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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

CCNE1 Gene

protein-coding   GIFtS: 67
GCID: GC19P030302

cyclin E1


(Previous symbol: CCNE)
 Explore 71 diseases affiliated with
CCNE1 via our new
 Human Malady Compendium 
Biological research products
for CCNE1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Cyclin E11 2
CCNE1 2 3 5
Cyclin Es2
Cyclin Et2
G1/S-Specific Cyclin-E12

External Ids:    HGNC: 15891   Entrez Gene: 8982   Ensembl: ENSG000001051737   OMIM: 1238375   UniProtKB: P248643   

Export aliases for CCNE1 gene to outside databases

Previous GC identifers: GC19P030925 GC19P030751 GC19P034978 GC19P034994 GC19P026814


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for CCNE1:
The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a
dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases.
Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination
of each mitotic event. This cyclin forms a complex with and functions as a regulatory subunit of CDK2, whose activity
is required for cell cycle G1/S transition. This protein accumulates at the G1-S phase boundary and is degraded as
cells progress through S phase. Overexpression of this gene has been observed in many tumors, which results in
chromosome instability, and thus may contribute to tumorigenesis. This protein was found to associate with, and be
involved in, the phosphorylation of NPAT protein (nuclear protein mapped to the ATM locus), which participates in
cell-cycle regulated histone gene expression and plays a critical role in promoting cell-cycle progression in the
absence of pRB. Two alternatively spliced transcript variants of this gene, which encode distinct isoforms, have been
described. Two additional splice variants were reported but detailed nucleotide sequence information is not yet
available. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: CCNE1_HUMAN, P24864
Function: Essential for the control of the cell cycle at the G1/S (start) transition

Gene Wiki entry for CCNE1 (Cyclin E1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the CCNE1 gene promoter:
         AP-1   ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): CCNE1 promoter sequence
   Search SABiosciences Chromatin IP Primers for CCNE1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCNE1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q12   Ensembl cytogenetic band:  19q12   HGNC cytogenetic band: 19q12

CCNE1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
CCNE1 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P030302:  view genomic region     (about GC identifiers)

Start:
30,302,805 bp from pter      End:
30,315,219 bp from pter
Size:
12,415 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: CCNE1_HUMAN, P24864 (See protein sequence)
Recommended Name: G1/S-specific cyclin-E1  
Size: 410 amino acids; 47077 Da
Subunit: Interacts with a member of the CDK2/CDK protein kinases to form a serine/threonine kinase holoenzyme complex.
The cyclin subunit imparts substrate specificity to the complex. Found in a complex with CDK2, CABLES1 and CCNA1 (By
similarity). Part of a complex consisting of UHRF2, CDK2 and CCNE1. Interacts directly with UHRF2; the interaction
ubiquitinates CCNE1 and appears to occur independently of CCNE1 phosphorylation
Subcellular location: Nucleus
1 PDB 3D structure from and Proteopedia for CCNE1:
1W98 (3D)    
Secondary accessions: A8K684 Q14091 Q8NFG1 Q92501 Q9UD21
Alternative splicing: 3 isoforms:  P24864-1   P24864-2   P24864-3   (Lacks 49 residues within the cyclin box and cannot complex with CDK2)

Explore the universe of human proteins at neXtProt for CCNE1: NX_P24864

Post-translational modifications:

  • Phosphorylation of Thr-395 by GSK3 and of Ser-399 by CDK2 accelerates degradation via the ubiquitin proteasome pathway1
  • Ubiquitinated by UHRF2; appears to occur independently of phosphorylation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P24864

  • CCNE1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_001229.1  
    ENSEMBL proteins: 
     ENSP00000262643   ENSP00000459024   ENSP00000410179   ENSP00000460881   ENSP00000350625  
    Reactome Protein details: P24864
    Human Recombinant Protein Products: 
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    Uscn Proteins for CCNE1

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000307cyclin-dependent protein kinase holoenzyme complex IEA--
    GO:0005634nucleus NAS--
    GO:0005654nucleoplasm TAS--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm ----


    CCNE1 for ontologies           About GeneDecksing



    CCNE1 Antibody Products: 
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    Uscn ELISAs and CLIAs for CCNE1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    CCNE1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR013763 Cyclin-like
     IPR006671 Cyclin_N
     IPR004367 Cyclin_C
     IPR014400 Cyclin_A/B/D/E

    Graphical View of Domain Structure for InterPro Entry P24864

    ProtoNet protein and cluster: P24864

    1 Blocks protein family: IPB006670 Cyclin

    UniProtKB/Swiss-Prot: CCNE1_HUMAN, P24864
    Similarity: Belongs to the cyclin family. Cyclin E subfamily


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: CCNE1_HUMAN, P24864
    Function: Essential for the control of the cell cycle at the G1/S (start) transition

         Genatlas biochemistry entry for CCNE1:
    cyclin E,48kDa,complexing with CDK2,regulating G1 to S transition of the cell cycle,overexpressed in many tumors
    leading to a deregulated levels of protein and kinase activity relative to the cell cycle and inducing chromosome
    instability

    miRNA
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    miRTarBase miRNAs that target CCNE1:
    hsa-mir-103 (MIRT004762), hsa-mir-15b (MIRT000276), hsa-mir-503 (MIRT000646), hsa-mir-107 (MIRT004693), hsa-mir-424 (MIRT000936), hsa-mir-15a (MIRT001228), hsa-mir-185 (MIRT004698), hsa-mir-16 (MIRT001226)

    OriGene 3'-UTR Clone (see all 2): CCNE1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat CCNE1
    8/10 QIAGEN miScript miRNA Assays for microRNAs that regulate CCNE1 (see all 10):
    hsa-miR-15a hsa-miR-503 hsa-miR-497 hsa-miR-646 hsa-miR-103a hsa-miR-424 hsa-miR-16 hsa-miR-195
    SwitchGear 3'UTR luciferase reporter plasmidCCNE1 3' UTR sequence
    Inhib. RNA
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    Clone
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    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003713transcription coactivator activity NAS15572661
    GO:0005515protein binding IPI--
    GO:0016301kinase activity IEA--
    GO:0016538cyclin-dependent protein kinase regulator activity IEA--
    GO:0019901protein kinase binding IEA--


    CCNE1 for ontologies           About GeneDecksing


    4 GenomeRNAi human phenotypes for CCNE1:
     Decreased number of cells in m  G0/1 arrest  Increased G1 DNA content  Increased HPV18 LCR reporter a 

    Animal Models:
         Mouse knock-out Ccne1tm1Pisc for CCNE1
         15/16 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Ccne1) (see all 16):
     behavior/neurological  cardiovascular system  cellular  digestive/alimentary  embryogenesis 
     endocrine/exocrine gland  growth/size  hematopoietic system  immune system  integument 
     mortality/aging  nervous system  normal  reproductive system  skeleton 

    CCNE1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/46 super-pathways (see all 46About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ubiquitinated Orc1 is degraded by the proteasome
    8/10 pathways (see all 10)
    p53-Dependent G1/S DNA damage checkpoint0.83
    Cyclin E associated events during G1/S transition 0.67
    p53-Dependent G1 DNA Damage Response0.83
    Cyclin A:Cdk2-associated events at S phase entry0.66
    G1/S DNA Damage Checkpoints0.79
    Cell Cycle Checkpoints0.42
    Degradation of ubiquitinated p27/p21 by the 26S proteasome0.75
    S Phase0.40
    2Cell cycle_Cell cycle (generic schema)
    Cell cycle_Cell cycle (generic schema)1.00
    Cell cycle Regulation of G1/S transition (part 2)0.38
    Cell cycle Cell cycle (generic schema)1.00
    G0 and Early G10.31
    Cell cycle_Regulation of G1/S transition (part 2)0.38
    3G1/S-Specific Transcription
    G1/S-Specific Transcription1.00
    E2F mediated regulation of DNA replication0.45
    Activation of E2F target genes at G1/S1.00
    4Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway1.00
    Parkin-Ubiquitin Proteasomal System pathway0.93
    Proteolysis_Role of Parkin in the Ubiquitin-Proteasomal Pathway0.93
    5Cell cycle
    Cell cycle1.00
    G1 to S cell cycle control0.38
    Cell cycle0.57

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/10 EMD Millipore Pathways for CCNE1 (see all 10)
        DNA damage ATM/ATR regulation of G1/S checkpoint
    Cell cycle Regulation of G1/S transition (part 2)
    Cell cycle Regulation of G1/S transition (part 1)
    Cell cycle Start of DNA replication in early S phase
    Cell cycle ESR1 regulation of G1/S transition

    5/15 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CCNE1 (see all 15)
        Cell Cycle Control by BTG Proteins
    Factors Promoting Cardiogenesis in Vertebrates
    Molecular Mechanisms of Cancer
    Calpain Protease Regulates Cellular Mechanics
    TOB in T-Cell Signaling

    1 Cell Signaling Technology (CST) Pathway for CCNE1
        Cell Cycle / Checkpoint Control

    5/10 GeneGo (Thomson Reuters) Pathways for CCNE1 (see all 10)
        DNA damage ATM/ATR regulation of G1/S checkpoint
    Transcription Ligand-dependent activation of the ESR1/SP pathway
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Cell cycle Cell cycle (generic schema)
    Cell cycle Role of SCF complex in cell cycle regulation

    5/20 BioSystems Pathways for CCNE1 (see all 20
        Signaling Pathways in Glioblastoma
    G1 to S cell cycle control
    Cell cycle
    Parkinsons Disease Pathway
    DNA damage response

    5/18        Reactome Pathways for CCNE1 (see all 18)
        SCF(Skp2)-mediated degradation of p27/p21
    Mitotic G1-G1/S phases
    G0 and Early G1
    Cell Cycle
    Degradation of ubiquitinated p27/p21 by the 26S proteasome


    5/7         Kegg Pathways  (Kegg details for CCNE1) (see all 7):
        Cell cycle
    Oocyte meiosis
    p53 signaling pathway
    Measles
    Pathways in cancer


    CCNE1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CCNE1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/134 Interacting proteins for CCNE1 (P248641, 2, 3 ENSP000002626434) via UniProtKB, MINT, STRING, and/or I2D (see all 134)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CDK2P249411, 2, 3, ENSP000002669704EBI-519526,EBI-375096 MINT-2983466 I2D: score=10 STRING: ENSP00000266970
    CDKN1BP465271, 3, ENSP000002288724EBI-519526,EBI-519280 I2D: score=3 STRING: ENSP00000228872
    BRCA1P383981, 3, ENSP000003502834EBI-519526,EBI-349905 I2D: score=2 STRING: ENSP00000350283
    UHRF2Q96PU41, 3, ENSP000002768934EBI-519526,EBI-625304 I2D: score=1 STRING: ENSP00000276893
    FBXW7Q969H02, 3, ENSP000002817084MINT-15545 MINT-15544 MINT-14269 I2D: score=5 STRING: ENSP00000281708
    About this table

    Gene Ontology (GO): 5/28 biological process terms (GO ID links to tree view) (see all 28):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000079regulation of cyclin-dependent protein kinase activity IEA--
    GO:0000082G1/S transition of mitotic cell cycle TAS--
    GO:0000083regulation of transcription involved in G1/S phase of mitotic cell cycle TAS--
    GO:0000278mitotic cell cycle TAS--
    GO:0001547antral ovarian follicle growth ----


    CCNE1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    CCNE1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for CCNE1
    4 Novoseek chemical compound relationships for CCNE1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    estrogen 29.5 10 19564413 (2), 17371803 (1), 16929516 (1), 16755028 (1) (see all 5)
    calcium 0 1 16969097 (1)
    progesterone 0 1 17371803 (1)
    serine 0 1 16038965 (1)

    Search CenterWatch for drugs/clinical trials and news about CCNE1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for CCNE1 gene (2 alternative transcripts): 
    NM_001238.2  NM_057182.1  

    Unigene Cluster for CCNE1:

    Cyclin E1
    Hs.244723  [show with all ESTs]
    Unigene Representative Sequence: NM_001238
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000262643(uc002nsn.3 uc002nso.3) ENST00000575243 ENST00000444983
    ENST00000586912 ENST00000576532 ENST00000574121 ENST00000357943

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    SwitchGear 3'UTR luciferase reporter plasmidCCNE1 3' UTR sequence
    Inhib. RNA
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    Clone
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    GenScript: all cDNA clones in your preferred vector (see all 2): CCNE1 (NM_057182)
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat CCNE1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat CCNE1

    Additional cDNA sequence: 

    AK291549.1 BC035498.2 M73812.1 M74093.1 

    8 DOTS entries:

    DT.100022532  DT.211154  DT.100720928  DT.100842149  DT.65284654  DT.100719142  DT.91966702  DT.121419930 

    24/82 AceView cDNA sequences (see all 82):

    M73812 BQ646961 CR601172 CR591189 BX360890 BM045770 NM_057182 NM_001238 
    BE887210 BQ653397 BM793183 BM047945 AW304866 BC035498 BX402709 CR593053 
    AW771831 BX361099 AA628312 BE544205 BX361098 BE867255 BG395682 BX350684 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for CCNE1    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c
    SP1:              -                       -                                                                     
    SP2:                                      -                                                                     
    SP3:                                                                                                            
    SP4:                                                                                                            


    ECgene alternative splicing isoforms for CCNE1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    CCNE1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTGTCTGAAC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See CCNE1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for CCNE1

    SOURCE GeneReport for Unigene cluster: Hs.244723

    UniProtKB/Swiss-Prot: CCNE1_HUMAN, P24864
    Tissue specificity: Highly expressed in testis and placenta. Low levels in bronchial epithelial cells

        SABiosciences Expression via Pathway-Focused PCR Arrays including CCNE1 (see all 9): 
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              Stem Cells in human mouse rat
              Cell Cycle in human mouse rat
              Breast Cancer in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for CCNE1 gene from 8/27 species (see all 27)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves CCNE11 cyclin E1 74.42(n)
    73.75(a)
      426117  NM_001031358.1  NP_001026529.1 
    lizard
    (Anolis carolinensis)
    Reptilia CCNE16
    --
    67(a)
    1 ↔ 1
    GL343299.1(1576162-1586611)
    African clawed frog
    (Xenopus laevis)
    Amphibia L43513.12   -- 75.17(n)    L43513.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BC045842.12   -- 74.76(n)   30188  BC045842.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CycE1 , 3 G1/S transition of mitotic cell cycle
    cyclin-dependent more3
    Cyclin E1
    43(a)3
    52.43(n)1
    49.34(a)1
      35D43
    349241  NM_165125.21  NP_723926.11 
    worm
    (Caenorhabditis elegans)
    Secernentea cye-11 , 3 Expression: seam cells, P lineage, VPC,
    intestinal, more3
    Protein CYE-11
    31(a)3
    47.57(n)1
    33.58(a)1
      I(6788885-6791944)3
    1723991  NM_001025857.11  NP_001021028.11 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons SDS6
    cyclin-SDS
    9(a)
    possible ortholog
    1(5079407-5082520)
    rice
    (Oryza sativa)
    Liliopsida --
    cyclin, putative, expressed
    11(a)
    possible ortholog
    3(6555387-6561025)


    ENSEMBL Gene Tree for CCNE1 (if available)
    TreeFam Gene Tree for CCNE1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for CCNE1 gene
    CCND32  CCNO2  CCNB22  CCNE22  CCNB32  CCNB12  CCND12  CCNA12  
    CCND22  CCNA22  
    2 SIMAP similar genes for CCNE1 using alignment to 5 protein entries:     CCNE1_HUMAN (see all proteins):
    CCNB1    CCNE2

    CCNE1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/290 NCBI SNPs in CCNE1 are shown (see all 290    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1855966401,2
    --30301123(+) TTTTGG/TAAACA 1 -- us2k10--------
    rs1901189241,2
    --30301179(+) GGGGGA/GTTCAG 1 -- us2k10--------
    rs1382432601,2
    --30301275(+) TAAGAA/CCCTGG 1 -- us2k10--------
    rs1816498201,2
    --30301284(+) GGCTCC/TAACTT 1 -- us2k10--------
    rs362253991,2
    C,--30301288(+) CTAAC-/TTCAAG 1 -- us2k10--------
    rs1430334651,2
    --30301380(+) TTTACA/GCACAT 1 -- us2k10--------
    rs1443997921,2
    --30301493(+) CTTTCA/CAATGT 1 -- us2k10--------
    rs362253981,2
    C,--30301535(+) GTCCAG/AGCACT 1 -- us2k13Minor allele frequency- A:0.04WA EA 240
    rs1487599321,2
    --30301541(+) GCACTA/CTGCCA 1 -- us2k10--------
    rs1424066971,2
    --30301609(+) CAGAGA/GGGCAC 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for CCNE1 (30302805 - 30315219 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for CCNE1: --

    SABiosciences Cancer Mutation PCR Assays
    1 SABiosciences qBiomarker Copy Number PCR Array containing CCNE1:
    Oncogenes & Tumor Suppressor Genes 384HC
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    CCNE1 for disorders           About GeneDecksing

    OMIM gene information: 123837    OMIM disorders: --

    20/71 diseases for CCNE1 (see all 71):    About MalaCards
    estrogen-receptor positive breast cancer    diffuse large b-cell lymphoma    facial dermatosis    b-cell lymphomas
    testicular germ cell tumor    clear cell renal cell carcinoma    endophthalmitis    germ cell tumor
    spindle cell sarcoma    phlyctenulosis    malignant peritoneal mesothelioma    chronic endophthalmitis
    urinary bladder cancer    oral squamous cell carcinoma    renal cell carcinoma    clear cell adenocarcinoma
    squamous cell carcinoma    inflammatory bowel disease    papillary thyroid carcinoma    chronic lymphocytic leukemia

    3 diseases from the University of Copenhagen DISEASES database for CCNE1:
    Facial dermatosis     Phlyctenulosis     Chronic endophthalmitis

    10/15 Novoseek disease relationships for CCNE1 gene (see all 15)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    retinoblastoma 51.9 2 16949911 (1), 12674332 (1)
    breast cancer 44.7 21 19777567 (3), 16929516 (2), 16912169 (2), 16849587 (2) (see all 10)
    cancer 44.4 15 16808878 (4), 20180967 (3), 16912169 (2), 19084516 (2) (see all 7)
    tumors 35.9 26 12466974 (3), 16849587 (3), 11687642 (2), 10666388 (2) (see all 16)
    ovarian cancer 32.9 3 18281541 (2), 20336784 (1)
    primary tumor 32.5 1 11854029 (1)
    bladder cancer 30.1 4 10980118 (2), 18008359 (1)
    carcinoma 26.5 3 18047954 (1), 15770521 (1), 18008359 (1)
    hepatocellular carcinoma 14.9 1 19356046 (1)
    lymphoma 8.66 7 11291051 (4)

    Human Genome Epidemiology (HuGE) Navigator: CCNE1 (15 documents)

    Export disorders for CCNE1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for CCNE1 gene, integrated from 9 sources (see all 362):
    (articles sorted by number of sources associating them with CCNE1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Isolation of three novel human cyclins by rescue of G1 cyclin (Cln) function in yeast. (PubMed id 1833066)1, 2, 3 Lew D.J.... Reed S.I. (1991)
    2. Molecular cloning and chromosomal localization of the human cyclin C (CCNC) and cyclin E (CCNE) genes: deletion of the CCNC gene in human tumors. (PubMed id 8833152)1, 2, 9 Li H....Kidd V.J. (1996)
    3. Cyclin E2, a novel human G1 cyclin and activating partner of CDK2 and CDK3, is induced by viral oncoproteins. (PubMed id 9840943)1, 2, 9 Zariwala M.... Xiong Y. (1998)
    4. NIRF constitutes a nodal point in the cell cycle netw ork and is a candidate tumor suppressor. (PubMed id 21952639)1, 2 Mori T....Kochi H. (2011)
    5. NIRF induces G1 arrest and associates with Cdk2. (PubMed id 15178429)1, 2 Li Y.... Kochi H. (2004)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Multisite phosphorylation by Cdk2 and GSK3 controls cyclin E degradation. (PubMed id 14536078)1, 2 Welcker M.... Roberts J.M. (2003)
    8. Activation of cyclin E/CDK2 is coupled to site-specific autophosphorylation and ubiquitin-dependent degradation of cyclin E. (PubMed id 8861947)1, 2 Won K.A. and Reed S.I. (1996)
    9. Regulation of cyclin E transcription by E2Fs and retinoblastoma protein. (PubMed id 8649818)1, 2 Geng Y.... Weinberg R.A. (1996)
    10. Human cyclin E, a nuclear protein essential for the G1-to-S phase transition. (PubMed id 7739542)1, 2 Ohtsubo M.... Pagano M. (1995)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 898 HGNC: 1589 AceView: CCNE1 Ensembl:ENSG00000105173 euGenes: HUgn898
    ECgene: CCNE1 Kegg: 898 H-InvDB: CCNE1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for CCNE1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for CCNE1 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/ccne1/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for CCNE1 gene:
    Search GeneIP for patents involving CCNE1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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