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Aliases for CCNI Gene

Aliases for CCNI Gene

  • Cyclin I 2 3
  • Cyclin ITI 3
  • Cyclin-I 3
  • CCNI1 3
  • CYC1 3
  • CYI 3

External Ids for CCNI Gene

Previous GeneCards Identifiers for CCNI Gene

  • GC04M077878
  • GC04M078159
  • GC04M078361
  • GC04M078427
  • GC04M078326
  • GC04M077968
  • GC04M073720

Summaries for CCNI Gene

Entrez Gene Summary for CCNI Gene

  • The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin shows the highest similarity with cyclin G. The transcript of this gene was found to be expressed constantly during cell cycle progression. The function of this cyclin has not yet been determined. [provided by RefSeq, Jul 2008]

GeneCards Summary for CCNI Gene

CCNI (Cyclin I) is a Protein Coding gene. Among its related pathways are Metabolism and Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein. An important paralog of this gene is CCNI2.

Gene Wiki entry for CCNI Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CCNI Gene

Genomics for CCNI Gene

Regulatory Elements for CCNI Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for CCNI Gene

Start:
77,047,158 bp from pter
End:
77,076,005 bp from pter
Size:
28,848 bases
Orientation:
Minus strand

Genomic View for CCNI Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for CCNI Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CCNI Gene

Proteins for CCNI Gene

  • Protein details for CCNI Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14094-CCNI_HUMAN
    Recommended name:
    Cyclin-I
    Protein Accession:
    Q14094
    Secondary Accessions:
    • B2R6M0
    • B7Z6X4

    Protein attributes for CCNI Gene

    Size:
    377 amino acids
    Molecular mass:
    42557 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for CCNI Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for CCNI Gene

Proteomics data for CCNI Gene at MOPED

Post-translational modifications for CCNI Gene

  • Ubiquitination at Lys18
  • Modification sites at PhosphoSitePlus

Other Protein References for CCNI Gene

No data available for DME Specific Peptides for CCNI Gene

Domains for CCNI Gene

Protein Domains for CCNI Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for CCNI Gene

Graphical View of Domain Structure for InterPro Entry

Q14094

UniProtKB/Swiss-Prot:

CCNI_HUMAN :
  • Q14094
Family:
  • Belongs to the cyclin family.
genes like me logo Genes that share domains with CCNI: view

No data available for Gene Families for CCNI Gene

Function for CCNI Gene

genes like me logo Genes that share phenotypes with CCNI: view

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCNI

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for CCNI Gene

Localization for CCNI Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for CCNI Gene COMPARTMENTS Subcellular localization image for CCNI gene
Compartment Confidence
cytosol 2
nucleus 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for CCNI Gene

Pathways for CCNI Gene

genes like me logo Genes that share pathways with CCNI: view

Gene Ontology (GO) - Biological Process for CCNI Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007283 spermatogenesis NAS 9705831
GO:0051726 regulation of cell cycle IEA --
genes like me logo Genes that share ontologies with CCNI: view

Transcripts for CCNI Gene

Unigene Clusters for CCNI Gene

Cyclin I:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for CCNI

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for CCNI Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8a · 8b · 8c · 8d ^ 9 ^ 10a · 10b · 10c
SP1: - -
SP2: - - - -
SP3: -
SP4: - - - - -
SP5: - - - - - -
SP6: - - - - -
SP7:
SP8: -
SP9: - - - -

Relevant External Links for CCNI Gene

GeneLoc Exon Structure for
CCNI
ECgene alternative splicing isoforms for
CCNI

Expression for CCNI Gene

mRNA expression in normal human tissues for CCNI Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for CCNI Gene

SOURCE GeneReport for Unigene cluster for CCNI Gene Hs.518827

mRNA Expression by UniProt/SwissProt for CCNI Gene

Q14094-CCNI_HUMAN
Tissue specificity: Highest levels in adult heart, brain and skeletal muscle. Lower levels in adult placenta, lung, kidney and pancreas. Also high levels in fetal brain and lower levels in fetal lung, liver and kidney. Also abundant in testis and thyroid.
genes like me logo Genes that share expressions with CCNI: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for CCNI Gene

Orthologs for CCNI Gene

This gene was present in the common ancestor of animals.

Orthologs for CCNI Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia CCNI 35
  • 99.56 (n)
  • 99.47 (a)
CCNI 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia CCNI 35
  • 93.72 (n)
  • 94.96 (a)
CCNI 36
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia CCNI 35
  • 94.96 (n)
  • 97.08 (a)
CCNI 36
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ccni 35
  • 92.75 (n)
  • 93.9 (a)
Ccni 16
Ccni 36
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia CCNI 36
  • 81 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 59 (a)
OneToMany
-- 36
  • 83 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Ccni 35
  • 92.57 (n)
  • 93.1 (a)
chicken
(Gallus gallus)
Aves CCNI 35
  • 79.49 (n)
  • 81.43 (a)
CCNI 36
  • 79 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia CCNI 36
  • 74 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia MGC68660 35
tropical clawed frog
(Silurana tropicalis)
Amphibia ccni 35
  • 71.54 (n)
  • 67.29 (a)
zebrafish
(Danio rerio)
Actinopterygii ccni 35
  • 63.19 (n)
  • 61.45 (a)
ccni 36
  • 57 (a)
OneToOne
Dr.10085 35
fruit fly
(Drosophila melanogaster)
Insecta CycG 36
  • 12 (a)
OneToMany
Species with no ortholog for CCNI:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for CCNI Gene

ENSEMBL:
Gene Tree for CCNI (if available)
TreeFam:
Gene Tree for CCNI (if available)

Paralogs for CCNI Gene

Paralogs for CCNI Gene

Selected SIMAP similar genes for CCNI Gene using alignment to 8 proteins:

genes like me logo Genes that share paralogs with CCNI: view

Variants for CCNI Gene

Sequence variations from dbSNP and Humsavar for CCNI Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs4595 -- 77,058,527(-) TGGAT(A/G/T)GGTTT reference, missense
rs12186 -- 77,047,860(+) AATCA(C/G)GATGC downstream-variant-500B
rs1048417 -- 77,070,861(-) CATTC(A/C)ATTTC intron-variant
rs1132834 -- 77,049,008(-) CCTTC(C/T)AGACA intron-variant
rs1140827 -- 77,048,011(-) AAAAA(A/G)AAATC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for CCNI Gene

Variant ID Type Subtype PubMed ID
nsv7363 OTHER Inversion 18451855
nsv879499 CNV Loss 21882294

Relevant External Links for CCNI Gene

HapMap Linkage Disequilibrium report
CCNI

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for CCNI Gene

Disorders for CCNI Gene

(1) Novoseek inferred disease relationships for CCNI Gene

Disease -log(P) Hits PubMed IDs
breast cancer 6.28 1

Relevant External Links for CCNI

Genetic Association Database (GAD)
CCNI
Human Genome Epidemiology (HuGE) Navigator
CCNI
genes like me logo Genes that share disorders with CCNI: view

No data available for UniProtKB/Swiss-Prot for CCNI Gene

Publications for CCNI Gene

  1. Cyclin I: a new cyclin encoded by a gene isolated from human brain. (PMID: 7493655) Nakamura T. … Mori N. (Exp. Cell Res. 1995) 2 3 4 23
  2. Expression of a novel isoform of cyclin I in human testis. (PMID: 9705831) Zhu X. … Naz R.K. (Biochem. Biophys. Res. Commun. 1998) 3 4 23
  3. Serum proteomic-based analysis of pancreatic carcinoma for the identification of potential cancer biomarkers. (PMID: 17507299) Sun Z.L. … Miao Y. (Biochim. Biophys. Acta 2007) 3 23
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia. (PMID: 17043677) Camargo L.M. … Brandon N.J. (Mol. Psychiatry 2007) 3

Products for CCNI Gene

Sources for CCNI Gene

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