CCL2 Gene
protein-coding GIFtS : 70
GCID: GC17 P032582
chemokine (C-C motif) ligand 2 (Previous names: small inducible cytokine A2 (monocyte chemotactic protein... ) (Previous symbol: SCYA2 )
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Aliasesfor CCL2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Chemokine (C-C Motif) Ligand 2 1 2 Monocyte Chemotactic And Activating Factor2 3 MCAF1 2 3 5 Monocyte Chemotactic Protein 12 3 MCP11 2 3 5 Monocyte Secretory Protein JE2 3 SCYA21 2 3 5 Small-Inducible Cytokine A22 3 HC111 2 3 MGC94341 MCP-11 2 3 HSMCR302 GDCF-21 2 C-C Motif Chemokine 22 SMC-CF1 2 Monocyte Chemoattractant Protein-12 Small Inducible Cytokine A2 (Monocyte Chemotactic Protein 1, Homologous ToMouse Sig-Je)1 2 Small Inducible Cytokine Subfamily A (Cys-Cys), Member 22 Monocyte Chemoattractant Protein 12 3
Export aliases for CCL2 gene to outside databases Previous GC identifers: GC17P032352 GC17P034621 GC17P032727 GC17P029606 GC17P028767
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Summariesfor CCL2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for CCL2 : This gene is one of several cytokine genes clustered on the q-arm of chromosome 17. Cytokines are a family of secreted proteins involved in immunoregulatory and inflammatory processes. The protein encoded by this gene is structurally related to the CXC subfamily of cytokines. Members of this subfamily are characterized by two cysteines separated by a single amino acid. This cytokine displays chemotactic activity for monocytes and basophils but not for neutrophils or eosinophils. It has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis and atherosclerosis. It binds to chemokine receptors CCR2 and CCR4. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: CCL2_HUMAN, P13500 Function : Chemotactic factor that attracts monocytes and basophils but not neutrophils or eosinophils. Augmentsmonocyte anti-tumor activity. Has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis or atherosclerosis. May be involved in the recruitment of monocytes into the arterial wall during the disease process of atherosclerosis Gene Wiki entry for CCL2
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Genomic Viewsfor CCL2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000017.10 NC_018928.1 NT_010799.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the CCL2 gene promoter: c-Fos STAT1 AP-1 c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for CCL2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCL2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 17q11.2-q12 Ensembl cytogenetic band: 17q12 HGNC cytogenetic band: 17q11.2-q21.1 CCL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17P032582: view genomic region
(about GC identifiers )
Start:
32,582,237 bp from pter
End:
32,584,222 bp from pter
Size:
1,986 bases
Orientation:
plus strand
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Proteinsfor CCL2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: CCL2_HUMAN, P13500 (See
protein sequence )Recommended Name: C-C motif chemokine 2 precursor Size : 99 amino acids; 11025 Da
Subunit : Monomer or homodimer; in equilibrium. Binds to CCR2 and CCR4. Is tethered on endothelial cells byglycosaminoglycan (GAG) side chains of proteoglycans
Subcellular location : Secreted
6/10 PDB 3D structures from and Proteopedia for CCL2 (see all 10 ):1DOK (3D)
  1DOL (3D)
  1DOM (3D)
  1DON (3D)
  1MCA (3D)
  1ML0 (3D)
 
Secondary accessions : B2R4V3 Q9UDF3Explore the universe of human proteins at neXtProt for CCL2: NX_P13500 Post-translational modifications:
Processing at the N-terminus can regulate receptor and target cell selectivity. Deletion of the N-terminal residue converts it from an activator of basophil to an eosinophil chemoattractant1
View neXtProt modification sites for NX_P13500 CCL2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_002973.1 ENSEMBL proteins: ENSP00000462156 ENSP00000225831 Reactome Protein details: P13500 Human Recombinant Protein Products: Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view) : About this table
CCL2 for ontologies About GeneDecksing CCL2 Antibody Products: Assay Products for CCL2:
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Protein
Domains / Familiesfor CCL2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
CCL2 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P13500 ProtoNet protein and cluster: P13500
1 Blocks protein family : IPB000827 Small chemokine UniProtKB/Swiss-Prot: CCL2_HUMAN, P13500 Similarity : Belongs to the intercrine beta (chemokine CC) family
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Functionfor CCL2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: CCL2_HUMAN, P13500 Function : Chemotactic factor that attracts monocytes and basophils but not neutrophils or eosinophils. Augmentsmonocyte anti-tumor activity. Has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis or atherosclerosis. May be involved in the recruitment of monocytes into the arterial wall during the disease process of atherosclerosis
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CCL2 (NM_002982 ) Sino Biological Human cDNA Clone for CCL2 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CCL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CCL2
Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7 ): About this table
CCL2 for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for CCL2 :Animal Models: Mouse knock-outs for CCL2: Ccl2 tm1Lex Ccl2 tm1Rol Ccl2 tm1.1Tyos 15/20 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Ccl2) (see all 20 ):
CCL2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor CCL2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/30 super-pathways (see all 30 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 PEDF Induced Signaling 2 TGF-Beta Pathway 3 Class A/1 (Rhodopsin-like receptors) 4 Akt Signaling 5 Rho Family GTPases
Pathway sources See GeneCards unified pathways Show all pathways 3 EMD Millipore Pathways for CCL2 1 R&D Systems Pathway for CCL2 5/30 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for CCL2 (see all 30 )3 GeneGo (Thomson Reuters) Pathways for CCL2 5 BioSystems Pathways for CCL2 5/11
Reactome Pathways for CCL2 (see all 11 )5/7
Kegg Pathways (Kegg details for CCL2) (see all 7 ):
CCL2 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for CCL2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)51 Interacting proteins for CCL2 (P13500 3 ENSP00000225831 4 ) via UniProtKB, MINT, STRING , and/or I2D (see top 5 )Interactant Interaction Details GeneCard External ID(s) CCBP2 O00590 3 , ENSP00000273145 4 I2D:
score=3 STRING: ENSP00000273145 CCR3 P51677 3 , ENSP00000350003 4 I2D:
score=2 STRING: ENSP00000350003 CCL11 P51671 3 , ENSP00000302234 4 I2D:
score=1 STRING: ENSP00000302234 CCR10 P46092 3 , ENSP00000332504 4 I2D:
score=1 STRING: ENSP00000332504 MMP1 P03956 3 , ENSP00000322788 4 I2D:
score=1 STRING: ENSP00000322788 MMP8 P22894 3 , ENSP00000236826 4 I2D:
score=1 STRING: ENSP00000236826 PCNA P12004 3 , ENSP00000368438 4 I2D:
score=1 STRING: ENSP00000368438 CCR2 P41597 3 , ENSP00000292301 4 I2D:
score=1 STRING: ENSP00000292301 CCR1 P32246 3 , ENSP00000296140 4 I2D:
score=3 STRING: ENSP00000296140 DARC Q16570 3 , ENSP00000357103 4 I2D:
score=4 STRING: ENSP00000357103 MMP3 P08254 3 , ENSP00000299855 4 I2D:
score=1 STRING: ENSP00000299855 CCL5 P13501 3 , ENSP00000293272 4 I2D:
score=1 STRING: ENSP00000293272 CCR5 P51681 3 , ENSP00000292303 4 I2D:
score=2 STRING: ENSP00000292303 CCRL1 Q9NPB9 3 , ENSP00000249887 4 I2D:
score=2 STRING: ENSP00000249887 VCAN P13611 3 , ENSP00000265077 4 I2D:
score=4 STRING: ENSP00000265077 CDC45 O75419 3 , ENSP00000263201 4 I2D:
score=1 STRING: ENSP00000263201 CDC6 Q99741 3 , ENSP00000209728 4 I2D:
score=1 STRING: ENSP00000209728 MCM2 P49736 3 , ENSP00000265056 4 I2D:
score=1 STRING: ENSP00000265056 MCM3 P25205 3 , ENSP00000229854 4 I2D:
score=1 STRING: ENSP00000229854 MCM7 P33993 3 , ENSP00000307288 4 I2D:
score=1 STRING: ENSP00000307288 ORC2 Q13416 3 , ENSP00000234296 4 I2D:
score=1 STRING: ENSP00000234296 ORC4 O43929 3 , ENSP00000264169 4 I2D:
score=1 STRING: ENSP00000264169 CCL13 Q99616 3 I2D:
score=1 CCL8 P80075 3 I2D:
score=1 MMP12 P39900 3 I2D:
score=1 ATF4 ENSP00000336790 4 STRING: ENSP00000336790 CCL17 ENSP00000219244 4 STRING: ENSP00000219244 CCL22 ENSP00000219235 4 STRING: ENSP00000219235 CCL7 ENSP00000200307 4 STRING: ENSP00000200307 FOSL1 ENSP00000310170 4 STRING: ENSP00000310170 IL12B ENSP00000231228 4 STRING: ENSP00000231228 IL12RB1 ENSP00000314425 4 STRING: ENSP00000314425 IL23A ENSP00000228534 4 STRING: ENSP00000228534 IL23R ENSP00000321345 4 STRING: ENSP00000321345 JAK2 ENSP00000371067 4 STRING: ENSP00000371067 JUN ENSP00000360266 4 STRING: ENSP00000360266 TYK2 ENSP00000264818 4 STRING: ENSP00000264818 CCR4 ENSP00000332659 4 STRING: ENSP00000332659 CCR6 ENSP00000339393 4 STRING: ENSP00000339393 CCR7 ENSP00000246657 4 STRING: ENSP00000246657 CCR8 ENSP00000326432 4 STRING: ENSP00000326432 CCR9 ENSP00000350256 4 STRING: ENSP00000350256 CX3CR1 ENSP00000382166 4 STRING: ENSP00000382166 CXCR1 ENSP00000295683 4 STRING: ENSP00000295683 CXCR2 ENSP00000319635 4 STRING: ENSP00000319635 CXCR3 ENSP00000362795 4 STRING: ENSP00000362795 CXCR4 ENSP00000386884 4 STRING: ENSP00000386884 CXCR5 ENSP00000292174 4 STRING: ENSP00000292174 CXCR6 ENSP00000304414 4 STRING: ENSP00000304414 XCR1 ENSP00000310405 4 STRING: ENSP00000310405 CCL4 ENSP00000250151 4 STRING: ENSP00000250151
About this table Gene Ontology (GO): 5/68 biological process terms (GO ID links to tree view) (see all 68 ): About this table
CCL2 for ontologies About GeneDecksing
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Drugs & Compoundsfor CCL2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
CCL2 for compounds About GeneDecksing Browse Tocris compounds for CCL2 3 HMDB Compounds for CCL2 About this table 2 DrugBank Compounds for CCL2 About this table 10/150 Novoseek chemical compound relationships for CCL2 gene (see all 150 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
rantes
96
1626
11750041 (8), 8616572 (7), 15631778 (7), 17353158 (7) (see all 99 )
mcp 1
85
69
20497022 (5), 16091493 (4), 18045859 (3), 20032813 (3) (see all 34 )
ccl3
83.4
145
20047691 (5), 16105698 (5), 18070228 (4), 18270300 (4) (see all 81 )
groalpha
79.1
60
10540194 (4), 16213701 (4), 16869002 (4), 15044249 (3) (see all 30 )
tarc
71
41
12911508 (2), 19536139 (2), 14630994 (2), 11533168 (2) (see all 24 )
grogamma
70.8
8
15832427 (2), 10467937 (2), 15972545 (1), 11808935 (1) (see all 5 )
vegf
66.3
386
14574083 (8), 15627719 (7), 16273763 (6), 18385799 (6) (see all 99 )
mip 1alpha
64.7
9
20205697 (2), 16211583 (1), 15932509 (1), 19506561 (1) (see all 8 )
grobeta
62.7
6
15832427 (2), 12556377 (1), 11808935 (1), 17442617 (1)
bindarit
56.9
13
18827968 (4), 10477401 (2), 17460736 (1), 9507220 (1)
Search CenterWatch for drugs/clinical trials and news about CCL2
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Transcriptsfor CCL2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for CCL2 gene: NM_002982.3 Unigene Cluster for CCL2:
Chemokine (C-C motif) ligand 2 Hs.303649 [show with all ESTs ] Unigene Representative Sequence: BU570769 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000578429 ENST00000580907 ENST00000225831 (uc002hhy.3 ) ENST00000582017 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: CCL2 (NM_002982 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for CCL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CCL2
Additional cDNA sequence: AK311308.1 AK311960.1 BC009716.1 BT007329.1 M24545.1 M28226.1 S69738.1 S71513.1 X14768.1
5 DOTS entries : DT.217745 DT.100795505
DT.100795508 DT.100795510 DT.91845238 24/231 AceView cDNA sequences (see all 231 ):
R80529 AL697816 NM_002982 CK902136 BI793067 AA047099 AW772091 AI075862 S71513 AI692798 CK902135 AI817756 AW241657 BC009716 BE671641 BQ224954 BM708613 X14768 AI927247 AI097531 BF850412 AW849229 BM704915 BE858648 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for CCL2 About this scheme ExUns: 1a · 1b ^ 2 ^ 3a · 3b SP1 :           SP2 :          
ECgene alternative splicing isoforms for CCL2
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Expression for CCL2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section CCL2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GTACTAGTGT
About this image CCL2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See CCL2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for CCL2 SOURCE GeneReport for Unigene cluster: Hs.303649 SABiosciences Expression via Pathway-Focused PCR Arrays including CCL2 (see all 29 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CCL2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat CCL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CCL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CCL2
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Orthologsfor CCL2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for CCL2 gene from 1/8 species (see all 8 ) About this table
ENSEMBL Gene Tree for CCL2 (if available)TreeFam Gene Tree for CCL2 (if available)
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Paralogsfor CCL2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for CCL2 gene CCL15 2 CCL16 2 CCL14 2 CCL24 2 CCL4L1 2 CCL11 2 CCL7 2 CCL4L2 2 CCL3L1 2 CCL5 2 CCL23 2 CCL3L3 2 CCL4 2 CCL8 2 CCL13 2 CCL26 2 CCL3 2 CCL18 2 18/27 SIMAP similar genes for CCL2 using alignment to 2 protein entries: CCL2_HUMAN (see all proteins )
(see all similar genes ):MCP1 CCL11 CCL8 CCL7 MCP-3 CCL13 CCL3L1 CCL3L3 CCL4 CCL4L2 LOC728835 CCL4L1 CCL3 CX3CL1 CCL18 CCL26 CCL14 CCL1
CCL2 for paralogs About GeneDecksing
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Genomic Variantsfor CCL2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: CCL2_HUMAN, P13500 Polymorphism : Genetic variations in CCL2 determine Mycobacterium tuberculosis susceptibility [MIM:607948]
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 17 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for CCL2 (32582237 - 32584222 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for CCL2: -- Human Gene Mutation Database (HGMD) : CCL2 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CCL2
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Disorders
/ Diseasesfor CCL2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
CCL2 for disorders About GeneDecksing OMIM gene information: 158105 OMIM disorders : 609423 182940 607948 20/353 diseases for CCL2 (see all 353 ): About MalaCards rheumatoid arthritis erdheim-chester disease alpha 1-antitrypsin deficiency tick-borne encephalitis psoriasis pulmonary alveolar proteinosis adult-onset still's disease atherosclerosis steroid-resistant nephrotic syndrome relapsing-remitting multiple sclerosis arthritis periapical granuloma coronary artery disease, modifier of venezuelan equine encephalitis spina bifida hermansky-pudlak syndrome arterial occlusive disease hypersensitivity reaction type ii disease migraine without aura sympathetic ophthalmia 15 diseases from the University of Copenhagen DISEASES database for CCL2 :Atherosclerosis Kidney disease Diabetes mellitus Arthritis Heart disease Hypersensitivity reaction type II disease Asthma Cancer Multiple sclerosis Connective tissue disease Hypertension Pneumonia Interstitial lung disease Endometriosis Encephalitis 10/96 Novoseek disease relationships for CCL2 gene (see all 96 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
inflammation
86.3
568
15104334 (4), 11739289 (4), 17977946 (4), 7891256 (3) (see all 99 )
necrosis
82.7
1069
15626982 (5), 7635182 (3), 15223398 (3), 16407046 (3) (see all 99 )
atherosclerosis
79.6
284
17521622 (5), 15894320 (4), 15519012 (4), 12578870 (3) (see all 99 )
tumors
67.6
1198
15883814 (5), 9111518 (5), 16278381 (5), 15626982 (5) (see all 99 )
atherosclerotic plaque
65.6
35
14739122 (2), 16934270 (1), 19566488 (1), 19656094 (1) (see all 23 )
bronchoalveolar lavage fluid
56.3
42
8890891 (3), 10515417 (2), 10489845 (2), 8616572 (1) (see all 30 )
rheumatoid arthritis
56.3
60
16740681 (3), 12826377 (2), 11411959 (2), 14626631 (2) (see all 40 )
lupus nephritis
53.8
45
11780369 (7), 8558841 (6), 16334978 (4), 15119544 (2) (see all 17 )
cardiovascular diseases
53.7
39
19566488 (3), 15030267 (3), 15627719 (2), 11919402 (1) (see all 20 )
insulin resistance
53.6
86
18762729 (5), 15349727 (4), 19361458 (4), 15063799 (3) (see all 33 )
Genetic Association Database (GAD): CCL2 Human Genome Epidemiology (HuGE) Navigator: CCL2 (260 documents) Export disorders for CCL2 gene to outside databases
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Publicationsfor CCL2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for CCL2 gene, integrated from 9 sources (see all 3690 ): (articles sorted by number of sources associating them with CCL2) Utopia : connect your pdf to the dynamic world of online information
A functional promoter polymorphism in monocyte chemoattractant protein-1 is associated with increased susceptibility to pulmonary tuberculosis. (PubMed id 16352737) 1 , 2 , 4, 9 Flores-Villanueva P.O.... Granados J. (2005) Polymorphism of the monocyte chemoattractant protein (MCP-1) gene is associated with the plasma level of MCP-1 but not with carotid intima-media thickness. (PubMed id 14620921) 1 , 4, 9 Tabara Y....Miki T. (2003) CCL2 polymorphisms are associated with serum monocyte chemoattractant protein-1 levels and myocardial infarction in the Framingham Heart Study. (PubMed id 16116069) 1 , 4, 9 McDermott D.H....Benjamin E.J. (2005) MCP-1 gene (SCYA2) and schizophrenia: a case-control association study. (PubMed id 15389752) 1 , 4, 9 Mundo E....Gennarelli M. (2005) Monocyte chemoattractant protein-1 (MCP-1) gene polymorphism and risk of Alzheimer's disease in Italians. (PubMed id 15288699) 1 , 4, 9 Pola R....Pola P. (2004) Caucasian patients with type 2 diabetes mellitus have elevated levels of monocyte chemoattractant protein-1 that are not influenced by the -2518 A-->G promoter polymorphism. (PubMed id 16050950) 1 , 4, 9 Zietz B....Schaffler A. (2005) Association study of functional genetic variants of innate immunity related genes in celiac disease. (PubMed id 16078996) 1 , 4, 9 Rueda B....Koeleman B.P. (2005) MCP-1 gene regulatory region polymorphism in Chinese children with mild, moderate and near-fatal asthma. (PubMed id 15005768) 1 , 4, 9 Yao T.C....Huang J.L. (2004) Polymorphism of monocyte chemoattractant protein 1 in Crohn's disease. (PubMed id 12904997) 1 , 4, 9 Herfarth H....Rogler G. (2003) Polymorphism in the gene regulatory region of MCP-1 is associated with asthma susceptibility and severity. (PubMed id 11544456) 1 , 4, 9 Szalai C....Falus A. (2001)
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External Searches for CCL2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing CCL2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing CCL2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing CCL2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for CCL2 gene: Search GeneIP for patents involving CCL2 Licensable Technologies for CCL2 gene: GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor CCL2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for CCL2 OriGene shRNA RFP for CCL2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for CCL2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for CCL2 OriGene Protein Over-expression Lysate for CCL2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for CCL2 OriGene 3'-UTR Clone for CCL2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for CCL2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for CCL2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for CCL2 OriGene Custom Protein Services for CCL2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat CCL2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing CCL2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat CCL2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat CCL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat CCL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat CCL2
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Recombinant Protein for CCL2
CCL2 Proteins, Antibodies, CLIAs, and ELISAs
ThermoFisher Antibody for CCL2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat CCL2
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