
    Neuropeptides signaling through G-protein alpha-i & G-protein alpha-q
Immune response CCR3 signaling in eosinophils

5/9 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CCR3 (see all 9)
    Chemokine Signaling
STAT3 Pathway
Molecular Mechanisms of Cancer
Antioxidant Action of Vitamin-C
Tec Kinases Signaling

1 GeneGo (Thomson Reuters) Pathway for CCR3
    Immune response CCR3 signaling in eosinophils

2 BioSystems Pathways for CCR3 
    GPCRs, Class A Rhodopsin-like
Peptide GPCRs

5/8        Reactome Pathways for CCR3 (see all 8)
    GPCR downstream signaling
Peptide ligand-binding receptors
Chemokine receptors bind chemokines
Signal Transduction
Signaling by GPCR


2         Kegg Pathways  (Kegg details for CCR3):
    Cytokine-cytokine receptor interaction
Chemokine signaling pathway


CCR3 for pathways           About GeneDecksing

Interactions:

    SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CCR3

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/188 Interacting proteins for CCR3 (P516773 ENSP000003500034) via UniProtKB, MINT, STRING, and/or I2D (see all 188)
InteractantInteraction Details
GeneCardExternal ID(s)
CCL3L3P166193, ENSP000003676054I2D: score=4 STRING: ENSP00000367605
CCL3L1P166193I2D: score=4 
CCL11P516713, ENSP000003022344I2D: score=3 STRING: ENSP00000302234
CCL7P800983, ENSP000002003074I2D: score=3 STRING: ENSP00000200307
CCL2P135003, ENSP000002258314I2D: score=2 STRING: ENSP00000225831
About this table

Gene Ontology (GO): 5/14 biological process terms (GO ID links to tree view) (see all 14):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0001938positive regulation of endothelial cell proliferation ----
GO:0002551mast cell chemotaxis ----
GO:0006935chemotaxis TAS10201960
GO:0006954inflammatory response TAS9302298
GO:0006968cellular defense response TAS10713092

CCR3 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

CCR3 for compounds           About GeneDecksing

Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Compounds for CCR3 available from Tocris Bioscience    About this table
CompoundAction CAS #
SB 297006Potent and selective CCR3 antagonist[58816-69-6]
SB 328437Potent and selective CCR3 antagonist[247580-43-4]
UCB 35625Potent CCR1 and CCR3 antagonist[301648-08-8]

1 HMDB Compound for CCR3    About this table
CompoundSynonyms CAS #PubMed Ids
CalciumCa (see all 2)7440-70-2--
10/33 Novoseek chemical compound relationships for CCR3 gene (see all 33)    About this table
Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
rantes 91.1 115 15948978 (6), 11404385 (4), 11240271 (4), 10570327 (3) (see all 68)
tarc 78.6 5 9500790 (1), 16237112 (1), 16634894 (1), 12009564 (1) (see all 5)
ccl3 69.1 3 11145678 (1), 15588486 (1), 18492752 (1)
mcp 1 46.7 1 15607028 (1)
calcium 46.3 38 18699931 (2), 12532103 (2), 11449371 (2), 8955214 (1) (see all 28)
piperidine 44.3 2 17951061 (1), 14505678 (1)
ccl4 35.7 3 17133532 (1), 11145678 (1), 14607956 (1)
histamine 28.5 1 15965235 (1)
herbimycin a 18.6 5 10704057 (1), 10527858 (1)
ltd4 9.53 2 9365122 (1), 11408763 (1)

Search CenterWatch for drugs/clinical trials and news about CCR3 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for CCR3 gene (4 alternative transcripts): 
NM_001164680.1  NM_001837.3  NM_178328.1  NM_178329.2  

Unigene Cluster for CCR3:

Chemokine (C-C motif) receptor 3
Hs.506190  [show with all ESTs]
Unigene Representative Sequence: NM_001837
9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000357422(uc003cpg.2) ENST00000395940 ENST00000452454 ENST00000457243
ENST00000484025 ENST00000475150 ENST00000395942(uc021wwz.1) ENST00000545097(uc003cpk.2 uc010hjb.2 uc003cpj.2 uc003cpl.2)
ENST00000541018(uc003cpi.2)

miRNA
Products:
     
Browse 3'-UTR reporter clones for miRNA target validation
Browse OriGene MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CCR3
Search QIAGEN for miScript miRNA Assays for microRNAs that regulate CCR3
SwitchGear 3'UTR luciferase reporter plasmidCCR3 3' UTR sequence
Inhib. RNA
Products:
     
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CCR3 (see all 7)
OriGene shRNA RFP: CCR3
OriGene siRNA: CCR3
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CCR3
Sirion Biotech Custom design and validation of potent shRNA sequences against CCR3 
Clone
Products:
     
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3 (see all 6)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3 (see all 4)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector (see all 4): CCR3 (NM_001164680)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for CCR3
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CCR3 
Primer
Products:
    
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CCR3
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CCR3
  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CCR3
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CCR3

Additional cDNA sequence: 

AF026535.1 AF224495.1 AF262299.1 AF262300.1 AF262301.1 AF262302.1 AF262303.1 AF262304.1 
BC110297.1 BC130318.1 BC130320.1 U28694.1 

4 DOTS entries:

DT.95360233  DT.307767  DT.97836291  DT.101976174 

19 AceView cDNA sequences:

BC033514 AF262303 AF262302 U28694 AF224495 NM_001837 AF026535 NM_178329 
AF262299 BG205056 BI821796 AF262304 BG182330 BG204024 AF262300 AK123050 
BI906283 AF262301 BG460984 

GeneLoc Exon Structure

5/6 Alternative Splicing Database (ASD) splice patterns (SP) for CCR3 (see all 6)    About this scheme

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6a · 6b · 6c
SP1:                    -     -     -     -     -                     
SP2:                                -     -     -                     
SP3:                          -     -           -                     
SP4:                          -     -     -     -                     
SP5:                          -     -                                 


ECgene alternative splicing isoforms for CCR3

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

CCR3 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CTGTGTTTGC
CCR3 Expression
About this image
See CCR3 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for CCR3

SOURCE GeneReport for Unigene cluster: Hs.506190

UniProtKB/Swiss-Prot: CCR3_HUMAN, P51677
Tissue specificity: In eosinophils as well as trace amounts in neutrophils and monocytes

    SABiosciences Expression via Pathway-Focused PCR Arrays including CCR3 (see all 11): 
          HIV Host Response in human mouse rat
          Inflammatory Response & Autoimmunity in human mouse rat
          T-cell & B-cell Activation in human mouse rat
          Inflammatory Response & Autoimmunity 384HT in human mouse rat
          G Protein Coupled Receptors 384HT in human mouse rat

Primer
Products:
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CCR3
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat CCR3
QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CCR3
QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CCR3
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CCR3

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for CCR3 gene from 3/10 species (see all 10)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
chicken
(Gallus gallus)
Aves F1NPK8_CHICK6
F1NPK9_CHICK6
chemokine (C-C motif) receptor 5
50(a)
49(a)
many ↔ many
many ↔ many
2(42699264-42700328)
2(42682320-42683396)
lizard
(Anolis carolinensis)
Reptilia --
--
--
48(a)
48(a)
many ↔ many
many ↔ many
GL343324.1(443935-445008)
GL343324.1(448159-449136)
zebrafish
(Danio rerio)
Actinopterygii ccr8.16
CU467889.16
(see all 3)
--
35(a)
35(a)
(see all 3)
many ↔ many
many ↔ many
(see all 3)
16(10749803-10752840)
16(11002252-11005272)


ENSEMBL Gene Tree for CCR3 (if available)
TreeFam Gene Tree for CCR3 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for CCR3 gene
CCR62  CCR52  CXCR62  CXCR32  XCR12  CCR92  CCBP22  CCRL22  
CCR72  CX3CR12  CCR82  CXCR22  CCRL12  CCR42  CCR12  CXCR12  
CCR22  CXCR52  CCR102  CXCR42  
18/61 SIMAP similar genes for CCR3 using alignment to 9 protein entries:     CCR3_HUMAN (see all proteins) (see all similar genes):
CCR-5    CCR1    CCR5    CCR2    CCRL2    GHSR
CCR4    CX3CR1    CCR8    GPR34    NMBR    CCR7
NPBWR2    OPRM1    GPR18    GPR1    CXCR2    IL8RB

CCR3 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/587 NCBI SNPs in CCR3 are shown (see all 587    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 3 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs1922934801,2
--46281982(+) TCCCTC/TGGGCC 4 -- us2k10--------
rs575093591,2
C--46282127(+) TGAGTG/TGCTGC 4 -- us2k12Minor allele frequency- T:0.03WA 120
rs1840817101,2
--46282164(+) TGACAA/GCTATG 4 -- us2k10--------
rs98427161,2
C,F,A,H--46282174(+) GATAAG/ATATTT 4 -- us2k119Minor allele frequency- A:0.38NS EA NA MN WA CSA 1182
rs1885437001,2
--46282186(+) CATGAC/TGCTGT 4 -- us2k10--------
rs98426071,2
C,H--46282270(+) tgctaC/Tatcat 4 -- us2k15Minor allele frequency- T:0.00NS EA CSA 420
rs578719241,2
C,F--46282278(+) CATTTT/AGCAGT 4 -- us2k16Minor allele frequency- A:0.16NA WA EA 364
rs126366511,2
C,F,H--46282391(+) TGAGAT/CCTTAC 4 -- us2k121Minor allele frequency- C:0.41NS EA NA WA CSA 2350
rs1499739121,2
--46282405(+) CAGTCA/GAAAAT 4 -- us2k10--------
rs1442441721,2
--46282467(+) AGTGAA/GATGTT 4 -- us2k10--------

HapMap Linkage Disequilibrium report for CCR3 (46205096 - 46308197 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
      Database of Genomic Variants (DGV) variations for CCR3: --
Human Gene Mutation Database (HGMD): CCR3

SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CCR3
DNA2.0 Custom Variant and Variant Library Synthesis for CCR3

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

CCR3 for disorders           About GeneDecksing

OMIM gene information: 601268    OMIM disorders: --

20/92 diseases for CCR3 (see all 92):    About MalaCards
erdheim-chester disease    toxic epidermal necrolysis    stevens-johnson syndrome    aids dementia complex
hematopoiesis    age related macular degeneration    human immunodeficiency virus infectious disease    lymphomatoid papulosis
mycosis fungoides    gastroesophageal reflux disease    allergic rhinitis    erythema multiforme
severe combined immunodeficiency    pulmonary eosinophilia    wegener's granulomatosis    optic neuritis
macular degeneration    bullous pemphigoid    chronic obstructive pulmonary disease    eosinophilia

5 diseases from the University of Copenhagen DISEASES database for CCR3:
Asthma     Eosinophilia     Hypersensitivity reaction type I disease     Atopic dermatitis
Allergic rhinitis

10/48 Novoseek disease relationships for CCR3 gene (see all 48)    About this table

Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
immunodeficiency 65.1 28 9573273 (2), 9343175 (2), 17041228 (2), 19218218 (2) (see all 19)
asthma 63.9 56 17845580 (4), 14561201 (3), 11307756 (2), 11060659 (2) (see all 39)
inflammation 60.7 46 20144207 (3), 16889234 (2), 12009564 (2), 7622448 (1) (see all 33)
eosinophilia 54.4 7 17983872 (2), 14698143 (1), 18699933 (1), 10708591 (1) (see all 5)
aids dementia complex 52.7 1 11115360 (1)
asthma allergic 45.1 6 15322211 (1), 9893192 (1), 17929797 (1), 19960358 (1) (see all 6)
airways disease 43.7 4 14698143 (1), 19637977 (1), 17350279 (1)
dermatitis atopic 42.4 13 10417617 (4), 15948978 (2), 16045735 (1), 14581140 (1) (see all 8)
allergic rhinitis 42.3 6 20144207 (2), 16623955 (1), 17156343 (1), 10529603 (1) (see all 5)
allergy 40.2 11 20082620 (2), 14561201 (2), 14561176 (2), 17845580 (1) (see all 7)

Genetic Association Database (GAD): CCR3
Human Genome Epidemiology (HuGE) Navigator: CCR3 (45 documents)

Export disorders for CCR3 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for CCR3 gene, integrated from 9 sources (see all 682):
(articles sorted by number of sources associating them with CCR3)
    Utopia: connect your pdf to the dynamic
world of online information

  1. New variations of human CC-chemokine receptors CCR3 and CCR4. (PubMed id 11196669)1, 2, 4, 9 Kato H.... Tokunaga K. (1999)
  2. Cloning, expression, and characterization of the human eosinophil eotaxin receptor. (PubMed id 8642344)1, 2, 9 Daugherty B.L.... Springer M.S. (1996)
  3. Cloning and functional expression of a human eosinophil CC chemokine receptor. (PubMed id 7622448)1, 2, 9 Combadiere C.... Murphy P.M. (1995)
  4. Genetic polymorphisms of CC chemokine receptor 3 in Japanese and British asthmatics. (PubMed id 11307756)1, 4, 9 Fukunaga K....Yamaguchi K. (2001)
  5. Molecular cloning and characterization of a human eotaxin receptor expressed selectively on eosinophils. (PubMed id 8676064)1, 2, 9 Ponath P.D.... Mackay C.R. (1996)
  6. Association of interleukin 10 haplotype with low bone mineral density in Korean postmenopausal women. (PubMed id 15607028)1, 4, 9 Park B.L....Shin H.D. (2004)
  7. Genetic variants in the CCR gene cluster and spontaneous viral elimination in hepatitis C-infected patients. (PubMed id 15086398)1, 4, 9 Mascheretti S....Schreiber S. (2004)
  8. HIV-1 Tat protein mimicry of chemokines. (PubMed id 9789057)1, 2, 9 Albini A.... Noonan D.M. (1998)
  9. Increased expression of chemokine receptor CCR3 and its ligands in ulcerative colitis: the role of colonic epithelial cells in in vitro studies. (PubMed id 21077277)1, 2 Manousou P.... Kouroumalis E. (2010)
  10. The suggestive association of eotaxin-2 and eotaxin-3 gene polymorphisms in Korean population with allergic rhinitis. (PubMed id 15580493)1, 4 Chae S.C....Chung H.T. (2005)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Disorders
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 1232 HGNC: 1604 AceView: CCR3 Ensembl:ENSG00000183625 euGenes: HUgn1232
ECgene: CCR3 Kegg: 1232 H-InvDB: CCR3

(According to HUGE)
About This Section
  --

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
NameDescription
PharmGKB entry for CCR3 Pharmacogenomics, SNPs, Pathways
Wikipedia http://en.wikipedia.org/wiki/CC_chemokine_receptors

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from LifeMap Sciences, Inc.)
About This Section
Patent Information for CCR3 gene:
Search GeneIP for patents involving CCR3

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section

 
 EMD Millipore Custom Antibody & Bulk Services
 EMD Millipore Preclinical / Clinical Development Services
 EMD Millipore Immunoassay Services
 EMD Millipore Target Screening & Profiling Services

  
 Antibodies for CCR3 (CCR3)   Browse Cell Culture Products  
 Browse ELISAs   Browse Flow Cytometry Kits  
 Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
 Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
 Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
 Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
 Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
 Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
 OriGene Antibodies for CCR3   OriGene shRNA RFP for CCR3  
 OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for CCR3   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for CCR3  
 OriGene Protein Over-expression Lysate for CCR3   Browse OriGene Fluorogenic Cell Assay Kits  
 OriGene siRNA for CCR3   Browse 3'-UTR reporter clones for miRNA target validation  
 OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for CCR3  
 Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
 Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
 Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
 OriGene Custom Antibody Services for CCR3   OriGene Custom Protein Services for CCR3  
 OriGene Custom Immunoassay Development  

 
 
 QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CCR3
 QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing CCR3
 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCR3
 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat CCR3
 QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CCR3
 QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CCR3
 GenScript Custom Purified and Recombinant Proteins Services for CCR3 GenScript cDNA clones with any tag delivered in your preferred vector for CCR3
 GenScript Custom Assay Services for CCR3 GenScript Superior Antibodies for CCR3
 GenScript Custom overexpressing Cell Line Services for CCR3 CloneReady with Over 120,000 Genes
 Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
 Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
 Custom Peptide Services
 Search for Antibodies & Assays

 Regulatory tfbs in CCR3 promoter
 Search Chromatin IP Primers for CCR3
 RT2 qPCR Primer Assay in human, mouse, rat CCR3
 GNC Network for CCR3
 SABiosciences PCR Arrays including human, mouse, rat CCR3
 Tocris compounds for CCR3
 Browse Sino Biological Proteins and Antibodies
 Browse Sino Biological cDNA Clones
 Antibodies/Proteins Production Services
 Rabbit Monoclonal Antibody Platform
 Bulk Purchasing
 Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
 Novus Tissue Slides
 CCR3 antibodies
 CCR3 proteins
 CCR3 lysates
 Antibodies for CCR3
 See all of Abcam's Antibodies, Kits and Proteins for CCR3
 Custom Antibody / Protein Production Service
 Bulk Purchasing
 Advantages of Rabbit Monoclonal antibodies
 Abcam protocols and scientific support
 Browse ProSpec Recombinant Proteins




 CCR3 Proteins, Antibodies, CLIAs, and ELISAs
 Search LifeMap BioReagents cell lines for CCR3
 Gene Synthesis
 Protein Engineering
 Variant Library Synthesis
 Codon Optimization
 Protein Production and Purification
 Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for CCR3
 SwitchGear 3'UTR luciferase reporter plasmids for CCR3
 SwitchGear Promoter luciferase reporter plasmids for CCR3
 ThermoFisher Antibodies for CCR3
 Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat CCR3
 inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for CCR3
Sirion Biotech Customized:
 stable knockdown cell line services for CCR3
 inducible knockdown cell line services for CCR3
 design and validation of potent shRNA sequences against CCR3
 adenovirus for potent knockdown of CCR3
 adenovirus for overexpression of CCR3
 stable overexpressing cell line services for CCR3
 inducible overexpressing cell line services for CCR3
       
GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013 , 14 May 2013

View Random Gene

Category
VWF
(GIFTS: 73)
von Willebrand factor
GIFtS Group
The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes      Disease genes      CCR3 gene at Home site.
hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4