 |
 | Services
| |
 |
Aliases & Descriptions for CCND2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| KIAK0002 2 | | MGC102758 2 |
| | | Descriptions |
|---|
| G1/S-specific cyclin D2 2 | | cyclin D2 2 |
|
| | Search outside databases for aliases for CCND2 genePrevious GC identifers: GC12P004120 GC12P004275 |
Summaries for CCND2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CCND2: The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin forms a complex with and functions as a regulatory subunit of CDK4 or CDK6, whose activity is required for cell cycle G1/S transition. This protein has been shown to interact with and be involved in the phosphorylation of tumor suppressor protein Rb. Knockout studies of the homologous gene in mouse suggest the essential roles of this gene in ovarian granulosa and germ cell proliferation. High level expression of this gene was observed in ovarian and testicular tumors. [provided by RefSeq] UniProtKB/Swiss-Prot: CCND2_HUMAN, P30279Function: Essential for the control of the cell cycle at the G1/S (start) transitionGene Wiki entry for CCND2 (Cyclin_D2) |
Genomic Location for CCND2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CCND2 gene 
Entrez Gene cytogenetic band: 12p13 Ensembl cytogenetic band: 12p13.32 HGNC cytogenetic band: 12p13CCND2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure GeneLoc location for GC12P004253:
(about GC identifiers)
Start:
|
4,253,199 bp from pter |
End:
|
4,284,777 bp from pter |
Size:
|
31,579 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000012.10 NT_009759.15
| Proteins for CCND2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CCND2_HUMAN, P30279 (See
protein sequence)Recommended Name: G1/S-specific cyclin-D2 Size: 289 amino acids; 33067 Da
Subunit: Interacts with the CDK4 and CDK6 protein kinases to form a serine/threonine kinase holoenzyme complex. The cyclin subunit imparts substrate specificity to the complex
Secondary accessions: Q13955 Q5U035Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001750.1
ENSEMBL proteins: ENSP00000261254
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: CCND2 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0000307 | cyclin-dependent protein kinase holoenzyme complex |
IDA | 8114739 | | GO:0005634 | nucleus |
IEA | -- | About this table
Antibodies for CCND2: Assays for CCND2: | Protein
Domains/ Families for CCND2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P30279
ProtoNet protein and cluster: P30279 1 Blocks protein family: IPB006670 Cyclin
UniProtKB/Swiss-Prot: CCND2_HUMAN, P30279Similarity: Belongs to the cyclin family. Cyclin D subfamily | Gene Function for CCND2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001759
Applied Biosystems Silencer® siRNAs for CCND2
Sigma-Aldrich siRNA and siRNA Panels for CCND2  Sigma-Aldrich shRNA Panels and shRNA for CCND2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001759                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001759                                  untagged cDNA clone in CMV expression vector: NM_001759 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001759
UniProtKB/Swiss-Prot: CCND2_HUMAN, P30279Function: Essential for the control of the cell cycle at the G1/S (start) transitionGenatlas biochemistry entry for CCND2:cyclin D2,regulator of progression through G1 phase during the cell cycle 2,FSH responsive,involved in gonadal cell proliferation and oncogenesis,overexpressed in astrocytomas and in glioblastomas12 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Ccnd2):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CCND2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5 Sigma-Aldrich "Your Favorite Gene" Pathways for CCND2 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for CCND2 
5/72 Interacting proteins for CCND2 (P302791, 2 ENSP000002612543) via UniProtKB, MINT, and/or STRING (see all 72
)About this table
5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0000082 | G1/S transition of mitotic cell cycle |
IEA | -- | | GO:0001934 | positive regulation of protein amino acid phosphorylation |
IDA | 8114739 | | GO:0008284 | positive regulation of cell proliferation |
IEA | -- | | GO:0045737 | positive regulation of cyclin-dependent protein kinase activity |
IDA | 8114739 | | GO:0051301 | cell division |
IEA | -- | About this table
|
Drugs & Compounds for CCND2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for CCND2 |
Browse Tocris compounds for CCND2 10/11 Novoseek chemical compound relationships for CCND2 gene (see all 11
)
About this table
|
Transcripts for CCND2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001759
Sigma-Aldrich siRNA and siRNA Panels for CCND2  Sigma-Aldrich shRNA Panels and shRNA for CCND2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001759 REFSEQ mRNAs for CCND2 gene: NM_001759.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001759               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001759                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001759                                  untagged cDNA clone in CMV expression vector: NM_001759  Additional cDNA sequence: AK223577.1 AK291146.1 BC010958.1 BC014357.1 BC089384.1 BT019847.1 BX647508.1 CR600898.1 D13639.1 M90813.1 X68452.1 16 DOTS entries: DT.95139513 DT.418769 DT.100027257 DT.97825041 DT.75193426 DT.121197504 DT.70100480 DT.100643619 DT.121197494 DT.121197513 DT.95263984 DT.121197523 DT.121197541 DT.75100426 DT.95177141 DT.95263988 24/470 AceView cDNA sequences (see all 470
):BM663326 AW365080 AA327695 H40179 BG287657 AW337771 BP344026 CR600898 AA247822 NM_001759 BQ574704 AA485301 BF172298 X68452 BM720660 BF089595 AI633881 AA885870 BP375742 AA977482 T28541 AI083619 BQ954071 AI650875
highest scoring ESTs for CCND2:AW026491 D13639 X68452 AA011227 AA136888 AA136999 AA225568 AA322340 AA327873 AA361211 Unigene Cluster for CCND2: Cyclin D2 Hs.376071 [show with all ESTs]Unigene Representative Sequence: NM_001759
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000261254
|
Expression for CCND2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CCND2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CCND2
1 / 2 / 3 11 probe-sets matching CCND2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: ATATAGTCAG
SOURCE GeneReport for Unigene cluster: Hs.376071
Expression variation in blood from EXPOLDB for CCND2 |
Orthologs for CCND2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CCND2 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for CCND2
ENSEMBL Gene Tree for CCND2 | Paralogs for CCND2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CCND2 gene
- CCND32 CCND12
|
SNPs/Variants for CCND2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CCND2 (up to first 250kb)
|
Disorders & Mutations for CCND2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 123833
10/52 Novoseek disease relationships for CCND2 gene (see all 52
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| retinoblastoma |
73.38 |
17 |
7784057 (1), 19145199 (1), 17897300 (1), 9103470 (1) (see all 17) |
| leukemia t-cell |
64.64 |
3 |
11314046 (1), 15169570 (1) |
| carcinoma embryonal |
55.05 |
5 |
12777997 (2), 9056671 (1), 18930031 (1) |
| tumors |
53.48 |
59 |
10666388 (3), 14581343 (2), 18661512 (2), 10935479 (2) (see all 39) |
| seminoma |
52.85 |
4 |
9056671 (1), 15747581 (1), 14612934 (1) |
| lymphoma |
49.53 |
17 |
11291051 (3), 18391076 (1), 16393687 (1), 16424013 (1) (see all 8) |
| medulloblastoma |
47.71 |
3 |
12959442 (1), 19164512 (1) |
| myeloma |
47.00 |
13 |
18431519 (3), 9565604 (2), 11552984 (1), 19196658 (1) (see all 6) |
| burkitt lymphoma |
43.22 |
3 |
8455931 (1), 8045261 (1) |
| cancer |
42.98 |
22 |
14581343 (3), 10547574 (3), 7784057 (1), 17270028 (1) (see all 15) |
About this table
1 PharmGKB disease relationship for CCND2 geneAbout this table
Human Genome Epidemiology Navigator: CCND2 (8 documents) Tumor Gene Database: CCND2
|
Medical News for CCND2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CCND2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/409 PubMed articles for CCND2 gene (see all 409
):- Genomic organization, chromosomal localization, and independent expression of human cyclin D genes. (PubMed id 1386335)1, 2, 3, 4 Inaba T....Look A.T. (1992)
- Cyclins D1 and D2 are differentially expressed in human B-lymphoid cell lines. (PubMed id 8455931)1, 3, 4 Palmero I.... Peters G. (1993)
- Molecular cloning and chromosomal mapping of CCND genes encoding human D-type cyclins. (PubMed id 1386336)1, 3, 4 Xiong Y....Ward D.C. (1992)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- FoxO3a and BCR-ABL regulate cyclin D2 transcription through a STAT5/BCL6-dependent mechanism. (PubMed id 15509806)1, 3 Fernandez de Mattos S....Lam E.W. (2004)
- Absence of cyclin D2 expression is associated with promoter hypermethylation in gastric cancer. (PubMed id 12771922)1, 3 Yu J....Sung J.J. (2003)
- Deregulation of cyclin D2 by juxtaposition with T-cell receptor alpha/delta locus in t(12;14)(p13;q11)-positive childhood T-cell acute lymphoblastic leukemia. (PubMed id 16548914)1, 3 Karrman K....Johansson B. (2006)
- Glycogen synthase kinase-3beta and p38 phosphorylate cyclin D2 on Thr280 to trigger its ubiquitin/proteasome-dependent degradation in hematopoietic cells. (PubMed id 17486076)1, 3 Kida A....Miura O. (2007)
- Inactivation of cyclin D2 gene in prostate cancers by aberrant promoter methylation. (PubMed id 14581343)1, 3 Padar A....Gazdar A.F. (2003)
- Loss of cyclin D2 expression in the majority of breast cancers is associated with promoter hypermethylation. (PubMed id 11289162)1, 3 Evron E....Sukumar S. (2001)
|
Search for CCND2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CCND2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CCND2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CCND2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CCND2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CCND2:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for CCND2  (Cyclin D2) |
| | | | Search Tocris compounds for CCND2 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|